RNA–Protein interactions for RNA: ENST00000620323.1

USP12-203, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 3 BASIC

Gene USP12, Length 349 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-203ENST00000620323 FANCD2Q9BXW9 1451 aa0.09□□□□□ -2.4
USP12-203ENST00000620323 TNRC18O15417 2968 aaPredicted RBP0.09□□□□□ -2.4
USP12-203ENST00000620323 EPG5Q9HCE0 2579 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 SONP18583 2426 aaKnown RBP0.08□□□□□ -2.4
USP12-203ENST00000620323 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 FASNP49327 2511 aaKnown RBP0.08□□□□□ -2.4
USP12-203ENST00000620323 ANKHD1Q8IWZ3 2542 aaKnown RBP0.08□□□□□ -2.4
USP12-203ENST00000620323 HMCN2Q8NDA2 5059 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 C9orf92A6NGG3 77 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 WFDC10BQ8IUB3 73 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 NOP10Q9NPE3 64 aaKnown RBP0.08□□□□□ -2.4
USP12-203ENST00000620323 CMC2Q9NRP2 79 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 STAB1Q9NY15 2570 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 A0A1B0GUL6 1792 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 ADCY10Q96PN6 1610 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 ACACAQ13085 2346 aa0.08□□□□□ -2.4
USP12-203ENST00000620323 PRRC2CQ9Y520 2896 aaKnown RBP0.08□□□□□ -2.4
USP12-203ENST00000620323 LRP2P98164 4655 aa0.07□□□□□ -2.4
USP12-203ENST00000620323 IGLV5-48A0A075B6I7 105 aa0.07□□□□□ -2.4
USP12-203ENST00000620323 SNRPGP15A8MWD9 76 aa0.07□□□□□ -2.4
USP12-203ENST00000620323 TFF3Q07654 80 aa0.07□□□□□ -2.4
USP12-203ENST00000620323 DEFB110Q30KQ9 67 aa0.07□□□□□ -2.4
USP12-203ENST00000620323 KRTAP6-2Q3LI66 62 aa0.07□□□□□ -2.4
USP12-203ENST00000620323 STAB2Q8WWQ8 2551 aa0.07□□□□□ -2.4
USP12-203ENST00000620323 PKD1P98161 4303 aa0.06□□□□□ -2.4
USP12-203ENST00000620323 ABCC8Q09428 1581 aa0.06□□□□□ -2.4
USP12-203ENST00000620323 FAM186AA6NE01 2351 aa0.06□□□□□ -2.4
USP12-203ENST00000620323 GCN1Q92616 2671 aaKnown RBP0.06□□□□□ -2.4
USP12-203ENST00000620323 RIF1Q5UIP0 2472 aaKnown RBP0.06□□□□□ -2.4
USP12-203ENST00000620323 CCDC168Q8NDH2 2452 aa0.06□□□□□ -2.4
USP12-203ENST00000620323 LYSTQ99698 3801 aa0.06□□□□□ -2.4
USP12-203ENST00000620323 LMO7Q8WWI1 1683 aa0.05□□□□□ -2.4
USP12-203ENST00000620323 COL6A3P12111 3177 aa0.05□□□□□ -2.4
USP12-203ENST00000620323 TENM2Q9NT68 2774 aa0.05□□□□□ -2.4
USP12-203ENST00000620323 SPRR2AP35326 72 aa0.05□□□□□ -2.4
USP12-203ENST00000620323 NF1P21359 2839 aa0.05□□□□□ -2.4
USP12-203ENST00000620323 ABCA5Q8WWZ7 1642 aa0.05□□□□□ -2.4
USP12-203ENST00000620323 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
USP12-203ENST00000620323 NBEAL1Q6ZS30 2694 aa0.04□□□□□ -2.4
USP12-203ENST00000620323 ANK3Q12955 4377 aaKnown RBP0.04□□□□□ -2.4
USP12-203ENST00000620323 FLGP20930 4061 aaPredicted RBP0.04□□□□□ -2.4
USP12-203ENST00000620323 MMP24-AS1A0A0U1RRL7 71 aa0.04□□□□□ -2.4
USP12-203ENST00000620323 M0QY20 66 aa0.04□□□□□ -2.4
USP12-203ENST00000620323 NRXN3Q9Y4C0 1643 aa0.04□□□□□ -2.4
USP12-203ENST00000620323 CUBNO60494 3623 aa0.04□□□□□ -2.4
USP12-203ENST00000620323 VPS13BQ7Z7G8 4022 aa0.04□□□□□ -2.4
USP12-203ENST00000620323 UTP20O75691 2785 aaKnown RBP0.04□□□□□ -2.4
USP12-203ENST00000620323 DNAH11Q96DT5 4516 aa0.03□□□□□ -2.4
USP12-203ENST00000620323 KIF21BO75037 1637 aa0.03□□□□□ -2.4
USP12-203ENST00000620323 PKHD1L1Q86WI1 4243 aa0.03□□□□□ -2.4
USP12-203ENST00000620323 SMIM2Q9BVW6 85 aa0.03□□□□□ -2.4
USP12-203ENST00000620323 DDX60Q8IY21 1712 aaKnown RBP0.03□□□□□ -2.4
USP12-203ENST00000620323 SVEP1Q4LDE5 3571 aa0.03□□□□□ -2.4
USP12-203ENST00000620323 DNAH3Q8TD57 4116 aa0.03□□□□□ -2.4
USP12-203ENST00000620323 ACACBO00763 2458 aa0.03□□□□□ -2.41
USP12-203ENST00000620323 MYO18BQ8IUG5 2567 aa0.02□□□□□ -2.41
USP12-203ENST00000620323 IQGAP1P46940 1657 aa0.02□□□□□ -2.41
USP12-203ENST00000620323 FAM208AQ9UK61 1670 aaKnown RBP0.02□□□□□ -2.41
USP12-203ENST00000620323 TNP1P09430 55 aa0.02□□□□□ -2.41
USP12-203ENST00000620323 VPS13DQ5THJ4 4388 aa0.02□□□□□ -2.41
USP12-203ENST00000620323 ANKRD11Q6UB99 2663 aaPredicted RBP0.01□□□□□ -2.41
USP12-203ENST00000620323 SRRM2Q9UQ35 2752 aaKnown RBP0.01□□□□□ -2.41
USP12-203ENST00000620323 APOBP04114 4563 aaKnown RBP0.01□□□□□ -2.41
USP12-203ENST00000620323 SACSQ9NZJ4 4579 aa0.01□□□□□ -2.41
USP12-203ENST00000620323 MGAM2Q2M2H8 2515 aa0.01□□□□□ -2.41
USP12-203ENST00000620323 LINC01546A6NGU7 62 aa0.01□□□□□ -2.41
USP12-203ENST00000620323 SPRR2EP22531 72 aa0.01□□□□□ -2.41
USP12-203ENST00000620323 TOMM5Q8N4H5 51 aa0.01□□□□□ -2.41
USP12-203ENST00000620323 TEP1Q99973 2627 aaKnown RBP0.01□□□□□ -2.41
USP12-203ENST00000620323 DNAH2Q9P225 4427 aa0.01□□□□□ -2.41
USP12-203ENST00000620323 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
USP12-203ENST00000620323 ZZEF1O43149 2961 aa0□□□□□ -2.41
USP12-203ENST00000620323 DMXL1Q9Y485 3027 aa0□□□□□ -2.41
USP12-203ENST00000620323 A8MTW9 85 aa0□□□□□ -2.41
USP12-203ENST00000620323 M0QZ58 72 aa0□□□□□ -2.41
USP12-203ENST00000620323 NFAT5O94916 1531 aa0□□□□□ -2.41
USP12-203ENST00000620323 MT1AP04731 61 aa0□□□□□ -2.41
USP12-203ENST00000620323 DEFB131AP59861 70 aa0□□□□□ -2.41
USP12-203ENST00000620323 MAP1AP78559 2803 aaPredicted RBP-0□□□□□ -2.41
USP12-203ENST00000620323 TGP01266 2768 aa-0□□□□□ -2.41
USP12-203ENST00000620323 TLN2Q9Y4G6 2542 aa-0.01□□□□□ -2.41
USP12-203ENST00000620323 SPRR2FQ96RM1 72 aa-0.01□□□□□ -2.41
USP12-203ENST00000620323 DNAH6Q9C0G6 4158 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.02□□□□□ -2.41
USP12-203ENST00000620323 NBEAL2Q6ZNJ1 2754 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 HIVEP1P15822 2718 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 USP9XQ93008 2570 aaPredicted RBP-0.02□□□□□ -2.41
USP12-203ENST00000620323 NDUFA1O15239 70 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 KRTAP19-7Q3SYF9 63 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 CLPSL2Q6UWE3 100 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 MXRA5Q9NR99 2828 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 IQGAP2Q13576 1575 aa-0.02□□□□□ -2.41
USP12-203ENST00000620323 AKAP9Q99996 3911 aa-0.03□□□□□ -2.41
USP12-203ENST00000620323 DNAH1Q9P2D7 4330 aa-0.03□□□□□ -2.41
USP12-203ENST00000620323 POLR2KP53803 58 aaKnown RBP-0.03□□□□□ -2.41
USP12-203ENST00000620323 KRTAP6-1Q3LI64 71 aa-0.03□□□□□ -2.41
USP12-203ENST00000620323 COL6A5A8TX70 2615 aa-0.03□□□□□ -2.41
USP12-203ENST00000620323 DNAH8Q96JB1 4490 aa-0.03□□□□□ -2.41
USP12-203ENST00000620323 PCLOQ9Y6V0 5065 aa-0.04□□□□□ -2.42
USP12-203ENST00000620323 CLTCL1P53675 1640 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms