RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 UQCR11O14957 56 aa8.87□□□□□ -0.99
SRRT-217ENST00000618411 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
SRRT-217ENST00000618411 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
SRRT-217ENST00000618411 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
SRRT-217ENST00000618411 NOTCH1P46531 2555 aa8.84□□□□□ -0.99
SRRT-217ENST00000618411 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
SRRT-217ENST00000618411 DNAH3Q8TD57 4116 aa8.84□□□□□ -0.99
SRRT-217ENST00000618411 CSMD3Q7Z407 3707 aa8.84□□□□□ -0.99
SRRT-217ENST00000618411 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
SRRT-217ENST00000618411 LYSTQ99698 3801 aa8.84□□□□□ -1
SRRT-217ENST00000618411 ANAPC11Q9NYG5 84 aa8.83□□□□□ -1
SRRT-217ENST00000618411 NBEAL1Q6ZS30 2694 aa8.82□□□□□ -1
SRRT-217ENST00000618411 DNAH9Q9NYC9 4486 aa8.81□□□□□ -1
SRRT-217ENST00000618411 COL6A5A8TX70 2615 aa8.81□□□□□ -1
SRRT-217ENST00000618411 FAM229AH3BQW9 127 aa8.81□□□□□ -1
SRRT-217ENST00000618411 APLNQ9ULZ1 77 aa8.8□□□□□ -1
SRRT-217ENST00000618411 CMYA5Q8N3K9 4069 aa8.8□□□□□ -1
SRRT-217ENST00000618411 ZNF861PO60384 105 aa8.79□□□□□ -1
SRRT-217ENST00000618411 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
SRRT-217ENST00000618411 IGLV5-52A0A0A0MRZ9 124 aa8.79□□□□□ -1
SRRT-217ENST00000618411 STAB1Q9NY15 2570 aa8.79□□□□□ -1
SRRT-217ENST00000618411 IGKV2-30P06310 120 aa8.78□□□□□ -1
SRRT-217ENST00000618411 HUWE1Q7Z6Z7 4374 aaKnown RBP8.77□□□□□ -1.01
SRRT-217ENST00000618411 KRTAP24-1Q3LI83 254 aa8.77□□□□□ -1.01
SRRT-217ENST00000618411 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
SRRT-217ENST00000618411 Q6ZRN7 208 aaPredicted RBP8.76□□□□□ -1.01
SRRT-217ENST00000618411 NBDYA0A0U1RRE5 68 aa8.75□□□□□ -1.01
SRRT-217ENST00000618411 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
SRRT-217ENST00000618411 H3BS24 57 aa8.72□□□□□ -1.01
SRRT-217ENST00000618411 CIRBP-AS1Q8TBR5 109 aa8.71□□□□□ -1.01
SRRT-217ENST00000618411 STAB2Q8WWQ8 2551 aa8.68□□□□□ -1.02
SRRT-217ENST00000618411 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
SRRT-217ENST00000618411 IGLV7-43P04211 117 aa8.66□□□□□ -1.02
SRRT-217ENST00000618411 DNAH8Q96JB1 4490 aa8.63□□□□□ -1.03
SRRT-217ENST00000618411 A0A087WTM6 91 aa8.63□□□□□ -1.03
SRRT-217ENST00000618411 IGKV2D-30A0A075B6S6 120 aa8.6□□□□□ -1.03
SRRT-217ENST00000618411 KRTAP16-1A8MUX0 517 aa8.59□□□□□ -1.03
SRRT-217ENST00000618411 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
SRRT-217ENST00000618411 DNAH7Q8WXX0 4024 aa8.55□□□□□ -1.04
SRRT-217ENST00000618411 FRAS1Q86XX4 4008 aa8.52□□□□□ -1.04
SRRT-217ENST00000618411 LY6G6CO95867 125 aa8.51□□□□□ -1.05
SRRT-217ENST00000618411 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
SRRT-217ENST00000618411 A8MUU9 505 aa8.49□□□□□ -1.05
SRRT-217ENST00000618411 C1orf134Q5TEV5 83 aa8.48□□□□□ -1.05
SRRT-217ENST00000618411 SPINK1P00995 79 aa8.47□□□□□ -1.05
SRRT-217ENST00000618411 HECTD4Q9Y4D8 3996 aa8.47□□□□□ -1.05
SRRT-217ENST00000618411 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
SRRT-217ENST00000618411 Q6ZSA8 131 aa8.45□□□□□ -1.06
SRRT-217ENST00000618411 MGAM2Q2M2H8 2515 aa8.45□□□□□ -1.06
SRRT-217ENST00000618411 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
SRRT-217ENST00000618411 H0YAA0 97 aa8.44□□□□□ -1.06
SRRT-217ENST00000618411 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
SRRT-217ENST00000618411 MEGF8Q7Z7M0 2845 aa8.44□□□□□ -1.06
SRRT-217ENST00000618411 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
SRRT-217ENST00000618411 Q8N1X5 172 aa8.4□□□□□ -1.06
SRRT-217ENST00000618411 TGP01266 2768 aa8.4□□□□□ -1.06
SRRT-217ENST00000618411 ROMO1P60602 79 aa8.4□□□□□ -1.07
SRRT-217ENST00000618411 DNAH17Q9UFH2 4485 aa8.38□□□□□ -1.07
SRRT-217ENST00000618411 VPS13DQ5THJ4 4388 aa8.37□□□□□ -1.07
SRRT-217ENST00000618411 A0A1B0GU33 70 aa8.35□□□□□ -1.07
SRRT-217ENST00000618411 TYMSOSQ8TAI1 123 aa8.32□□□□□ -1.08
SRRT-217ENST00000618411 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
SRRT-217ENST00000618411 FBN3Q75N90 2809 aa8.29□□□□□ -1.08
SRRT-217ENST00000618411 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
SRRT-217ENST00000618411 K7ERS5 55 aa8.23□□□□□ -1.09
SRRT-217ENST00000618411 DNAH2Q9P225 4427 aa8.22□□□□□ -1.09
SRRT-217ENST00000618411 STARD9Q9P2P6 4700 aa8.2□□□□□ -1.1
SRRT-217ENST00000618411 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
SRRT-217ENST00000618411 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
SRRT-217ENST00000618411 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
SRRT-217ENST00000618411 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
SRRT-217ENST00000618411 PRKDCP78527 4128 aaKnown RBP8.16□□□□□ -1.1
SRRT-217ENST00000618411 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
SRRT-217ENST00000618411 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
SRRT-217ENST00000618411 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
SRRT-217ENST00000618411 P0C880 135 aa8.13□□□□□ -1.11
SRRT-217ENST00000618411 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
SRRT-217ENST00000618411 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
SRRT-217ENST00000618411 DNAH6Q9C0G6 4158 aa8.09□□□□□ -1.11
SRRT-217ENST00000618411 C20orf166-AS1Q96NR2 134 aa8.08□□□□□ -1.12
SRRT-217ENST00000618411 KRTAP10-1P60331 282 aa8.07□□□□□ -1.12
SRRT-217ENST00000618411 LRP1BQ9NZR2 4599 aa8.05□□□□□ -1.12
SRRT-217ENST00000618411 DNAH5Q8TE73 4624 aa8.04□□□□□ -1.12
SRRT-217ENST00000618411 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
SRRT-217ENST00000618411 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
SRRT-217ENST00000618411 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
SRRT-217ENST00000618411 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
SRRT-217ENST00000618411 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
SRRT-217ENST00000618411 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.15
SRRT-217ENST00000618411 PKD1P98161 4303 aa7.87□□□□□ -1.15
SRRT-217ENST00000618411 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
SRRT-217ENST00000618411 A0A0D9SG42 100 aa7.83□□□□□ -1.16
SRRT-217ENST00000618411 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
SRRT-217ENST00000618411 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
SRRT-217ENST00000618411 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
SRRT-217ENST00000618411 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
SRRT-217ENST00000618411 NDUFAF8A1L188 74 aa7.78□□□□□ -1.16
SRRT-217ENST00000618411 SACSQ9NZJ4 4579 aa7.78□□□□□ -1.16
SRRT-217ENST00000618411 DNHD1Q96M86 4753 aa7.74□□□□□ -1.17
SRRT-217ENST00000618411 FAT2Q9NYQ8 4349 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms