RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 C21orf62-AS1Q17RA5 79 aa6.34□□□□□ -1.39
COL8A1-208ENST00000621757 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
COL8A1-208ENST00000621757 PDE6GP18545 87 aa6.33□□□□□ -1.4
COL8A1-208ENST00000621757 LINC00313P59037 77 aa6.33□□□□□ -1.4
COL8A1-208ENST00000621757 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
COL8A1-208ENST00000621757 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
COL8A1-208ENST00000621757 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
COL8A1-208ENST00000621757 COL5A1-AS1Q5SY13 56 aa6.32□□□□□ -1.4
COL8A1-208ENST00000621757 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
COL8A1-208ENST00000621757 SPCS1Q9Y6A9 102 aa6.32□□□□□ -1.4
COL8A1-208ENST00000621757 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
COL8A1-208ENST00000621757 A0A1B0GW54 56 aa6.3□□□□□ -1.4
COL8A1-208ENST00000621757 PCP4P48539 62 aa6.3□□□□□ -1.4
COL8A1-208ENST00000621757 J3KT08 172 aa6.29□□□□□ -1.4
COL8A1-208ENST00000621757 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
COL8A1-208ENST00000621757 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
COL8A1-208ENST00000621757 MT1HP80294 61 aa6.25□□□□□ -1.41
COL8A1-208ENST00000621757 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
COL8A1-208ENST00000621757 K7EP34 96 aa6.24□□□□□ -1.41
COL8A1-208ENST00000621757 A8MWP4 228 aa6.23□□□□□ -1.41
COL8A1-208ENST00000621757 NDUFB1O75438 58 aa6.23□□□□□ -1.41
COL8A1-208ENST00000621757 NREPQ16612 68 aa6.23□□□□□ -1.41
COL8A1-208ENST00000621757 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
COL8A1-208ENST00000621757 IGKV3D-7A0A0C4DH55 119 aa6.22□□□□□ -1.41
COL8A1-208ENST00000621757 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
COL8A1-208ENST00000621757 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
COL8A1-208ENST00000621757 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
COL8A1-208ENST00000621757 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
COL8A1-208ENST00000621757 C8orf17Q9NRJ1 99 aa6.2□□□□□ -1.42
COL8A1-208ENST00000621757 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
COL8A1-208ENST00000621757 PRR15Q8IV56 129 aa6.18□□□□□ -1.42
COL8A1-208ENST00000621757 K7EQZ3 153 aa6.16□□□□□ -1.42
COL8A1-208ENST00000621757 GTF2H5Q6ZYL4 71 aa6.16□□□□□ -1.42
COL8A1-208ENST00000621757 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
COL8A1-208ENST00000621757 MMP24-AS1A0A0U1RRL7 71 aa6.15□□□□□ -1.42
COL8A1-208ENST00000621757 Q6ZVQ6 151 aa6.15□□□□□ -1.42
COL8A1-208ENST00000621757 ZCCHC13Q8WW36 166 aaKnown RBP6.15□□□□□ -1.42
COL8A1-208ENST00000621757 BPY2O14599 106 aa6.14□□□□□ -1.43
COL8A1-208ENST00000621757 M0R2T5 61 aa6.13□□□□□ -1.43
COL8A1-208ENST00000621757 HRES1P13985 223 aa6.11□□□□□ -1.43
COL8A1-208ENST00000621757 TMEM254Q8TBM7 123 aa6.11□□□□□ -1.43
COL8A1-208ENST00000621757 F8W1H4 67 aa6.1□□□□□ -1.43
COL8A1-208ENST00000621757 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
COL8A1-208ENST00000621757 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
COL8A1-208ENST00000621757 LINC00846Q9NV44 126 aa6.1□□□□□ -1.43
COL8A1-208ENST00000621757 hDV103S1A0JD37 113 aa6.09□□□□□ -1.43
COL8A1-208ENST00000621757 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
COL8A1-208ENST00000621757 Q8N9L7 120 aa6.09□□□□□ -1.43
COL8A1-208ENST00000621757 ETDBQ3ZM63 59 aa6.08□□□□□ -1.44
COL8A1-208ENST00000621757 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
COL8A1-208ENST00000621757 FAM236DA0A1B0GTK5 79 aa6.07□□□□□ -1.44
COL8A1-208ENST00000621757 FAM236CP0DP71 79 aa6.07□□□□□ -1.44
COL8A1-208ENST00000621757 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
COL8A1-208ENST00000621757 K7ERU9 68 aa6.06□□□□□ -1.44
COL8A1-208ENST00000621757 SPINK7P58062 85 aa6.06□□□□□ -1.44
COL8A1-208ENST00000621757 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
COL8A1-208ENST00000621757 NDUFS5O43920 106 aa6.05□□□□□ -1.44
COL8A1-208ENST00000621757 WFDC13Q8IUB5 93 aa6.05□□□□□ -1.44
COL8A1-208ENST00000621757 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
COL8A1-208ENST00000621757 CASC2Q6XLA1 102 aa6.03□□□□□ -1.44
COL8A1-208ENST00000621757 SCGB1A1P11684 91 aa6□□□□□ -1.45
COL8A1-208ENST00000621757 HCG22E2RYF7 251 aa5.98□□□□□ -1.45
COL8A1-208ENST00000621757 Q5W150 140 aa5.97□□□□□ -1.45
COL8A1-208ENST00000621757 CXCL6P80162 114 aa5.96□□□□□ -1.46
COL8A1-208ENST00000621757 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
COL8A1-208ENST00000621757 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
COL8A1-208ENST00000621757 FAM240AA0A1B0GVK7 77 aa5.92□□□□□ -1.46
COL8A1-208ENST00000621757 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
COL8A1-208ENST00000621757 ACYP1P07311 99 aa5.91□□□□□ -1.46
COL8A1-208ENST00000621757 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
COL8A1-208ENST00000621757 J3QR89 54 aa5.89□□□□□ -1.47
COL8A1-208ENST00000621757 ATP5EP2Q5VTU8 51 aa5.87□□□□□ -1.47
COL8A1-208ENST00000621757 MT2AP02795 61 aa5.86□□□□□ -1.47
COL8A1-208ENST00000621757 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
COL8A1-208ENST00000621757 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
COL8A1-208ENST00000621757 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
COL8A1-208ENST00000621757 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
COL8A1-208ENST00000621757 MT1FP04733 61 aa5.82□□□□□ -1.48
COL8A1-208ENST00000621757 HIST1H4AP62805 103 aaKnown RBP5.81□□□□□ -1.48
COL8A1-208ENST00000621757 C4orf26Q17RF5 130 aa5.81□□□□□ -1.48
COL8A1-208ENST00000621757 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
COL8A1-208ENST00000621757 USH2AO75445 5202 aa5.78□□□□□ -1.48
COL8A1-208ENST00000621757 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
COL8A1-208ENST00000621757 A0A087WVE0 104 aa5.76□□□□□ -1.49
COL8A1-208ENST00000621757 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
COL8A1-208ENST00000621757 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
COL8A1-208ENST00000621757 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
COL8A1-208ENST00000621757 C1orf64Q8NEQ6 169 aa5.72□□□□□ -1.49
COL8A1-208ENST00000621757 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
COL8A1-208ENST00000621757 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
COL8A1-208ENST00000621757 CYP4F30PQ9H0H9 118 aa5.71□□□□□ -1.5
COL8A1-208ENST00000621757 UQCRQO14949 82 aa5.7□□□□□ -1.5
COL8A1-208ENST00000621757 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
COL8A1-208ENST00000621757 H0Y9P7 68 aa5.68□□□□□ -1.5
COL8A1-208ENST00000621757 LCE2BO14633 110 aa5.68□□□□□ -1.5
COL8A1-208ENST00000621757 S4R3F8 94 aa5.68□□□□□ -1.5
COL8A1-208ENST00000621757 ATOX1O00244 68 aa5.66□□□□□ -1.5
COL8A1-208ENST00000621757 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
COL8A1-208ENST00000621757 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
COL8A1-208ENST00000621757 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms