RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 RETNLBQ9BQ08 111 aa4.75□□□□□ -1.65
TVP23A-211ENST00000619408 KRTAP10-1P60331 282 aa4.74□□□□□ -1.65
TVP23A-211ENST00000619408 Q6ZSA8 131 aa4.74□□□□□ -1.65
TVP23A-211ENST00000619408 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
TVP23A-211ENST00000619408 COA5Q86WW8 74 aa4.74□□□□□ -1.65
TVP23A-211ENST00000619408 TP53AIP1Q9HCN2 124 aa4.74□□□□□ -1.65
TVP23A-211ENST00000619408 VPS13DQ5THJ4 4388 aa4.74□□□□□ -1.65
TVP23A-211ENST00000619408 PLECQ15149 4684 aaKnown RBP4.73□□□□□ -1.65
TVP23A-211ENST00000619408 H0Y9J4 135 aa4.73□□□□□ -1.65
TVP23A-211ENST00000619408 PRLHP81277 87 aa4.73□□□□□ -1.65
TVP23A-211ENST00000619408 KRTAP11-1Q8IUC1 163 aa4.73□□□□□ -1.65
TVP23A-211ENST00000619408 Q8N9L7 120 aa4.73□□□□□ -1.65
TVP23A-211ENST00000619408 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
TVP23A-211ENST00000619408 H0Y9P7 68 aa4.72□□□□□ -1.65
TVP23A-211ENST00000619408 LINC00313P59037 77 aa4.72□□□□□ -1.65
TVP23A-211ENST00000619408 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
TVP23A-211ENST00000619408 DSCR10P59022 87 aa4.71□□□□□ -1.66
TVP23A-211ENST00000619408 C1orf137Q5JT78 98 aa4.71□□□□□ -1.66
TVP23A-211ENST00000619408 DEFB105AQ8NG35 78 aa4.71□□□□□ -1.66
TVP23A-211ENST00000619408 PSORS1C2Q9UIG4 136 aa4.71□□□□□ -1.66
TVP23A-211ENST00000619408 HERC2O95714 4834 aa4.71□□□□□ -1.66
TVP23A-211ENST00000619408 RYR2Q92736 4967 aa4.71□□□□□ -1.66
TVP23A-211ENST00000619408 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
TVP23A-211ENST00000619408 KRTAP13-1Q8IUC0 172 aa4.68□□□□□ -1.66
TVP23A-211ENST00000619408 ST20-AS1Q8NBB2 130 aa4.68□□□□□ -1.66
TVP23A-211ENST00000619408 A0A1W2PNM2 257 aa4.67□□□□□ -1.66
TVP23A-211ENST00000619408 Q8N377 158 aa4.67□□□□□ -1.66
TVP23A-211ENST00000619408 ZNF706Q9Y5V0 76 aaPredicted RBP4.67□□□□□ -1.66
TVP23A-211ENST00000619408 DNAH6Q9C0G6 4158 aa4.66□□□□□ -1.66
TVP23A-211ENST00000619408 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
TVP23A-211ENST00000619408 KMT2AQ03164 3969 aa4.66□□□□□ -1.66
TVP23A-211ENST00000619408 K7EQZ3 153 aa4.66□□□□□ -1.66
TVP23A-211ENST00000619408 ZNF861PO60384 105 aa4.66□□□□□ -1.66
TVP23A-211ENST00000619408 IGLV7-43P04211 117 aa4.66□□□□□ -1.66
TVP23A-211ENST00000619408 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
TVP23A-211ENST00000619408 A8MU10 97 aa4.65□□□□□ -1.67
TVP23A-211ENST00000619408 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.67
TVP23A-211ENST00000619408 PRR4Q16378 134 aa4.64□□□□□ -1.67
TVP23A-211ENST00000619408 XP32Q5T750 250 aa4.64□□□□□ -1.67
TVP23A-211ENST00000619408 SPRR1BP22528 89 aa4.63□□□□□ -1.67
TVP23A-211ENST00000619408 SPAG11AQ6PDA7 123 aa4.63□□□□□ -1.67
TVP23A-211ENST00000619408 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
TVP23A-211ENST00000619408 A8MWP4 228 aa4.62□□□□□ -1.67
TVP23A-211ENST00000619408 RPL37AP61513 92 aaKnown RBP4.62□□□□□ -1.67
TVP23A-211ENST00000619408 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
TVP23A-211ENST00000619408 IGHV6-1A0A0B4J1U7 121 aa4.6□□□□□ -1.67
TVP23A-211ENST00000619408 SPINK7P58062 85 aa4.59□□□□□ -1.67
TVP23A-211ENST00000619408 DNAH17Q9UFH2 4485 aa4.59□□□□□ -1.67
TVP23A-211ENST00000619408 IGLV9-49A0A0B4J1Y8 123 aa4.58□□□□□ -1.68
TVP23A-211ENST00000619408 UQCR11O14957 56 aa4.58□□□□□ -1.68
TVP23A-211ENST00000619408 SMR3BP02814 79 aaPredicted RBP4.58□□□□□ -1.68
TVP23A-211ENST00000619408 ACYP2P14621 99 aa4.58□□□□□ -1.68
TVP23A-211ENST00000619408 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
TVP23A-211ENST00000619408 IGFL1Q6UW32 110 aa4.57□□□□□ -1.68
TVP23A-211ENST00000619408 CDK2AP2O75956 126 aa4.56□□□□□ -1.68
TVP23A-211ENST00000619408 SPINK6Q6UWN8 80 aa4.56□□□□□ -1.68
TVP23A-211ENST00000619408 WFDC13Q8IUB5 93 aa4.56□□□□□ -1.68
TVP23A-211ENST00000619408 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
TVP23A-211ENST00000619408 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
TVP23A-211ENST00000619408 FAM229AH3BQW9 127 aa4.55□□□□□ -1.68
TVP23A-211ENST00000619408 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
TVP23A-211ENST00000619408 ANAPC11Q9NYG5 84 aa4.54□□□□□ -1.68
TVP23A-211ENST00000619408 HRES1P13985 223 aa4.53□□□□□ -1.68
TVP23A-211ENST00000619408 FAT2Q9NYQ8 4349 aa4.53□□□□□ -1.68
TVP23A-211ENST00000619408 A0A0G2JQZ4 141 aa4.52□□□□□ -1.69
TVP23A-211ENST00000619408 A0A1B0GU69 56 aa4.52□□□□□ -1.69
TVP23A-211ENST00000619408 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
TVP23A-211ENST00000619408 A0A087WSZ3 146 aa4.51□□□□□ -1.69
TVP23A-211ENST00000619408 KRTAP1-4P0C5Y4 121 aa4.51□□□□□ -1.69
TVP23A-211ENST00000619408 SSBP3-AS1Q7Z2R9 100 aa4.51□□□□□ -1.69
TVP23A-211ENST00000619408 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
TVP23A-211ENST00000619408 LINC00472Q9H8W2 130 aa4.51□□□□□ -1.69
TVP23A-211ENST00000619408 KRTAP10-4P60372 401 aaPredicted RBP4.5□□□□□ -1.69
TVP23A-211ENST00000619408 Q5VSD8 79 aa4.5□□□□□ -1.69
TVP23A-211ENST00000619408 PKD1P98161 4303 aa4.49□□□□□ -1.69
TVP23A-211ENST00000619408 MMP24-AS1A0A0U1RRL7 71 aa4.49□□□□□ -1.69
TVP23A-211ENST00000619408 ROMO1P60602 79 aa4.49□□□□□ -1.69
TVP23A-211ENST00000619408 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
TVP23A-211ENST00000619408 TYMSOSQ8TAI1 123 aa4.48□□□□□ -1.69
TVP23A-211ENST00000619408 KRTAP13-2Q52LG2 175 aa4.47□□□□□ -1.69
TVP23A-211ENST00000619408 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
TVP23A-211ENST00000619408 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
TVP23A-211ENST00000619408 DNAH11Q96DT5 4516 aa4.47□□□□□ -1.69
TVP23A-211ENST00000619408 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
TVP23A-211ENST00000619408 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
TVP23A-211ENST00000619408 Q8N1X5 172 aa4.45□□□□□ -1.7
TVP23A-211ENST00000619408 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
TVP23A-211ENST00000619408 KIAA1109Q2LD37 5005 aa4.45□□□□□ -1.7
TVP23A-211ENST00000619408 HERC1Q15751 4861 aa4.44□□□□□ -1.7
TVP23A-211ENST00000619408 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
TVP23A-211ENST00000619408 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
TVP23A-211ENST00000619408 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
TVP23A-211ENST00000619408 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
TVP23A-211ENST00000619408 PCOTHQ58A44 107 aa4.43□□□□□ -1.7
TVP23A-211ENST00000619408 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
TVP23A-211ENST00000619408 SPINK1P00995 79 aa4.42□□□□□ -1.7
TVP23A-211ENST00000619408 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
TVP23A-211ENST00000619408 C8orf17Q9NRJ1 99 aa4.42□□□□□ -1.7
TVP23A-211ENST00000619408 DEFB116Q30KQ4 102 aa4.41□□□□□ -1.7
TVP23A-211ENST00000619408 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms