RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
NPLOC4-221ENST00000625705 COL5A1-AS1Q5SY13 56 aa4□□□□□ -1.77
NPLOC4-221ENST00000625705 SIGMAR1Q99720 223 aa4□□□□□ -1.77
NPLOC4-221ENST00000625705 HERC1Q15751 4861 aa4□□□□□ -1.77
NPLOC4-221ENST00000625705 TRBV7-4A0A0J9YYF1 115 aa3.99□□□□□ -1.77
NPLOC4-221ENST00000625705 JMJD7-PLA2G4BH0Y9G9 81 aa3.99□□□□□ -1.77
NPLOC4-221ENST00000625705 TAX1BP3O14907 124 aa3.99□□□□□ -1.77
NPLOC4-221ENST00000625705 A0A0U1RQV1 116 aa3.98□□□□□ -1.77
NPLOC4-221ENST00000625705 A0A1W2PNM2 257 aa3.98□□□□□ -1.77
NPLOC4-221ENST00000625705 SPCS1Q9Y6A9 102 aa3.98□□□□□ -1.77
NPLOC4-221ENST00000625705 MTURNQ8N3F0 131 aa3.97□□□□□ -1.77
NPLOC4-221ENST00000625705 H3BT86 120 aa3.96□□□□□ -1.78
NPLOC4-221ENST00000625705 IGKV4-1P06312 121 aa3.96□□□□□ -1.78
NPLOC4-221ENST00000625705 C14orf132Q9NPU4 83 aa3.96□□□□□ -1.78
NPLOC4-221ENST00000625705 PDE6GP18545 87 aa3.95□□□□□ -1.78
NPLOC4-221ENST00000625705 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
NPLOC4-221ENST00000625705 DEFB116Q30KQ4 102 aa3.94□□□□□ -1.78
NPLOC4-221ENST00000625705 LOC110117498A0A087WWA1 95 aa3.93□□□□□ -1.78
NPLOC4-221ENST00000625705 Q6ZQT0 140 aa3.93□□□□□ -1.78
NPLOC4-221ENST00000625705 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
NPLOC4-221ENST00000625705 Q96NJ1 140 aa3.93□□□□□ -1.78
NPLOC4-221ENST00000625705 PCOTHQ58A44 107 aa3.92□□□□□ -1.78
NPLOC4-221ENST00000625705 GTF2H5Q6ZYL4 71 aa3.92□□□□□ -1.78
NPLOC4-221ENST00000625705 IGHV6-1A0A0B4J1U7 121 aa3.91□□□□□ -1.78
NPLOC4-221ENST00000625705 J3KT08 172 aa3.91□□□□□ -1.78
NPLOC4-221ENST00000625705 K7EP34 96 aa3.91□□□□□ -1.78
NPLOC4-221ENST00000625705 DSCR10P59022 87 aa3.91□□□□□ -1.78
NPLOC4-221ENST00000625705 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
NPLOC4-221ENST00000625705 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.78
NPLOC4-221ENST00000625705 A0A1B0GW54 56 aa3.9□□□□□ -1.79
NPLOC4-221ENST00000625705 NDUFB1O75438 58 aa3.9□□□□□ -1.79
NPLOC4-221ENST00000625705 LINC00313P59037 77 aa3.9□□□□□ -1.79
NPLOC4-221ENST00000625705 ATP11AUNQ6ZP68 121 aa3.9□□□□□ -1.79
NPLOC4-221ENST00000625705 NREPQ16612 68 aa3.89□□□□□ -1.79
NPLOC4-221ENST00000625705 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
NPLOC4-221ENST00000625705 A0A1B0GVX0 72 aa3.87□□□□□ -1.79
NPLOC4-221ENST00000625705 C8orf87E5RJ46 101 aa3.87□□□□□ -1.79
NPLOC4-221ENST00000625705 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
NPLOC4-221ENST00000625705 Q75L30 129 aa3.87□□□□□ -1.79
NPLOC4-221ENST00000625705 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
NPLOC4-221ENST00000625705 LPAP08519 4548 aa3.86□□□□□ -1.79
NPLOC4-221ENST00000625705 A8MWP4 228 aa3.85□□□□□ -1.79
NPLOC4-221ENST00000625705 LRP2P98164 4655 aa3.85□□□□□ -1.79
NPLOC4-221ENST00000625705 F8W1H4 67 aa3.84□□□□□ -1.79
NPLOC4-221ENST00000625705 BPY2O14599 106 aa3.84□□□□□ -1.79
NPLOC4-221ENST00000625705 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.79
NPLOC4-221ENST00000625705 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.79
NPLOC4-221ENST00000625705 A8MUU9 505 aa3.83□□□□□ -1.8
NPLOC4-221ENST00000625705 COX6B2Q6YFQ2 88 aa3.83□□□□□ -1.8
NPLOC4-221ENST00000625705 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
NPLOC4-221ENST00000625705 UBL5Q9BZL1 73 aa3.83□□□□□ -1.8
NPLOC4-221ENST00000625705 PRO0461Q9UI25 63 aa3.83□□□□□ -1.8
NPLOC4-221ENST00000625705 IGKV2D-30A0A075B6S6 120 aa3.82□□□□□ -1.8
NPLOC4-221ENST00000625705 ETDBQ3ZM63 59 aa3.82□□□□□ -1.8
NPLOC4-221ENST00000625705 Q6ZVQ6 151 aa3.82□□□□□ -1.8
NPLOC4-221ENST00000625705 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
NPLOC4-221ENST00000625705 C8orf17Q9NRJ1 99 aa3.82□□□□□ -1.8
NPLOC4-221ENST00000625705 IGKV3D-7A0A0C4DH55 119 aa3.81□□□□□ -1.8
NPLOC4-221ENST00000625705 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
NPLOC4-221ENST00000625705 NDUFS5O43920 106 aa3.8□□□□□ -1.8
NPLOC4-221ENST00000625705 PRR15Q8IV56 129 aa3.8□□□□□ -1.8
NPLOC4-221ENST00000625705 A0A1B0GV90 55 aa3.79□□□□□ -1.8
NPLOC4-221ENST00000625705 K7EQZ3 153 aa3.79□□□□□ -1.8
NPLOC4-221ENST00000625705 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
NPLOC4-221ENST00000625705 LINC00846Q9NV44 126 aa3.79□□□□□ -1.8
NPLOC4-221ENST00000625705 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
NPLOC4-221ENST00000625705 MPLKIPQ8TAP9 179 aa3.78□□□□□ -1.8
NPLOC4-221ENST00000625705 hDV103S1A0JD37 113 aa3.77□□□□□ -1.81
NPLOC4-221ENST00000625705 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
NPLOC4-221ENST00000625705 Q8N9L7 120 aa3.77□□□□□ -1.81
NPLOC4-221ENST00000625705 TMEM254Q8TBM7 123 aa3.77□□□□□ -1.81
NPLOC4-221ENST00000625705 MRPL34Q9BQ48 92 aaKnown RBP3.77□□□□□ -1.81
NPLOC4-221ENST00000625705 MMP24-AS1A0A0U1RRL7 71 aa3.76□□□□□ -1.81
NPLOC4-221ENST00000625705 FAM236DA0A1B0GTK5 79 aa3.76□□□□□ -1.81
NPLOC4-221ENST00000625705 FAM236CP0DP71 79 aa3.76□□□□□ -1.81
NPLOC4-221ENST00000625705 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
NPLOC4-221ENST00000625705 CASC2Q6XLA1 102 aa3.76□□□□□ -1.81
NPLOC4-221ENST00000625705 ZCCHC13Q8WW36 166 aaKnown RBP3.76□□□□□ -1.81
NPLOC4-221ENST00000625705 M0R2T5 61 aa3.74□□□□□ -1.81
NPLOC4-221ENST00000625705 RBM12B-AS1Q9P1G2 102 aa3.74□□□□□ -1.81
NPLOC4-221ENST00000625705 ACYP1P07311 99 aa3.73□□□□□ -1.81
NPLOC4-221ENST00000625705 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
NPLOC4-221ENST00000625705 SPINK7P58062 85 aa3.71□□□□□ -1.82
NPLOC4-221ENST00000625705 CXCL6P80162 114 aa3.71□□□□□ -1.82
NPLOC4-221ENST00000625705 FAM240AA0A1B0GVK7 77 aa3.7□□□□□ -1.82
NPLOC4-221ENST00000625705 J3QR89 54 aa3.69□□□□□ -1.82
NPLOC4-221ENST00000625705 HIST1H4AP62805 103 aaKnown RBP3.69□□□□□ -1.82
NPLOC4-221ENST00000625705 MT1HP80294 61 aa3.69□□□□□ -1.82
NPLOC4-221ENST00000625705 KRTAP19-2Q3LHN2 52 aa3.69□□□□□ -1.82
NPLOC4-221ENST00000625705 ATP5EP2Q5VTU8 51 aa3.69□□□□□ -1.82
NPLOC4-221ENST00000625705 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
NPLOC4-221ENST00000625705 PCP4P48539 62 aa3.68□□□□□ -1.82
NPLOC4-221ENST00000625705 C7orf65Q6ZTY9 151 aa3.67□□□□□ -1.82
NPLOC4-221ENST00000625705 HRES1P13985 223 aa3.66□□□□□ -1.82
NPLOC4-221ENST00000625705 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
NPLOC4-221ENST00000625705 LINC00643Q86TS7 51 aa3.65□□□□□ -1.83
NPLOC4-221ENST00000625705 K7ERU9 68 aa3.64□□□□□ -1.83
NPLOC4-221ENST00000625705 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
NPLOC4-221ENST00000625705 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
NPLOC4-221ENST00000625705 Q5W150 140 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms