RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
PDE6A-205ENST00000617647 FBN2P35556 2912 aa4.38□□□□□ -1.71
PDE6A-205ENST00000617647 KRTAP7-1Q8IUC3 87 aa4.38□□□□□ -1.71
PDE6A-205ENST00000617647 USP24Q9UPU5 2620 aa4.38□□□□□ -1.71
PDE6A-205ENST00000617647 ZANQ9Y493 2812 aa4.37□□□□□ -1.71
PDE6A-205ENST00000617647 A0A0D9SG42 100 aa4.36□□□□□ -1.71
PDE6A-205ENST00000617647 ITPR3Q14573 2671 aa4.36□□□□□ -1.71
PDE6A-205ENST00000617647 PSORS1C2Q9UIG4 136 aa4.36□□□□□ -1.71
PDE6A-205ENST00000617647 APLNQ9ULZ1 77 aa4.36□□□□□ -1.71
PDE6A-205ENST00000617647 FLNAP21333 2647 aaKnown RBP4.35□□□□□ -1.71
PDE6A-205ENST00000617647 P0C880 135 aa4.35□□□□□ -1.71
PDE6A-205ENST00000617647 MXRA5Q9NR99 2828 aa4.34□□□□□ -1.71
PDE6A-205ENST00000617647 UBR5O95071 2799 aaPredicted RBP4.34□□□□□ -1.72
PDE6A-205ENST00000617647 KRTAP1-1Q07627 177 aa4.34□□□□□ -1.72
PDE6A-205ENST00000617647 Q96NJ1 140 aa4.34□□□□□ -1.72
PDE6A-205ENST00000617647 SPACA4Q8TDM5 124 aa4.33□□□□□ -1.72
PDE6A-205ENST00000617647 KRTAP11-1Q8IUC1 163 aa4.32□□□□□ -1.72
PDE6A-205ENST00000617647 PANO1I0J062 215 aa4.32□□□□□ -1.72
PDE6A-205ENST00000617647 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
PDE6A-205ENST00000617647 SMR3AQ99954 134 aa4.31□□□□□ -1.72
PDE6A-205ENST00000617647 TEP1Q99973 2627 aaKnown RBP4.31□□□□□ -1.72
PDE6A-205ENST00000617647 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
PDE6A-205ENST00000617647 KRTAP10-3P60369 221 aa4.29□□□□□ -1.72
PDE6A-205ENST00000617647 H0YAA0 97 aa4.27□□□□□ -1.73
PDE6A-205ENST00000617647 Q6ZSA8 131 aa4.27□□□□□ -1.73
PDE6A-205ENST00000617647 COL6A5A8TX70 2615 aa4.27□□□□□ -1.73
PDE6A-205ENST00000617647 ATRQ13535 2644 aa4.26□□□□□ -1.73
PDE6A-205ENST00000617647 KMT2BQ9UMN6 2715 aaPredicted RBP4.25□□□□□ -1.73
PDE6A-205ENST00000617647 WWC2-AS2Q96NR7 200 aa4.24□□□□□ -1.73
PDE6A-205ENST00000617647 NBEAL1Q6ZS30 2694 aa4.24□□□□□ -1.73
PDE6A-205ENST00000617647 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
PDE6A-205ENST00000617647 NIPBLQ6KC79 2804 aaeCLIP4.24□□□□□ -1.73
PDE6A-205ENST00000617647 DNAH1Q9P2D7 4330 aa4.24□□□□□ -1.73
PDE6A-205ENST00000617647 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
PDE6A-205ENST00000617647 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
PDE6A-205ENST00000617647 HIVEP1P15822 2718 aa4.22□□□□□ -1.73
PDE6A-205ENST00000617647 ANK2Q01484 3957 aa4.21□□□□□ -1.73
PDE6A-205ENST00000617647 A0A087WTM6 91 aa4.21□□□□□ -1.73
PDE6A-205ENST00000617647 KRTAP24-1Q3LI83 254 aa4.2□□□□□ -1.74
PDE6A-205ENST00000617647 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
PDE6A-205ENST00000617647 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.18□□□□□ -1.74
PDE6A-205ENST00000617647 STAB2Q8WWQ8 2551 aa4.18□□□□□ -1.74
PDE6A-205ENST00000617647 DNAH3Q8TD57 4116 aa4.18□□□□□ -1.74
PDE6A-205ENST00000617647 NBDYA0A0U1RRE5 68 aa4.18□□□□□ -1.74
PDE6A-205ENST00000617647 HECTD1Q9ULT8 2610 aa4.17□□□□□ -1.74
PDE6A-205ENST00000617647 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
PDE6A-205ENST00000617647 ITPR2Q14571 2701 aa4.16□□□□□ -1.74
PDE6A-205ENST00000617647 PDZD2O15018 2839 aa4.16□□□□□ -1.74
PDE6A-205ENST00000617647 TRRAPQ9Y4A5 3859 aa4.16□□□□□ -1.74
PDE6A-205ENST00000617647 SRRM2Q9UQ35 2752 aaKnown RBP4.16□□□□□ -1.74
PDE6A-205ENST00000617647 TENM4Q6N022 2769 aa4.15□□□□□ -1.75
PDE6A-205ENST00000617647 KRTAP10-11P60412 298 aa4.15□□□□□ -1.75
PDE6A-205ENST00000617647 KRTAP21-3Q3LHN1 58 aa4.15□□□□□ -1.75
PDE6A-205ENST00000617647 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
PDE6A-205ENST00000617647 SEC61BP60468 96 aaKnown RBP4.14□□□□□ -1.75
PDE6A-205ENST00000617647 STAB1Q9NY15 2570 aa4.14□□□□□ -1.75
PDE6A-205ENST00000617647 KRTAP1-5Q9BYS1 174 aa4.14□□□□□ -1.75
PDE6A-205ENST00000617647 C9orf92A6NGG3 77 aa4.13□□□□□ -1.75
PDE6A-205ENST00000617647 NSD1Q96L73 2696 aaPredicted RBP4.13□□□□□ -1.75
PDE6A-205ENST00000617647 KRTAP13-1Q8IUC0 172 aa4.12□□□□□ -1.75
PDE6A-205ENST00000617647 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
PDE6A-205ENST00000617647 LYSTQ99698 3801 aa4.09□□□□□ -1.75
PDE6A-205ENST00000617647 TGP01266 2768 aa4.07□□□□□ -1.76
PDE6A-205ENST00000617647 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
PDE6A-205ENST00000617647 VWFP04275 2813 aa4.06□□□□□ -1.76
PDE6A-205ENST00000617647 MGAM2Q2M2H8 2515 aa4.06□□□□□ -1.76
PDE6A-205ENST00000617647 TENM1Q9UKZ4 2725 aa4.04□□□□□ -1.76
PDE6A-205ENST00000617647 PKD1L1Q8TDX9 2849 aa4.03□□□□□ -1.76
PDE6A-205ENST00000617647 CSMD3Q7Z407 3707 aa4.03□□□□□ -1.76
PDE6A-205ENST00000617647 OTOGQ6ZRI0 2925 aa4.03□□□□□ -1.76
PDE6A-205ENST00000617647 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
PDE6A-205ENST00000617647 S4R3F8 94 aa4.01□□□□□ -1.77
PDE6A-205ENST00000617647 DYNC2H1Q8NCM8 4307 aaKnown RBP4□□□□□ -1.77
PDE6A-205ENST00000617647 TENM3Q9P273 2699 aa4□□□□□ -1.77
PDE6A-205ENST00000617647 FBN1P35555 2871 aaKnown RBP3.98□□□□□ -1.77
PDE6A-205ENST00000617647 PLAC4Q8WY50 150 aa3.98□□□□□ -1.77
PDE6A-205ENST00000617647 FBN3Q75N90 2809 aa3.98□□□□□ -1.77
PDE6A-205ENST00000617647 DNAH9Q9NYC9 4486 aa3.97□□□□□ -1.77
PDE6A-205ENST00000617647 DNAH10Q8IVF4 4471 aa3.96□□□□□ -1.78
PDE6A-205ENST00000617647 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
PDE6A-205ENST00000617647 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
PDE6A-205ENST00000617647 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
PDE6A-205ENST00000617647 HUWE1Q7Z6Z7 4374 aaKnown RBP3.92□□□□□ -1.78
PDE6A-205ENST00000617647 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
PDE6A-205ENST00000617647 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
PDE6A-205ENST00000617647 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
PDE6A-205ENST00000617647 PRKDCP78527 4128 aaKnown RBP3.86□□□□□ -1.79
PDE6A-205ENST00000617647 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
PDE6A-205ENST00000617647 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
PDE6A-205ENST00000617647 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
PDE6A-205ENST00000617647 Q6ZRN7 208 aaPredicted RBP3.85□□□□□ -1.79
PDE6A-205ENST00000617647 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
PDE6A-205ENST00000617647 ALMS1Q8TCU4 4167 aa3.83□□□□□ -1.8
PDE6A-205ENST00000617647 M0QZ58 72 aa3.82□□□□□ -1.8
PDE6A-205ENST00000617647 R4GN34 69 aa3.81□□□□□ -1.8
PDE6A-205ENST00000617647 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
PDE6A-205ENST00000617647 VPS13DQ5THJ4 4388 aa3.79□□□□□ -1.8
PDE6A-205ENST00000617647 DNAH8Q96JB1 4490 aa3.79□□□□□ -1.8
PDE6A-205ENST00000617647 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
PDE6A-205ENST00000617647 RPS29P62273 56 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms