RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 LOC110117498A0A087WWA1 95 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 BORCS7-ASMTA0A0B4J1R7 106 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 hDV103S1A0JD37 113 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 SPRR1AP35321 89 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 RPL39P62891 51 aaKnown RBP1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 Q5XG85 94 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 RAB37Q96AX2 223 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 C20orf78Q9BR46 151 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 ORMDL1Q9P0S3 153 aa1.82□□□□□ -2.12
TRAPPC9-216ENST00000634178 FABP2P12104 132 aa1.81□□□□□ -2.12
TRAPPC9-216ENST00000634178 IFI27P40305 119 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC9-216ENST00000634178 GNG4P50150 75 aa1.81□□□□□ -2.12
TRAPPC9-216ENST00000634178 SEC11AP67812 179 aa1.81□□□□□ -2.12
TRAPPC9-216ENST00000634178 TMEM141Q96I45 108 aa1.81□□□□□ -2.12
TRAPPC9-216ENST00000634178 TOMM7Q9P0U1 55 aa1.81□□□□□ -2.12
TRAPPC9-216ENST00000634178 UMAD1C9J7I0 102 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 INE1O15225 51 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 RPL7L1Q6DKI1 246 aaKnown RBP1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 TEN1Q86WV5 123 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 KCNRGQ8N5I3 272 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 AMELXQ99217 191 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 C2orf88Q9BSF0 95 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 MANBALQ9NQG1 85 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 SPANXCQ9NY87 97 aa1.8□□□□□ -2.12
TRAPPC9-216ENST00000634178 TRBV20-1A0A075B6N2 111 aa1.79□□□□□ -2.12
TRAPPC9-216ENST00000634178 A0A1B0GUT8 65 aa1.79□□□□□ -2.12
TRAPPC9-216ENST00000634178 COX17Q14061 63 aa1.79□□□□□ -2.12
TRAPPC9-216ENST00000634178 SMIM2Q9BVW6 85 aa1.79□□□□□ -2.12
TRAPPC9-216ENST00000634178 KCNQ1DNQ9H478 68 aa1.79□□□□□ -2.12
TRAPPC9-216ENST00000634178 CDC42SE1Q9NRR8 79 aa1.79□□□□□ -2.12
TRAPPC9-216ENST00000634178 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
TRAPPC9-216ENST00000634178 ATP11AUNQ6ZP68 121 aa1.78□□□□□ -2.12
TRAPPC9-216ENST00000634178 CDKN2A-AS1Q9UH64 79 aa1.78□□□□□ -2.12
TRAPPC9-216ENST00000634178 ETDCA0A1B0GVM5 59 aa1.77□□□□□ -2.13
TRAPPC9-216ENST00000634178 ALKAL2Q6UX46 152 aa1.77□□□□□ -2.13
TRAPPC9-216ENST00000634178 LINC00299Q6ZSB3 139 aa1.77□□□□□ -2.13
TRAPPC9-216ENST00000634178 COX7B2Q8TF08 81 aa1.77□□□□□ -2.13
TRAPPC9-216ENST00000634178 TRBV7-6A0A0J9YX20 115 aa1.76□□□□□ -2.13
TRAPPC9-216ENST00000634178 HIGD1CA8MV81 97 aa1.76□□□□□ -2.13
TRAPPC9-216ENST00000634178 F8W1H4 67 aa1.76□□□□□ -2.13
TRAPPC9-216ENST00000634178 C9orf153Q5TBE3 101 aa1.76□□□□□ -2.13
TRAPPC9-216ENST00000634178 SFTA2Q6UW10 78 aa1.76□□□□□ -2.13
TRAPPC9-216ENST00000634178 FAM213BQ8TBF2 198 aa1.76□□□□□ -2.13
TRAPPC9-216ENST00000634178 PRELID3AQ96N28 172 aa1.76□□□□□ -2.13
TRAPPC9-216ENST00000634178 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 A6NN06 94 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 H3BRM9 83 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 K7EMI3 77 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 FABP4P15090 132 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 COX7CP15954 63 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 SPRR1BP22528 89 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 CKS2P33552 79 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 RPS28P62857 69 aaKnown RBP1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 Q6ZRX8 168 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 GNG13Q9P2W3 67 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 ERG28Q9UKR5 140 aa1.75□□□□□ -2.13
TRAPPC9-216ENST00000634178 FXYD6-FXYD2A0A087WZ82 144 aa1.74□□□□□ -2.13
TRAPPC9-216ENST00000634178 J3KT08 172 aa1.74□□□□□ -2.13
TRAPPC9-216ENST00000634178 S100A12P80511 92 aa1.74□□□□□ -2.13
TRAPPC9-216ENST00000634178 D6R8Y8 96 aa1.73□□□□□ -2.13
TRAPPC9-216ENST00000634178 SPRR2EP22531 72 aa1.73□□□□□ -2.13
TRAPPC9-216ENST00000634178 SPRR2BP35325 72 aa1.73□□□□□ -2.13
TRAPPC9-216ENST00000634178 SPRR2AP35326 72 aa1.73□□□□□ -2.13
TRAPPC9-216ENST00000634178 Q5BKY6 102 aa1.73□□□□□ -2.13
TRAPPC9-216ENST00000634178 HRCT1Q6UXD1 115 aa1.73□□□□□ -2.13
TRAPPC9-216ENST00000634178 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 LINC01549A6NIU2 74 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 H3BMG7 143 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 DNAL4O96015 105 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 S100A8P05109 93 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 SCGB1A1P11684 91 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 S100ZQ8WXG8 99 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 PRO1933Q9H354 126 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 HSPB8Q9UJY1 196 aa1.72□□□□□ -2.13
TRAPPC9-216ENST00000634178 LOC107984156A0A0G2JMH3 177 aa1.71□□□□□ -2.14
TRAPPC9-216ENST00000634178 TRBV10-3A0A0K0K1G6 114 aa1.71□□□□□ -2.14
TRAPPC9-216ENST00000634178 TRACP01848 142 aa1.71□□□□□ -2.14
TRAPPC9-216ENST00000634178 ARL17AQ8IVW1 177 aa1.71□□□□□ -2.14
TRAPPC9-216ENST00000634178 Q8N8P6 123 aa1.71□□□□□ -2.14
TRAPPC9-216ENST00000634178 V9GYV3 84 aa1.71□□□□□ -2.14
TRAPPC9-216ENST00000634178 A0A1B0GX51 115 aa1.7□□□□□ -2.14
TRAPPC9-216ENST00000634178 SMIM27A0A1W2PRY6 76 aa1.7□□□□□ -2.14
TRAPPC9-216ENST00000634178 SPINK8P0C7L1 97 aa1.7□□□□□ -2.14
TRAPPC9-216ENST00000634178 AKR1D1P51857 326 aa1.7□□□□□ -2.14
TRAPPC9-216ENST00000634178 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
TRAPPC9-216ENST00000634178 BATF3Q9NR55 127 aa1.7□□□□□ -2.14
TRAPPC9-216ENST00000634178 ARPC5O15511 151 aa1.69□□□□□ -2.14
TRAPPC9-216ENST00000634178 NXT2Q9NPJ8 142 aaKnown RBP1.69□□□□□ -2.14
TRAPPC9-216ENST00000634178 LINC00587B1AMM8 73 aa1.68□□□□□ -2.14
TRAPPC9-216ENST00000634178 NCR3O14931 201 aa1.68□□□□□ -2.14
TRAPPC9-216ENST00000634178 DPM2O94777 84 aa1.68□□□□□ -2.14
TRAPPC9-216ENST00000634178 IGLC3P0DOY3 106 aa1.68□□□□□ -2.14
TRAPPC9-216ENST00000634178 SPRR2DP22532 72 aa1.68□□□□□ -2.14
TRAPPC9-216ENST00000634178 LINC00158P58513 81 aa1.68□□□□□ -2.14
TRAPPC9-216ENST00000634178 SPRR2FQ96RM1 72 aa1.68□□□□□ -2.14
TRAPPC9-216ENST00000634178 KANTRA0A1W2PQU2 76 aa1.67□□□□□ -2.14
TRAPPC9-216ENST00000634178 MT1BP07438 61 aa1.67□□□□□ -2.14
TRAPPC9-216ENST00000634178 CLEC2BQ92478 149 aa1.67□□□□□ -2.14
TRAPPC9-216ENST00000634178 SMIM7Q9BQ49 75 aa1.67□□□□□ -2.14
TRAPPC9-216ENST00000634178 TRAV23DV6A0A075B6W5 121 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms