RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
SRSF3-207ENST00000620389 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
SRSF3-207ENST00000620389 KRTAP10-9P60411 292 aa4.96□□□□□ -1.62
SRSF3-207ENST00000620389 DEFB113Q30KQ7 82 aa4.96□□□□□ -1.62
SRSF3-207ENST00000620389 TEP1Q99973 2627 aaKnown RBP4.95□□□□□ -1.62
SRSF3-207ENST00000620389 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
SRSF3-207ENST00000620389 LY6G6CO95867 125 aa4.95□□□□□ -1.62
SRSF3-207ENST00000620389 ACANP16112 2415 aa4.94□□□□□ -1.62
SRSF3-207ENST00000620389 SPINK6Q6UWN8 80 aa4.94□□□□□ -1.62
SRSF3-207ENST00000620389 FAM229AH3BQW9 127 aa4.94□□□□□ -1.62
SRSF3-207ENST00000620389 Q6ZSA8 131 aa4.94□□□□□ -1.62
SRSF3-207ENST00000620389 KRTAP13-1Q8IUC0 172 aa4.94□□□□□ -1.62
SRSF3-207ENST00000620389 DNAH1Q9P2D7 4330 aa4.93□□□□□ -1.62
SRSF3-207ENST00000620389 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
SRSF3-207ENST00000620389 KRTAP1-3Q8IUG1 177 aa4.92□□□□□ -1.62
SRSF3-207ENST00000620389 SSBP3-AS1Q7Z2R9 100 aa4.92□□□□□ -1.62
SRSF3-207ENST00000620389 NBEAL1Q6ZS30 2694 aa4.92□□□□□ -1.62
SRSF3-207ENST00000620389 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
SRSF3-207ENST00000620389 TENM3Q9P273 2699 aa4.91□□□□□ -1.62
SRSF3-207ENST00000620389 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
SRSF3-207ENST00000620389 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
SRSF3-207ENST00000620389 SPINK1P00995 79 aa4.9□□□□□ -1.63
SRSF3-207ENST00000620389 NOTCH2Q04721 2471 aa4.9□□□□□ -1.63
SRSF3-207ENST00000620389 PANO1I0J062 215 aa4.9□□□□□ -1.63
SRSF3-207ENST00000620389 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
SRSF3-207ENST00000620389 WWC2-AS2Q96NR7 200 aa4.9□□□□□ -1.63
SRSF3-207ENST00000620389 TENM4Q6N022 2769 aa4.89□□□□□ -1.63
SRSF3-207ENST00000620389 A0A087WTM6 91 aa4.88□□□□□ -1.63
SRSF3-207ENST00000620389 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
SRSF3-207ENST00000620389 FASNP49327 2511 aaKnown RBP4.87□□□□□ -1.63
SRSF3-207ENST00000620389 NUPR2A6NF83 97 aa4.87□□□□□ -1.63
SRSF3-207ENST00000620389 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
SRSF3-207ENST00000620389 TENM1Q9UKZ4 2725 aa4.87□□□□□ -1.63
SRSF3-207ENST00000620389 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
SRSF3-207ENST00000620389 DNAH10Q8IVF4 4471 aa4.85□□□□□ -1.63
SRSF3-207ENST00000620389 C14orf177Q52M58 125 aa4.85□□□□□ -1.63
SRSF3-207ENST00000620389 ANAPC11Q9NYG5 84 aa4.85□□□□□ -1.63
SRSF3-207ENST00000620389 A0A1B0GU33 70 aa4.84□□□□□ -1.63
SRSF3-207ENST00000620389 LYSTQ99698 3801 aa4.84□□□□□ -1.63
SRSF3-207ENST00000620389 KRTAP1-1Q07627 177 aa4.83□□□□□ -1.64
SRSF3-207ENST00000620389 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
SRSF3-207ENST00000620389 K7ERS5 55 aa4.82□□□□□ -1.64
SRSF3-207ENST00000620389 TYMSOSQ8TAI1 123 aa4.82□□□□□ -1.64
SRSF3-207ENST00000620389 NOTCH1P46531 2555 aa4.81□□□□□ -1.64
SRSF3-207ENST00000620389 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
SRSF3-207ENST00000620389 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
SRSF3-207ENST00000620389 ATRQ13535 2644 aa4.79□□□□□ -1.64
SRSF3-207ENST00000620389 ANK2Q01484 3957 aa4.79□□□□□ -1.64
SRSF3-207ENST00000620389 Q8N1X5 172 aa4.79□□□□□ -1.64
SRSF3-207ENST00000620389 FLNBO75369 2602 aaKnown RBP4.79□□□□□ -1.64
SRSF3-207ENST00000620389 CIRBP-AS1Q8TBR5 109 aa4.78□□□□□ -1.64
SRSF3-207ENST00000620389 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
SRSF3-207ENST00000620389 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
SRSF3-207ENST00000620389 FRAS1Q86XX4 4008 aa4.75□□□□□ -1.65
SRSF3-207ENST00000620389 TGP01266 2768 aa4.74□□□□□ -1.65
SRSF3-207ENST00000620389 COL6A5A8TX70 2615 aa4.73□□□□□ -1.65
SRSF3-207ENST00000620389 MAST4O15021 2626 aa4.73□□□□□ -1.65
SRSF3-207ENST00000620389 KRTAP10-11P60412 298 aa4.72□□□□□ -1.65
SRSF3-207ENST00000620389 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.72□□□□□ -1.65
SRSF3-207ENST00000620389 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
SRSF3-207ENST00000620389 SPACA4Q8TDM5 124 aa4.7□□□□□ -1.66
SRSF3-207ENST00000620389 DNAH8Q96JB1 4490 aa4.7□□□□□ -1.66
SRSF3-207ENST00000620389 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
SRSF3-207ENST00000620389 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
SRSF3-207ENST00000620389 NSD1Q96L73 2696 aaPredicted RBP4.69□□□□□ -1.66
SRSF3-207ENST00000620389 COX6B2Q6YFQ2 88 aa4.69□□□□□ -1.66
SRSF3-207ENST00000620389 SMR3AQ99954 134 aa4.68□□□□□ -1.66
SRSF3-207ENST00000620389 NBDYA0A0U1RRE5 68 aa4.68□□□□□ -1.66
SRSF3-207ENST00000620389 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.66
SRSF3-207ENST00000620389 STAB2Q8WWQ8 2551 aa4.65□□□□□ -1.67
SRSF3-207ENST00000620389 DNAH17Q9UFH2 4485 aa4.64□□□□□ -1.67
SRSF3-207ENST00000620389 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
SRSF3-207ENST00000620389 UBE2DNLQ8IWF7 75 aa4.61□□□□□ -1.67
SRSF3-207ENST00000620389 CMYA5Q8N3K9 4069 aa4.61□□□□□ -1.67
SRSF3-207ENST00000620389 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
SRSF3-207ENST00000620389 KRTAP24-1Q3LI83 254 aa4.58□□□□□ -1.68
SRSF3-207ENST00000620389 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
SRSF3-207ENST00000620389 A0A0D9SG42 100 aa4.56□□□□□ -1.68
SRSF3-207ENST00000620389 DNAH7Q8WXX0 4024 aa4.53□□□□□ -1.68
SRSF3-207ENST00000620389 STAB1Q9NY15 2570 aa4.53□□□□□ -1.68
SRSF3-207ENST00000620389 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
SRSF3-207ENST00000620389 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
SRSF3-207ENST00000620389 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
SRSF3-207ENST00000620389 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
SRSF3-207ENST00000620389 KMT2AQ03164 3969 aa4.51□□□□□ -1.69
SRSF3-207ENST00000620389 DNAH3Q8TD57 4116 aa4.5□□□□□ -1.69
SRSF3-207ENST00000620389 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
SRSF3-207ENST00000620389 VPS13DQ5THJ4 4388 aa4.5□□□□□ -1.69
SRSF3-207ENST00000620389 FBN3Q75N90 2809 aa4.49□□□□□ -1.69
SRSF3-207ENST00000620389 MGAM2Q2M2H8 2515 aa4.49□□□□□ -1.69
SRSF3-207ENST00000620389 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
SRSF3-207ENST00000620389 S4R3F8 94 aa4.47□□□□□ -1.69
SRSF3-207ENST00000620389 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
SRSF3-207ENST00000620389 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
SRSF3-207ENST00000620389 XP32Q5T750 250 aa4.44□□□□□ -1.7
SRSF3-207ENST00000620389 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.7
SRSF3-207ENST00000620389 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
SRSF3-207ENST00000620389 PLECQ15149 4684 aaKnown RBP4.39□□□□□ -1.71
SRSF3-207ENST00000620389 KRTAP1-4P0C5Y4 121 aa4.38□□□□□ -1.71
SRSF3-207ENST00000620389 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms