RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 K7EP34 96 aa5.3□□□□□ -1.56
PDLIM2-219ENST00000616289 GHRHP01286 108 aa5.3□□□□□ -1.56
PDLIM2-219ENST00000616289 MTURNQ8N3F0 131 aa5.3□□□□□ -1.56
PDLIM2-219ENST00000616289 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
PDLIM2-219ENST00000616289 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
PDLIM2-219ENST00000616289 TRBV7-4A0A0J9YYF1 115 aa5.29□□□□□ -1.56
PDLIM2-219ENST00000616289 J3QR89 54 aa5.29□□□□□ -1.56
PDLIM2-219ENST00000616289 TRIAP1O43715 76 aa5.29□□□□□ -1.56
PDLIM2-219ENST00000616289 DEFB116Q30KQ4 102 aa5.29□□□□□ -1.56
PDLIM2-219ENST00000616289 PRO1854Q9UHT4 67 aa5.29□□□□□ -1.56
PDLIM2-219ENST00000616289 C9orf118A6NHY6 69 aa5.28□□□□□ -1.56
PDLIM2-219ENST00000616289 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
PDLIM2-219ENST00000616289 CEND1Q8N111 149 aa5.28□□□□□ -1.56
PDLIM2-219ENST00000616289 FXYD2P54710 66 aa5.27□□□□□ -1.57
PDLIM2-219ENST00000616289 ANKRD29Q8N6D5 301 aa5.27□□□□□ -1.57
PDLIM2-219ENST00000616289 IGHV6-1A0A0B4J1U7 121 aa5.26□□□□□ -1.57
PDLIM2-219ENST00000616289 A6NJY4 79 aa5.26□□□□□ -1.57
PDLIM2-219ENST00000616289 LINC00472Q9H8W2 130 aa5.26□□□□□ -1.57
PDLIM2-219ENST00000616289 DNAL4O96015 105 aa5.25□□□□□ -1.57
PDLIM2-219ENST00000616289 ORMDL1Q9P0S3 153 aa5.25□□□□□ -1.57
PDLIM2-219ENST00000616289 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
PDLIM2-219ENST00000616289 TRACP01848 142 aa5.24□□□□□ -1.57
PDLIM2-219ENST00000616289 CCKP06307 115 aa5.24□□□□□ -1.57
PDLIM2-219ENST00000616289 SPCS1Q9Y6A9 102 aa5.24□□□□□ -1.57
PDLIM2-219ENST00000616289 A0A1W2PPM0 123 aa5.23□□□□□ -1.57
PDLIM2-219ENST00000616289 TMEM256-PLSCR3K7ERE1 68 aa5.22□□□□□ -1.57
PDLIM2-219ENST00000616289 A0A1B0GVX0 72 aa5.21□□□□□ -1.58
PDLIM2-219ENST00000616289 H3BQ85 93 aa5.21□□□□□ -1.58
PDLIM2-219ENST00000616289 K7ERJ3 54 aa5.21□□□□□ -1.58
PDLIM2-219ENST00000616289 C8orf87E5RJ46 101 aa5.2□□□□□ -1.58
PDLIM2-219ENST00000616289 F8W1H4 67 aa5.2□□□□□ -1.58
PDLIM2-219ENST00000616289 PSMB2P49721 201 aa5.2□□□□□ -1.58
PDLIM2-219ENST00000616289 ZCCHC13Q8WW36 166 aaKnown RBP5.19□□□□□ -1.58
PDLIM2-219ENST00000616289 SPINK7P58062 85 aa5.17□□□□□ -1.58
PDLIM2-219ENST00000616289 COX6CP09669 75 aa5.16□□□□□ -1.58
PDLIM2-219ENST00000616289 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
PDLIM2-219ENST00000616289 RBM3P98179 157 aaKnown RBP5.14□□□□□ -1.59
PDLIM2-219ENST00000616289 LYRM7Q5U5X0 104 aa5.14□□□□□ -1.59
PDLIM2-219ENST00000616289 DSCR8Q96T75 97 aa5.14□□□□□ -1.59
PDLIM2-219ENST00000616289 J3KT08 172 aa5.13□□□□□ -1.59
PDLIM2-219ENST00000616289 WFDC13Q8IUB5 93 aa5.13□□□□□ -1.59
PDLIM2-219ENST00000616289 Q8N9P0 234 aaPredicted RBP5.13□□□□□ -1.59
PDLIM2-219ENST00000616289 A8MWP4 228 aa5.12□□□□□ -1.59
PDLIM2-219ENST00000616289 NAA38Q9BRA0 125 aaKnown RBP5.11□□□□□ -1.59
PDLIM2-219ENST00000616289 LINC00846Q9NV44 126 aa5.11□□□□□ -1.59
PDLIM2-219ENST00000616289 Q6ZQT0 140 aa5.1□□□□□ -1.59
PDLIM2-219ENST00000616289 C9JAW5 83 aa5.09□□□□□ -1.59
PDLIM2-219ENST00000616289 C8orf17Q9NRJ1 99 aa5.09□□□□□ -1.59
PDLIM2-219ENST00000616289 NDUFB1O75438 58 aa5.08□□□□□ -1.6
PDLIM2-219ENST00000616289 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
PDLIM2-219ENST00000616289 ETDBQ3ZM63 59 aa5.08□□□□□ -1.6
PDLIM2-219ENST00000616289 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
PDLIM2-219ENST00000616289 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
PDLIM2-219ENST00000616289 IGKV3D-7A0A0C4DH55 119 aa5.06□□□□□ -1.6
PDLIM2-219ENST00000616289 BAALC-AS2P0C853 105 aa5.06□□□□□ -1.6
PDLIM2-219ENST00000616289 Q6ZVQ6 151 aa5.04□□□□□ -1.6
PDLIM2-219ENST00000616289 ATXN8Q156A1 80 aa5.03□□□□□ -1.6
PDLIM2-219ENST00000616289 LOC110117498A0A087WWA1 95 aa5.02□□□□□ -1.61
PDLIM2-219ENST00000616289 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
PDLIM2-219ENST00000616289 JMJD7-PLA2G4BH0Y9G9 81 aa5.01□□□□□ -1.61
PDLIM2-219ENST00000616289 PRR15Q8IV56 129 aa5.01□□□□□ -1.61
PDLIM2-219ENST00000616289 MMP24-AS1A0A0U1RRL7 71 aa5□□□□□ -1.61
PDLIM2-219ENST00000616289 A0A1B0GW54 56 aa5□□□□□ -1.61
PDLIM2-219ENST00000616289 SMCPP49901 116 aaPredicted RBP5□□□□□ -1.61
PDLIM2-219ENST00000616289 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
PDLIM2-219ENST00000616289 H1FX-AS1Q4G0G2 97 aa5□□□□□ -1.61
PDLIM2-219ENST00000616289 MRPL34Q9BQ48 92 aaKnown RBP4.99□□□□□ -1.61
PDLIM2-219ENST00000616289 H3BT86 120 aa4.98□□□□□ -1.61
PDLIM2-219ENST00000616289 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
PDLIM2-219ENST00000616289 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
PDLIM2-219ENST00000616289 PDE6GP18545 87 aa4.97□□□□□ -1.61
PDLIM2-219ENST00000616289 NREPQ16612 68 aa4.96□□□□□ -1.62
PDLIM2-219ENST00000616289 K7EQZ3 153 aa4.95□□□□□ -1.62
PDLIM2-219ENST00000616289 NDUFS5O43920 106 aa4.95□□□□□ -1.62
PDLIM2-219ENST00000616289 FAM240AA0A1B0GVK7 77 aa4.94□□□□□ -1.62
PDLIM2-219ENST00000616289 hDV103S1A0JD37 113 aa4.94□□□□□ -1.62
PDLIM2-219ENST00000616289 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
PDLIM2-219ENST00000616289 NEBP20929 6669 aa4.93□□□□□ -1.62
PDLIM2-219ENST00000616289 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
PDLIM2-219ENST00000616289 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
PDLIM2-219ENST00000616289 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
PDLIM2-219ENST00000616289 CCDC179H3BU77 68 aa4.92□□□□□ -1.62
PDLIM2-219ENST00000616289 C7orf65Q6ZTY9 151 aa4.92□□□□□ -1.62
PDLIM2-219ENST00000616289 IMUPQ9GZP8 106 aa4.92□□□□□ -1.62
PDLIM2-219ENST00000616289 Q5W150 140 aa4.91□□□□□ -1.62
PDLIM2-219ENST00000616289 ACYP1P07311 99 aa4.9□□□□□ -1.63
PDLIM2-219ENST00000616289 C5orf47Q569G3 176 aa4.9□□□□□ -1.63
PDLIM2-219ENST00000616289 C4orf26Q17RF5 130 aa4.87□□□□□ -1.63
PDLIM2-219ENST00000616289 BPY2O14599 106 aa4.86□□□□□ -1.63
PDLIM2-219ENST00000616289 UQCRQO14949 82 aa4.86□□□□□ -1.63
PDLIM2-219ENST00000616289 MT1BP07438 61 aa4.85□□□□□ -1.63
PDLIM2-219ENST00000616289 Q8N9L7 120 aa4.85□□□□□ -1.63
PDLIM2-219ENST00000616289 A6NN06 94 aa4.84□□□□□ -1.63
PDLIM2-219ENST00000616289 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
PDLIM2-219ENST00000616289 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
PDLIM2-219ENST00000616289 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
PDLIM2-219ENST00000616289 FAM236AA0A1B0GUQ0 79 aa4.83□□□□□ -1.64
PDLIM2-219ENST00000616289 FAM236BA0A1B0GV22 79 aa4.83□□□□□ -1.64
PDLIM2-219ENST00000616289 LINC00643Q86TS7 51 aa4.83□□□□□ -1.64
PDLIM2-219ENST00000616289 ATOX1O00244 68 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms