RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 KRTAP29-1A8MX34 341 aaPredicted RBP6.33□□□□□ -1.4
MMP28-206ENST00000616383 J3QR89 54 aa6.32□□□□□ -1.4
MMP28-206ENST00000616383 SPAG11AQ6PDA7 123 aa6.32□□□□□ -1.4
MMP28-206ENST00000616383 A0A1B0GW54 56 aa6.31□□□□□ -1.4
MMP28-206ENST00000616383 SPINK1P00995 79 aa6.31□□□□□ -1.4
MMP28-206ENST00000616383 FAM240AA0A1B0GVK7 77 aa6.3□□□□□ -1.4
MMP28-206ENST00000616383 SS18L2Q9UHA2 77 aa6.3□□□□□ -1.4
MMP28-206ENST00000616383 K7ERU9 68 aa6.29□□□□□ -1.4
MMP28-206ENST00000616383 ACYP1P07311 99 aa6.29□□□□□ -1.4
MMP28-206ENST00000616383 LIMD2Q9BT23 127 aa6.29□□□□□ -1.4
MMP28-206ENST00000616383 LINC00846Q9NV44 126 aa6.29□□□□□ -1.4
MMP28-206ENST00000616383 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
MMP28-206ENST00000616383 Q5XG85 94 aa6.27□□□□□ -1.41
MMP28-206ENST00000616383 Q6ZVQ6 151 aa6.26□□□□□ -1.41
MMP28-206ENST00000616383 UBL5Q9BZL1 73 aa6.25□□□□□ -1.41
MMP28-206ENST00000616383 NREPQ16612 68 aa6.24□□□□□ -1.41
MMP28-206ENST00000616383 ASB16-AS1Q495Z4 193 aa6.24□□□□□ -1.41
MMP28-206ENST00000616383 Q96NJ1 140 aa6.23□□□□□ -1.41
MMP28-206ENST00000616383 DEFB116Q30KQ4 102 aa6.22□□□□□ -1.41
MMP28-206ENST00000616383 LINC00472Q9H8W2 130 aa6.22□□□□□ -1.41
MMP28-206ENST00000616383 C1orf195Q5TG92 126 aa6.21□□□□□ -1.42
MMP28-206ENST00000616383 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
MMP28-206ENST00000616383 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
MMP28-206ENST00000616383 SIGMAR1Q99720 223 aa6.2□□□□□ -1.42
MMP28-206ENST00000616383 BPY2O14599 106 aa6.18□□□□□ -1.42
MMP28-206ENST00000616383 IGKV4-1P06312 121 aa6.18□□□□□ -1.42
MMP28-206ENST00000616383 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
MMP28-206ENST00000616383 J3KT08 172 aa6.17□□□□□ -1.42
MMP28-206ENST00000616383 IGKV3D-7A0A0C4DH55 119 aa6.16□□□□□ -1.42
MMP28-206ENST00000616383 DSCR10P59022 87 aa6.15□□□□□ -1.42
MMP28-206ENST00000616383 ATP5EP2Q5VTU8 51 aa6.15□□□□□ -1.42
MMP28-206ENST00000616383 CXCL6P80162 114 aa6.14□□□□□ -1.43
MMP28-206ENST00000616383 A8MWP4 228 aa6.13□□□□□ -1.43
MMP28-206ENST00000616383 Q8N9L7 120 aa6.13□□□□□ -1.43
MMP28-206ENST00000616383 K7EQZ3 153 aa6.12□□□□□ -1.43
MMP28-206ENST00000616383 FP248Q71RG6 208 aaPredicted RBP6.12□□□□□ -1.43
MMP28-206ENST00000616383 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
MMP28-206ENST00000616383 NDUFB1O75438 58 aa6.11□□□□□ -1.43
MMP28-206ENST00000616383 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
MMP28-206ENST00000616383 MT-ATP8P03928 68 aa6.1□□□□□ -1.43
MMP28-206ENST00000616383 PRR4Q16378 134 aa6.1□□□□□ -1.43
MMP28-206ENST00000616383 PRR15Q8IV56 129 aa6.1□□□□□ -1.43
MMP28-206ENST00000616383 IGLV7-46A0A075B6I9 117 aa6.09□□□□□ -1.43
MMP28-206ENST00000616383 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
MMP28-206ENST00000616383 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
MMP28-206ENST00000616383 C9orf92A6NGG3 77 aa6.05□□□□□ -1.44
MMP28-206ENST00000616383 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
MMP28-206ENST00000616383 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
MMP28-206ENST00000616383 C8orf17Q9NRJ1 99 aa6.05□□□□□ -1.44
MMP28-206ENST00000616383 A0A087WVE0 104 aa6.04□□□□□ -1.44
MMP28-206ENST00000616383 MMP24-AS1A0A0U1RRL7 71 aa6.04□□□□□ -1.44
MMP28-206ENST00000616383 LINC00313P59037 77 aa6.03□□□□□ -1.44
MMP28-206ENST00000616383 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
MMP28-206ENST00000616383 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
MMP28-206ENST00000616383 WFDC13Q8IUB5 93 aa6.02□□□□□ -1.45
MMP28-206ENST00000616383 IMUPQ9GZP8 106 aa6.02□□□□□ -1.45
MMP28-206ENST00000616383 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
MMP28-206ENST00000616383 hDV103S1A0JD37 113 aa6□□□□□ -1.45
MMP28-206ENST00000616383 KRTAP16-1A8MUX0 517 aa6□□□□□ -1.45
MMP28-206ENST00000616383 CASC2Q6XLA1 102 aa6□□□□□ -1.45
MMP28-206ENST00000616383 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
MMP28-206ENST00000616383 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
MMP28-206ENST00000616383 MRPL34Q9BQ48 92 aaKnown RBP5.97□□□□□ -1.45
MMP28-206ENST00000616383 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
MMP28-206ENST00000616383 FAM236AA0A1B0GUQ0 79 aa5.94□□□□□ -1.46
MMP28-206ENST00000616383 FAM236BA0A1B0GV22 79 aa5.94□□□□□ -1.46
MMP28-206ENST00000616383 LPAP08519 4548 aa5.94□□□□□ -1.46
MMP28-206ENST00000616383 A8MUU9 505 aa5.93□□□□□ -1.46
MMP28-206ENST00000616383 NDUFS5O43920 106 aa5.93□□□□□ -1.46
MMP28-206ENST00000616383 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
MMP28-206ENST00000616383 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
MMP28-206ENST00000616383 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.46
MMP28-206ENST00000616383 Q75L30 129 aa5.9□□□□□ -1.46
MMP28-206ENST00000616383 SCGB1A1P11684 91 aa5.89□□□□□ -1.47
MMP28-206ENST00000616383 LRP2P98164 4655 aa5.87□□□□□ -1.47
MMP28-206ENST00000616383 ATOX1O00244 68 aa5.86□□□□□ -1.47
MMP28-206ENST00000616383 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
MMP28-206ENST00000616383 TP53AIP1Q9HCN2 124 aa5.86□□□□□ -1.47
MMP28-206ENST00000616383 ZCCHC13Q8WW36 166 aaKnown RBP5.85□□□□□ -1.47
MMP28-206ENST00000616383 UQCRQO14949 82 aa5.83□□□□□ -1.48
MMP28-206ENST00000616383 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
MMP28-206ENST00000616383 PCOTHQ58A44 107 aa5.82□□□□□ -1.48
MMP28-206ENST00000616383 Q5W150 140 aa5.82□□□□□ -1.48
MMP28-206ENST00000616383 SMIM20Q8N5G0 67 aa5.82□□□□□ -1.48
MMP28-206ENST00000616383 TRAV7A0A075B6U4 112 aa5.81□□□□□ -1.48
MMP28-206ENST00000616383 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
MMP28-206ENST00000616383 MUC17Q685J3 4493 aa5.8□□□□□ -1.48
MMP28-206ENST00000616383 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
MMP28-206ENST00000616383 H0Y9P7 68 aa5.79□□□□□ -1.48
MMP28-206ENST00000616383 SERP2Q8N6R1 65 aa5.78□□□□□ -1.48
MMP28-206ENST00000616383 ANAPC13Q9BS18 74 aa5.76□□□□□ -1.49
MMP28-206ENST00000616383 MP68P56378 58 aa5.75□□□□□ -1.49
MMP28-206ENST00000616383 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
MMP28-206ENST00000616383 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
MMP28-206ENST00000616383 A0A0U1RQV1 116 aa5.73□□□□□ -1.49
MMP28-206ENST00000616383 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
MMP28-206ENST00000616383 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
MMP28-206ENST00000616383 COX7CP15954 63 aa5.72□□□□□ -1.49
MMP28-206ENST00000616383 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
MMP28-206ENST00000616383 C7orf65Q6ZTY9 151 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms