RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
VPS11-208ENST00000621676 HCG22E2RYF7 251 aa6.11□□□□□ -1.43
VPS11-208ENST00000621676 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
VPS11-208ENST00000621676 H7BZZ5 65 aa6.11□□□□□ -1.43
VPS11-208ENST00000621676 PCOTHQ58A44 107 aa6.1□□□□□ -1.43
VPS11-208ENST00000621676 LINC00472Q9H8W2 130 aa6.1□□□□□ -1.43
VPS11-208ENST00000621676 TRAV7A0A075B6U4 112 aa6.1□□□□□ -1.43
VPS11-208ENST00000621676 PRR15Q8IV56 129 aa6.1□□□□□ -1.43
VPS11-208ENST00000621676 LINC00208Q96KT6 92 aa6.09□□□□□ -1.43
VPS11-208ENST00000621676 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
VPS11-208ENST00000621676 LINC00483Q53H64 154 aa6.08□□□□□ -1.44
VPS11-208ENST00000621676 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
VPS11-208ENST00000621676 IGLV8-61A0A075B6I0 122 aa6.07□□□□□ -1.44
VPS11-208ENST00000621676 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
VPS11-208ENST00000621676 KLKP1Q107X0 134 aa6.06□□□□□ -1.44
VPS11-208ENST00000621676 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
VPS11-208ENST00000621676 A8MWP4 228 aa6.06□□□□□ -1.44
VPS11-208ENST00000621676 Q96NJ1 140 aa6.05□□□□□ -1.44
VPS11-208ENST00000621676 HSPG2P98160 4391 aa6.05□□□□□ -1.44
VPS11-208ENST00000621676 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
VPS11-208ENST00000621676 TMEM254Q8TBM7 123 aa6.03□□□□□ -1.44
VPS11-208ENST00000621676 SSBP3-AS1Q7Z2R9 100 aa6.02□□□□□ -1.45
VPS11-208ENST00000621676 Q8N1X5 172 aa6.02□□□□□ -1.45
VPS11-208ENST00000621676 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
VPS11-208ENST00000621676 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
VPS11-208ENST00000621676 A0A1B0GVX0 72 aa6□□□□□ -1.45
VPS11-208ENST00000621676 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
VPS11-208ENST00000621676 IGKV2D-30A0A075B6S6 120 aa5.99□□□□□ -1.45
VPS11-208ENST00000621676 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
VPS11-208ENST00000621676 H0Y9P7 68 aa5.99□□□□□ -1.45
VPS11-208ENST00000621676 IGKV2-30P06310 120 aa5.99□□□□□ -1.45
VPS11-208ENST00000621676 LINC00313P59037 77 aa5.99□□□□□ -1.45
VPS11-208ENST00000621676 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
VPS11-208ENST00000621676 ABCA13Q86UQ4 5058 aa5.97□□□□□ -1.45
VPS11-208ENST00000621676 Q5W150 140 aa5.97□□□□□ -1.45
VPS11-208ENST00000621676 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
VPS11-208ENST00000621676 NDUFC1O43677 76 aa5.96□□□□□ -1.45
VPS11-208ENST00000621676 KRTAP10-4P60372 401 aaPredicted RBP5.95□□□□□ -1.46
VPS11-208ENST00000621676 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
VPS11-208ENST00000621676 MP68P56378 58 aa5.95□□□□□ -1.46
VPS11-208ENST00000621676 FAM229BQ4G0N7 80 aa5.94□□□□□ -1.46
VPS11-208ENST00000621676 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
VPS11-208ENST00000621676 MPLKIPQ8TAP9 179 aa5.93□□□□□ -1.46
VPS11-208ENST00000621676 A0A0U1RQV1 116 aa5.91□□□□□ -1.46
VPS11-208ENST00000621676 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
VPS11-208ENST00000621676 SPINK1P00995 79 aa5.91□□□□□ -1.46
VPS11-208ENST00000621676 ATP5EP56381 51 aaPredicted RBP5.91□□□□□ -1.46
VPS11-208ENST00000621676 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
VPS11-208ENST00000621676 HERC2O95714 4834 aa5.91□□□□□ -1.46
VPS11-208ENST00000621676 LPAP08519 4548 aa5.91□□□□□ -1.46
VPS11-208ENST00000621676 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
VPS11-208ENST00000621676 LIMD2Q9BT23 127 aa5.91□□□□□ -1.46
VPS11-208ENST00000621676 LRP2P98164 4655 aa5.9□□□□□ -1.47
VPS11-208ENST00000621676 MUC2Q02817 5179 aa5.9□□□□□ -1.47
VPS11-208ENST00000621676 TRAV22A0A0B4J277 110 aa5.89□□□□□ -1.47
VPS11-208ENST00000621676 A0A1B0GW54 56 aa5.89□□□□□ -1.47
VPS11-208ENST00000621676 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
VPS11-208ENST00000621676 J3QL48 77 aa5.86□□□□□ -1.47
VPS11-208ENST00000621676 HERC1Q15751 4861 aa5.85□□□□□ -1.47
VPS11-208ENST00000621676 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
VPS11-208ENST00000621676 CD164Q04900 197 aa5.82□□□□□ -1.48
VPS11-208ENST00000621676 H3BS24 57 aa5.81□□□□□ -1.48
VPS11-208ENST00000621676 V9GYY9 64 aa5.81□□□□□ -1.48
VPS11-208ENST00000621676 PCLOQ9Y6V0 5065 aa5.81□□□□□ -1.48
VPS11-208ENST00000621676 KRTAP16-1A8MUX0 517 aa5.77□□□□□ -1.48
VPS11-208ENST00000621676 SPAG11AQ6PDA7 123 aa5.77□□□□□ -1.48
VPS11-208ENST00000621676 ZCCHC13Q8WW36 166 aaKnown RBP5.77□□□□□ -1.49
VPS11-208ENST00000621676 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
VPS11-208ENST00000621676 PSPHP1O15172 72 aa5.74□□□□□ -1.49
VPS11-208ENST00000621676 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
VPS11-208ENST00000621676 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
VPS11-208ENST00000621676 Q1T7F1 81 aa5.74□□□□□ -1.49
VPS11-208ENST00000621676 HRES1P13985 223 aa5.73□□□□□ -1.49
VPS11-208ENST00000621676 TNXBP22105 4242 aa5.72□□□□□ -1.49
VPS11-208ENST00000621676 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
VPS11-208ENST00000621676 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
VPS11-208ENST00000621676 CYP4F30PQ9H0H9 118 aa5.71□□□□□ -1.49
VPS11-208ENST00000621676 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
VPS11-208ENST00000621676 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
VPS11-208ENST00000621676 SPINK7P58062 85 aa5.68□□□□□ -1.5
VPS11-208ENST00000621676 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
VPS11-208ENST00000621676 A8MUN3 132 aa5.68□□□□□ -1.5
VPS11-208ENST00000621676 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
VPS11-208ENST00000621676 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
VPS11-208ENST00000621676 BIRC6Q9NR09 4857 aa5.66□□□□□ -1.5
VPS11-208ENST00000621676 A8MU10 97 aa5.66□□□□□ -1.5
VPS11-208ENST00000621676 COA5Q86WW8 74 aa5.65□□□□□ -1.51
VPS11-208ENST00000621676 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
VPS11-208ENST00000621676 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
VPS11-208ENST00000621676 LOC101927531A0A1B0GV80 90 aa5.62□□□□□ -1.51
VPS11-208ENST00000621676 XP32Q5T750 250 aa5.62□□□□□ -1.51
VPS11-208ENST00000621676 Q5VV11 94 aa5.62□□□□□ -1.51
VPS11-208ENST00000621676 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
VPS11-208ENST00000621676 KRTAP13-3Q3SY46 172 aa5.58□□□□□ -1.52
VPS11-208ENST00000621676 SPANXA2-OT1Q8N9U9 137 aa5.58□□□□□ -1.52
VPS11-208ENST00000621676 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
VPS11-208ENST00000621676 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
VPS11-208ENST00000621676 H3BPC8 53 aa5.56□□□□□ -1.52
VPS11-208ENST00000621676 A8MUU9 505 aa5.53□□□□□ -1.52
VPS11-208ENST00000621676 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms