RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 LINC00472Q9H8W2 130 aa13.69□□□□□ -0.22
CAPNS1-216ENST00000628306 ASB16-AS1Q495Z4 193 aa13.66□□□□□ -0.22
CAPNS1-216ENST00000628306 J3KT08 172 aa13.65□□□□□ -0.22
CAPNS1-216ENST00000628306 HRCT1Q6UXD1 115 aa13.62□□□□□ -0.23
CAPNS1-216ENST00000628306 SPAG11AQ6PDA7 123 aa13.61□□□□□ -0.23
CAPNS1-216ENST00000628306 DSCR10P59022 87 aa13.59□□□□□ -0.23
CAPNS1-216ENST00000628306 HIST1H4AP62805 103 aaKnown RBP13.59□□□□□ -0.23
CAPNS1-216ENST00000628306 SPINK1P00995 79 aa13.58□□□□□ -0.23
CAPNS1-216ENST00000628306 RPS29P62273 56 aaKnown RBP13.58□□□□□ -0.23
CAPNS1-216ENST00000628306 C4orf48Q5BLP8 95 aa13.58□□□□□ -0.23
CAPNS1-216ENST00000628306 Q96NJ1 140 aa13.57□□□□□ -0.24
CAPNS1-216ENST00000628306 KRTAP4-1Q9BYQ7 146 aa13.56□□□□□ -0.24
CAPNS1-216ENST00000628306 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
CAPNS1-216ENST00000628306 IGKV4-1P06312 121 aa13.54□□□□□ -0.24
CAPNS1-216ENST00000628306 LIMD2Q9BT23 127 aa13.54□□□□□ -0.24
CAPNS1-216ENST00000628306 FSIP2Q5CZC0 6907 aa13.53□□□□□ -0.24
CAPNS1-216ENST00000628306 A8MWP4 228 aa13.51□□□□□ -0.25
CAPNS1-216ENST00000628306 A0A087WVE0 104 aa13.5□□□□□ -0.25
CAPNS1-216ENST00000628306 KRTAP13-3Q3SY46 172 aa13.5□□□□□ -0.25
CAPNS1-216ENST00000628306 FAM236AA0A1B0GUQ0 79 aa13.48□□□□□ -0.25
CAPNS1-216ENST00000628306 FAM236BA0A1B0GV22 79 aa13.48□□□□□ -0.25
CAPNS1-216ENST00000628306 DEFB116Q30KQ4 102 aa13.48□□□□□ -0.25
CAPNS1-216ENST00000628306 PRR15Q8IV56 129 aa13.47□□□□□ -0.25
CAPNS1-216ENST00000628306 NDUFB1O75438 58 aa13.46□□□□□ -0.25
CAPNS1-216ENST00000628306 FP248Q71RG6 208 aaPredicted RBP13.46□□□□□ -0.25
CAPNS1-216ENST00000628306 K7EQZ3 153 aa13.45□□□□□ -0.26
CAPNS1-216ENST00000628306 Q8N9L7 120 aa13.45□□□□□ -0.26
CAPNS1-216ENST00000628306 ATOX1O00244 68 aa13.41□□□□□ -0.26
CAPNS1-216ENST00000628306 C1orf195Q5TG92 126 aa13.41□□□□□ -0.26
CAPNS1-216ENST00000628306 CRCT1Q9UGL9 99 aa13.4□□□□□ -0.26
CAPNS1-216ENST00000628306 A0A1B0GVX0 72 aa13.35□□□□□ -0.27
CAPNS1-216ENST00000628306 SMIM20Q8N5G0 67 aa13.35□□□□□ -0.27
CAPNS1-216ENST00000628306 HCG22E2RYF7 251 aa13.34□□□□□ -0.27
CAPNS1-216ENST00000628306 PCP4P48539 62 aa13.33□□□□□ -0.27
CAPNS1-216ENST00000628306 LCE2CQ5TA81 110 aa13.33□□□□□ -0.27
CAPNS1-216ENST00000628306 ANAPC13Q9BS18 74 aa13.32□□□□□ -0.28
CAPNS1-216ENST00000628306 SEC61BP60468 96 aaKnown RBP13.28□□□□□ -0.28
CAPNS1-216ENST00000628306 C8orf87E5RJ46 101 aa13.27□□□□□ -0.29
CAPNS1-216ENST00000628306 MMP24-AS1A0A0U1RRL7 71 aa13.26□□□□□ -0.29
CAPNS1-216ENST00000628306 KRTAP19-2Q3LHN2 52 aa13.26□□□□□ -0.29
CAPNS1-216ENST00000628306 C8orf17Q9NRJ1 99 aa13.26□□□□□ -0.29
CAPNS1-216ENST00000628306 CASC2Q6XLA1 102 aa13.24□□□□□ -0.29
CAPNS1-216ENST00000628306 SERP2Q8N6R1 65 aa13.24□□□□□ -0.29
CAPNS1-216ENST00000628306 IGHV6-1A0A0B4J1U7 121 aa13.23□□□□□ -0.29
CAPNS1-216ENST00000628306 TRAV7A0A075B6U4 112 aa13.22□□□□□ -0.29
CAPNS1-216ENST00000628306 XP32Q5T750 250 aa13.21□□□□□ -0.29
CAPNS1-216ENST00000628306 hDV103S1A0JD37 113 aa13.2□□□□□ -0.3
CAPNS1-216ENST00000628306 OCR1Q9BZK8 76 aa13.19□□□□□ -0.3
CAPNS1-216ENST00000628306 WFDC13Q8IUB5 93 aa13.18□□□□□ -0.3
CAPNS1-216ENST00000628306 COX7CP15954 63 aa13.17□□□□□ -0.3
CAPNS1-216ENST00000628306 TMEM254Q8TBM7 123 aa13.17□□□□□ -0.3
CAPNS1-216ENST00000628306 LINC00313P59037 77 aa13.16□□□□□ -0.3
CAPNS1-216ENST00000628306 UQCRQO14949 82 aa13.14□□□□□ -0.31
CAPNS1-216ENST00000628306 MT1HP80294 61 aa13.13□□□□□ -0.31
CAPNS1-216ENST00000628306 NOTCH2NLQ7Z3S9 236 aa13.12□□□□□ -0.31
CAPNS1-216ENST00000628306 MRPL34Q9BQ48 92 aaKnown RBP13.12□□□□□ -0.31
CAPNS1-216ENST00000628306 TP53AIP1Q9HCN2 124 aa13.08□□□□□ -0.31
CAPNS1-216ENST00000628306 C5orf47Q569G3 176 aa13.04□□□□□ -0.32
CAPNS1-216ENST00000628306 Q8N9P0 234 aaPredicted RBP13.02□□□□□ -0.33
CAPNS1-216ENST00000628306 KRTAP16-1A8MUX0 517 aa13.01□□□□□ -0.33
CAPNS1-216ENST00000628306 LORP23490 312 aaPredicted RBP13.01□□□□□ -0.33
CAPNS1-216ENST00000628306 CCDC179H3BU77 68 aa12.98□□□□□ -0.33
CAPNS1-216ENST00000628306 FLGP20930 4061 aaPredicted RBP12.97□□□□□ -0.33
CAPNS1-216ENST00000628306 KRTAP10-6P60371 365 aaPredicted RBP12.95□□□□□ -0.34
CAPNS1-216ENST00000628306 PCOTHQ58A44 107 aa12.95□□□□□ -0.34
CAPNS1-216ENST00000628306 H3BPC8 53 aa12.93□□□□□ -0.34
CAPNS1-216ENST00000628306 KLKP1Q107X0 134 aa12.92□□□□□ -0.34
CAPNS1-216ENST00000628306 NDUFS5O43920 106 aa12.9□□□□□ -0.34
CAPNS1-216ENST00000628306 C20orf197Q8N268 126 aa12.9□□□□□ -0.34
CAPNS1-216ENST00000628306 MP68P56378 58 aa12.89□□□□□ -0.35
CAPNS1-216ENST00000628306 TRAV22A0A0B4J277 110 aa12.87□□□□□ -0.35
CAPNS1-216ENST00000628306 C9orf92A6NGG3 77 aa12.83□□□□□ -0.36
CAPNS1-216ENST00000628306 C20orf166-AS1Q96NR2 134 aa12.83□□□□□ -0.36
CAPNS1-216ENST00000628306 H0Y9P7 68 aa12.82□□□□□ -0.36
CAPNS1-216ENST00000628306 A8MUU9 505 aa12.81□□□□□ -0.36
CAPNS1-216ENST00000628306 NDUFC1O43677 76 aa12.81□□□□□ -0.36
CAPNS1-216ENST00000628306 ZCCHC13Q8WW36 166 aaKnown RBP12.81□□□□□ -0.36
CAPNS1-216ENST00000628306 Q5W150 140 aa12.75□□□□□ -0.37
CAPNS1-216ENST00000628306 SNURFQ9Y675 71 aa12.75□□□□□ -0.37
CAPNS1-216ENST00000628306 LINC00208Q96KT6 92 aa12.74□□□□□ -0.37
CAPNS1-216ENST00000628306 Q75L30 129 aa12.73□□□□□ -0.37
CAPNS1-216ENST00000628306 C1orf64Q8NEQ6 169 aa12.72□□□□□ -0.37
CAPNS1-216ENST00000628306 LOC101927531A0A1B0GV80 90 aa12.69□□□□□ -0.38
CAPNS1-216ENST00000628306 CYSTM1Q9H1C7 97 aa12.69□□□□□ -0.38
CAPNS1-216ENST00000628306 H7BZZ5 65 aa12.69□□□□□ -0.38
CAPNS1-216ENST00000628306 M0R2T5 61 aa12.65□□□□□ -0.38
CAPNS1-216ENST00000628306 RPL37P61927 97 aaKnown RBP12.63□□□□□ -0.39
CAPNS1-216ENST00000628306 TMEM258P61165 79 aa12.62□□□□□ -0.39
CAPNS1-216ENST00000628306 SSPOA2VEC9 5147 aa12.58□□□□□ -0.4
CAPNS1-216ENST00000628306 IGKV2-30P06310 120 aa12.57□□□□□ -0.4
CAPNS1-216ENST00000628306 CYP4F30PQ9H0H9 118 aa12.57□□□□□ -0.4
CAPNS1-216ENST00000628306 COX6B2Q6YFQ2 88 aa12.56□□□□□ -0.4
CAPNS1-216ENST00000628306 USH2AO75445 5202 aa12.55□□□□□ -0.4
CAPNS1-216ENST00000628306 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.54□□□□□ -0.4
CAPNS1-216ENST00000628306 KRTAP9-7A8MTY7 169 aa12.52□□□□□ -0.41
CAPNS1-216ENST00000628306 SPANXA2-OT1Q8N9U9 137 aa12.52□□□□□ -0.41
CAPNS1-216ENST00000628306 ATP5EP56381 51 aaPredicted RBP12.51□□□□□ -0.41
CAPNS1-216ENST00000628306 ATP11AUNQ6ZP68 121 aa12.51□□□□□ -0.41
CAPNS1-216ENST00000628306 C7orf65Q6ZTY9 151 aa12.44□□□□□ -0.42
CAPNS1-216ENST00000628306 FAM236DA0A1B0GTK5 79 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms