RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
LAPTM4B-204ENST00000619747 ANAPC11Q9NYG5 84 aa11.79□□□□□ -0.52
LAPTM4B-204ENST00000619747 KRTAP21-3Q3LHN1 58 aa11.79□□□□□ -0.52
LAPTM4B-204ENST00000619747 H3BS24 57 aa11.78□□□□□ -0.52
LAPTM4B-204ENST00000619747 KRTAP10-2P60368 255 aa11.77□□□□□ -0.53
LAPTM4B-204ENST00000619747 WWC2-AS2Q96NR7 200 aa11.77□□□□□ -0.53
LAPTM4B-204ENST00000619747 DNAH11Q96DT5 4516 aa11.75□□□□□ -0.53
LAPTM4B-204ENST00000619747 IGLV8-61A0A075B6I0 122 aa11.75□□□□□ -0.53
LAPTM4B-204ENST00000619747 SPAG11AQ6PDA7 123 aa11.75□□□□□ -0.53
LAPTM4B-204ENST00000619747 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
LAPTM4B-204ENST00000619747 SPRR1BP22528 89 aa11.74□□□□□ -0.53
LAPTM4B-204ENST00000619747 PRAC1Q96KF2 57 aa11.74□□□□□ -0.53
LAPTM4B-204ENST00000619747 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
LAPTM4B-204ENST00000619747 SPINK7P58062 85 aa11.72□□□□□ -0.53
LAPTM4B-204ENST00000619747 DNAH5Q8TE73 4624 aa11.71□□□□□ -0.54
LAPTM4B-204ENST00000619747 LINC00313P59037 77 aa11.68□□□□□ -0.54
LAPTM4B-204ENST00000619747 KRTAP29-1A8MX34 341 aaPredicted RBP11.66□□□□□ -0.54
LAPTM4B-204ENST00000619747 CIRBP-AS1Q8TBR5 109 aa11.65□□□□□ -0.54
LAPTM4B-204ENST00000619747 ZNF861PO60384 105 aa11.64□□□□□ -0.55
LAPTM4B-204ENST00000619747 CASC2Q6XLA1 102 aa11.64□□□□□ -0.55
LAPTM4B-204ENST00000619747 ADM2Q7Z4H4 148 aa11.64□□□□□ -0.55
LAPTM4B-204ENST00000619747 LINC01558Q9Y6Z2 57 aa11.64□□□□□ -0.55
LAPTM4B-204ENST00000619747 H3BPC8 53 aa11.63□□□□□ -0.55
LAPTM4B-204ENST00000619747 PCOTHQ58A44 107 aa11.62□□□□□ -0.55
LAPTM4B-204ENST00000619747 IGLV7-46A0A075B6I9 117 aa11.61□□□□□ -0.55
LAPTM4B-204ENST00000619747 FAT2Q9NYQ8 4349 aa11.59□□□□□ -0.55
LAPTM4B-204ENST00000619747 KRTAP10-1P60331 282 aa11.58□□□□□ -0.56
LAPTM4B-204ENST00000619747 IGLV7-43P04211 117 aa11.57□□□□□ -0.56
LAPTM4B-204ENST00000619747 LRP1BQ9NZR2 4599 aa11.57□□□□□ -0.56
LAPTM4B-204ENST00000619747 PKD1P98161 4303 aa11.56□□□□□ -0.56
LAPTM4B-204ENST00000619747 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
LAPTM4B-204ENST00000619747 LINC00483Q53H64 154 aa11.56□□□□□ -0.56
LAPTM4B-204ENST00000619747 LINC00472Q9H8W2 130 aa11.56□□□□□ -0.56
LAPTM4B-204ENST00000619747 ZNF706Q9Y5V0 76 aaPredicted RBP11.55□□□□□ -0.56
LAPTM4B-204ENST00000619747 LINC01554Q52M75 96 aa11.54□□□□□ -0.56
LAPTM4B-204ENST00000619747 PKHD1P08F94 4074 aa11.52□□□□□ -0.57
LAPTM4B-204ENST00000619747 A8MWP4 228 aa11.47□□□□□ -0.57
LAPTM4B-204ENST00000619747 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
LAPTM4B-204ENST00000619747 HRES1P13985 223 aa11.45□□□□□ -0.58
LAPTM4B-204ENST00000619747 VPS13BQ7Z7G8 4022 aa11.44□□□□□ -0.58
LAPTM4B-204ENST00000619747 Q96NJ1 140 aa11.44□□□□□ -0.58
LAPTM4B-204ENST00000619747 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
LAPTM4B-204ENST00000619747 Q6ZSA8 131 aa11.41□□□□□ -0.58
LAPTM4B-204ENST00000619747 PRR26Q8N8Z3 221 aa11.4□□□□□ -0.58
LAPTM4B-204ENST00000619747 PLA2G1BP04054 148 aaKnown RBP11.4□□□□□ -0.58
LAPTM4B-204ENST00000619747 A0A087X002 238 aa11.38□□□□□ -0.59
LAPTM4B-204ENST00000619747 IGHV6-1A0A0B4J1U7 121 aa11.38□□□□□ -0.59
LAPTM4B-204ENST00000619747 MMP24-AS1A0A0U1RRL7 71 aa11.36□□□□□ -0.59
LAPTM4B-204ENST00000619747 NOTCH2NLQ7Z3S9 236 aa11.32□□□□□ -0.6
LAPTM4B-204ENST00000619747 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
LAPTM4B-204ENST00000619747 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
LAPTM4B-204ENST00000619747 SMR3BP02814 79 aaPredicted RBP11.28□□□□□ -0.6
LAPTM4B-204ENST00000619747 KMT2CQ8NEZ4 4911 aaKnown RBP11.27□□□□□ -0.61
LAPTM4B-204ENST00000619747 C8orf17Q9NRJ1 99 aa11.27□□□□□ -0.61
LAPTM4B-204ENST00000619747 A0A1B0GVX0 72 aa11.26□□□□□ -0.61
LAPTM4B-204ENST00000619747 SSBP3-AS1Q7Z2R9 100 aa11.24□□□□□ -0.61
LAPTM4B-204ENST00000619747 DYNC1H1Q14204 4646 aaKnown RBP11.22□□□□□ -0.61
LAPTM4B-204ENST00000619747 CSAG1Q6PB30 78 aa11.22□□□□□ -0.61
LAPTM4B-204ENST00000619747 RETNLBQ9BQ08 111 aa11.22□□□□□ -0.61
LAPTM4B-204ENST00000619747 KRTAP1-4P0C5Y4 121 aa11.21□□□□□ -0.62
LAPTM4B-204ENST00000619747 TP53AIP1Q9HCN2 124 aa11.2□□□□□ -0.62
LAPTM4B-204ENST00000619747 FAT1Q14517 4588 aa11.2□□□□□ -0.62
LAPTM4B-204ENST00000619747 ASB16-AS1Q495Z4 193 aa11.14□□□□□ -0.63
LAPTM4B-204ENST00000619747 MRPL34Q9BQ48 92 aaKnown RBP11.13□□□□□ -0.63
LAPTM4B-204ENST00000619747 RYR2Q92736 4967 aa11.12□□□□□ -0.63
LAPTM4B-204ENST00000619747 SPATA8Q6RVD6 105 aa11.11□□□□□ -0.63
LAPTM4B-204ENST00000619747 TYMSOSQ8TAI1 123 aa11.09□□□□□ -0.63
LAPTM4B-204ENST00000619747 A0A1B0GU69 56 aa11.09□□□□□ -0.63
LAPTM4B-204ENST00000619747 A0A1B0GVY2 172 aa11.06□□□□□ -0.64
LAPTM4B-204ENST00000619747 MIR22HGQ0VDD5 57 aa11.05□□□□□ -0.64
LAPTM4B-204ENST00000619747 APOBP04114 4563 aaKnown RBP11.03□□□□□ -0.64
LAPTM4B-204ENST00000619747 ACYP2P14621 99 aa11.03□□□□□ -0.64
LAPTM4B-204ENST00000619747 Q5W150 140 aa11.02□□□□□ -0.64
LAPTM4B-204ENST00000619747 UQCR11O14957 56 aa10.97□□□□□ -0.65
LAPTM4B-204ENST00000619747 LINC00304Q8N9R0 145 aa10.91□□□□□ -0.66
LAPTM4B-204ENST00000619747 SPINK1P00995 79 aa10.9□□□□□ -0.66
LAPTM4B-204ENST00000619747 RYR3Q15413 4870 aa10.89□□□□□ -0.67
LAPTM4B-204ENST00000619747 KRTAP10-4P60372 401 aaPredicted RBP10.88□□□□□ -0.67
LAPTM4B-204ENST00000619747 DMAC1Q96GE9 116 aa10.86□□□□□ -0.67
LAPTM4B-204ENST00000619747 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
LAPTM4B-204ENST00000619747 FLG2Q5D862 2391 aaPredicted RBP10.82□□□□□ -0.68
LAPTM4B-204ENST00000619747 KRTAP16-1A8MUX0 517 aa10.82□□□□□ -0.68
LAPTM4B-204ENST00000619747 ROMO1P60602 79 aa10.81□□□□□ -0.68
LAPTM4B-204ENST00000619747 LRP1Q07954 4544 aaKnown RBP10.8□□□□□ -0.68
LAPTM4B-204ENST00000619747 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
LAPTM4B-204ENST00000619747 DMBT1Q9UGM3 2413 aaPredicted RBP10.75□□□□□ -0.69
LAPTM4B-204ENST00000619747 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
LAPTM4B-204ENST00000619747 IGKV2D-30A0A075B6S6 120 aa10.72□□□□□ -0.69
LAPTM4B-204ENST00000619747 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
LAPTM4B-204ENST00000619747 PKHD1L1Q86WI1 4243 aa10.71□□□□□ -0.69
LAPTM4B-204ENST00000619747 KRTAP25-1Q3LHN0 102 aa10.7□□□□□ -0.7
LAPTM4B-204ENST00000619747 HSPG2P98160 4391 aa10.7□□□□□ -0.7
LAPTM4B-204ENST00000619747 KIAA1109Q2LD37 5005 aa10.65□□□□□ -0.7
LAPTM4B-204ENST00000619747 Q5VSD8 79 aa10.65□□□□□ -0.71
LAPTM4B-204ENST00000619747 RPS29P62273 56 aaKnown RBP10.64□□□□□ -0.71
LAPTM4B-204ENST00000619747 KRTAP17-1Q9BYP8 105 aa10.61□□□□□ -0.71
LAPTM4B-204ENST00000619747 Q8N1X5 172 aa10.6□□□□□ -0.71
LAPTM4B-204ENST00000619747 P0C880 135 aa10.59□□□□□ -0.71
LAPTM4B-204ENST00000619747 MYCBP2O75592 4640 aa10.58□□□□□ -0.72
LAPTM4B-204ENST00000619747 RYR1P21817 5038 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms