RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 KRTAP12-1P59990 96 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 RPL37P61927 97 aaKnown RBP1.15□□□□□ -2.23
SCN8A-210ENST00000627665 NEDD8Q15843 81 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 Q5XG85 94 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 Q86TA4 180 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 CDC42SE2Q9NRR3 84 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 JMJD7-PLA2G4BH0Y9G9 81 aa1.14□□□□□ -2.23
SCN8A-210ENST00000627665 ARL14EPLP0DKL9 152 aa1.14□□□□□ -2.23
SCN8A-210ENST00000627665 SPRR4Q96PI1 79 aa1.14□□□□□ -2.23
SCN8A-210ENST00000627665 ZFP30Q9Y2G7 519 aa1.14□□□□□ -2.23
SCN8A-210ENST00000627665 C7orf77A4D0Y5 90 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 A6NN06 94 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 I3L3M4 83 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 SPRR2EP22531 72 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 GCHFRP30047 84 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 SPRR2BP35325 72 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 SPRR2AP35326 72 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 KRTAP12-3P60328 96 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 UBE2G1P62253 170 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 SPATA45Q537H7 98 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 TOMM5Q8N4H5 51 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 RPL39LQ96EH5 51 aaKnown RBP1.13□□□□□ -2.23
SCN8A-210ENST00000627665 TMEM167BQ9NRX6 74 aa1.13□□□□□ -2.23
SCN8A-210ENST00000627665 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
SCN8A-210ENST00000627665 TRBV20-1A0A075B6N2 111 aa1.12□□□□□ -2.23
SCN8A-210ENST00000627665 NDUFB6O95139 128 aa1.12□□□□□ -2.23
SCN8A-210ENST00000627665 CLLU1Q5K131 121 aa1.12□□□□□ -2.23
SCN8A-210ENST00000627665 Q6ZUT4 128 aa1.12□□□□□ -2.23
SCN8A-210ENST00000627665 SSBP3-AS1Q7Z2R9 100 aa1.12□□□□□ -2.23
SCN8A-210ENST00000627665 TMEM242Q9NWH2 141 aa1.12□□□□□ -2.23
SCN8A-210ENST00000627665 TRAV23DV6A0A075B6W5 121 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 F2Z2F3 143 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 IGLC6P0CF74 106 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 ADCYAP1P18509 176 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 ATP11AUNQ6ZP68 121 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 PPDPFLQ8WWR9 84 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 COPS9Q8WXC6 57 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 LIMD2Q9BT23 127 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 PSMG3Q9BT73 122 aaPredicted RBP1.11□□□□□ -2.23
SCN8A-210ENST00000627665 TMEM191AQ9H0A3 160 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 Q9H521 79 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 TOMM7Q9P0U1 55 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 ERG28Q9UKR5 140 aa1.11□□□□□ -2.23
SCN8A-210ENST00000627665 FXYD6-FXYD2A0A087WZ82 144 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 SPRR2DP22532 72 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 FCER1GP30273 86 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 C9orf153Q5TBE3 101 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 BAGE2Q86Y30 109 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 SPRR2FQ96RM1 72 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 TCEAL7Q9BRU2 100 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 ST20Q9HBF5 79 aa1.1□□□□□ -2.23
SCN8A-210ENST00000627665 DSTQ03001 7570 aaKnown RBP1.1□□□□□ -2.23
SCN8A-210ENST00000627665 NAP1L6A6NFF2 107 aa1.09□□□□□ -2.23
SCN8A-210ENST00000627665 F8VRH5 84 aa1.09□□□□□ -2.23
SCN8A-210ENST00000627665 LINC01545Q5VT33 79 aa1.09□□□□□ -2.23
SCN8A-210ENST00000627665 Q8IZM0 81 aa1.09□□□□□ -2.23
SCN8A-210ENST00000627665 DMAC1Q96GE9 116 aa1.09□□□□□ -2.23
SCN8A-210ENST00000627665 OBSCN-AS1Q96MR7 158 aa1.09□□□□□ -2.23
SCN8A-210ENST00000627665 A0A087WXM4 84 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 CTXND1A0A1B0GTU2 59 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 CCDC179H3BU77 68 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 NCR3O14931 201 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 PDE6GP18545 87 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 POLR2KP53803 58 aaKnown RBP1.08□□□□□ -2.24
SCN8A-210ENST00000627665 C9orf62Q8N4C0 152 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 KCNRGQ8N5I3 272 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 CNFNQ9BYD5 112 aa1.08□□□□□ -2.24
SCN8A-210ENST00000627665 FAM236AA0A1B0GUQ0 79 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 FAM236BA0A1B0GV22 79 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 SIX6O95475 246 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 IL7P13232 177 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 IFI27P40305 119 aaPredicted RBP1.07□□□□□ -2.24
SCN8A-210ENST00000627665 RPL39P62891 51 aaKnown RBP1.07□□□□□ -2.24
SCN8A-210ENST00000627665 SERF2P84101 59 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 OCIAD2Q56VL3 154 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 PPP1R1CQ8WVI7 109 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 V9GYH0 126 aa1.07□□□□□ -2.24
SCN8A-210ENST00000627665 ETDCA0A1B0GVM5 59 aa1.06□□□□□ -2.24
SCN8A-210ENST00000627665 HIGD1CA8MV81 97 aa1.06□□□□□ -2.24
SCN8A-210ENST00000627665 PPP1R17O96001 155 aa1.06□□□□□ -2.24
SCN8A-210ENST00000627665 RPL7L1Q6DKI1 246 aaKnown RBP1.06□□□□□ -2.24
SCN8A-210ENST00000627665 LINC00575Q6W349 94 aa1.06□□□□□ -2.24
SCN8A-210ENST00000627665 KRTAP5-5Q701N2 237 aaPredicted RBP1.06□□□□□ -2.24
SCN8A-210ENST00000627665 C2orf88Q9BSF0 95 aa1.06□□□□□ -2.24
SCN8A-210ENST00000627665 MPC2O95563 127 aa1.05□□□□□ -2.24
SCN8A-210ENST00000627665 SPRR1AP35321 89 aa1.05□□□□□ -2.24
SCN8A-210ENST00000627665 KRTAP12-4P60329 112 aa1.05□□□□□ -2.24
SCN8A-210ENST00000627665 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
SCN8A-210ENST00000627665 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
SCN8A-210ENST00000627665 TMEM141Q96I45 108 aa1.05□□□□□ -2.24
SCN8A-210ENST00000627665 GNG4P50150 75 aa1.04□□□□□ -2.24
SCN8A-210ENST00000627665 SEC11AP67812 179 aa1.04□□□□□ -2.24
SCN8A-210ENST00000627665 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
SCN8A-210ENST00000627665 CSAG1Q6PB30 78 aa1.04□□□□□ -2.24
SCN8A-210ENST00000627665 Q6ZQY7 126 aa1.04□□□□□ -2.24
SCN8A-210ENST00000627665 COX7B2Q8TF08 81 aa1.04□□□□□ -2.24
SCN8A-210ENST00000627665 CDKN2A-AS1Q9UH64 79 aa1.04□□□□□ -2.24
SCN8A-210ENST00000627665 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
SCN8A-210ENST00000627665 TEX49A0A1B0GTD5 131 aa1.03□□□□□ -2.24
SCN8A-210ENST00000627665 SNCGO76070 127 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms