RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 RBM12B-AS1Q9P1G2 102 aa8.41□□□□□ -1.06
SSBP2-220ENST00000615665 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
SSBP2-220ENST00000615665 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
SSBP2-220ENST00000615665 PRAC1Q96KF2 57 aa8.41□□□□□ -1.06
SSBP2-220ENST00000615665 Q8N9P0 234 aaPredicted RBP8.41□□□□□ -1.06
SSBP2-220ENST00000615665 LCA10Q71F78 164 aa8.4□□□□□ -1.07
SSBP2-220ENST00000615665 ZCCHC13Q8WW36 166 aaKnown RBP8.39□□□□□ -1.07
SSBP2-220ENST00000615665 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
SSBP2-220ENST00000615665 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
SSBP2-220ENST00000615665 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
SSBP2-220ENST00000615665 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
SSBP2-220ENST00000615665 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
SSBP2-220ENST00000615665 PKD1L1Q8TDX9 2849 aa8.36□□□□□ -1.07
SSBP2-220ENST00000615665 LCE6AA0A183 80 aa8.36□□□□□ -1.07
SSBP2-220ENST00000615665 Q8N1X5 172 aa8.36□□□□□ -1.07
SSBP2-220ENST00000615665 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-220ENST00000615665 Q5VV11 94 aa8.35□□□□□ -1.07
SSBP2-220ENST00000615665 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
SSBP2-220ENST00000615665 TRRAPQ9Y4A5 3859 aa8.31□□□□□ -1.08
SSBP2-220ENST00000615665 SPINK7P58062 85 aa8.29□□□□□ -1.08
SSBP2-220ENST00000615665 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
SSBP2-220ENST00000615665 HRES1P13985 223 aa8.26□□□□□ -1.09
SSBP2-220ENST00000615665 TENM2Q9NT68 2774 aa8.26□□□□□ -1.09
SSBP2-220ENST00000615665 Q75L30 129 aa8.25□□□□□ -1.09
SSBP2-220ENST00000615665 A0A087X002 238 aa8.23□□□□□ -1.09
SSBP2-220ENST00000615665 A0A0D9SG42 100 aa8.23□□□□□ -1.09
SSBP2-220ENST00000615665 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
SSBP2-220ENST00000615665 A8MU10 97 aa8.23□□□□□ -1.09
SSBP2-220ENST00000615665 AKAP9Q99996 3911 aa8.23□□□□□ -1.09
SSBP2-220ENST00000615665 Q5W150 140 aa8.22□□□□□ -1.09
SSBP2-220ENST00000615665 CRIPTQ9P021 101 aa8.19□□□□□ -1.1
SSBP2-220ENST00000615665 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
SSBP2-220ENST00000615665 LINC01554Q52M75 96 aa8.16□□□□□ -1.1
SSBP2-220ENST00000615665 ASB16-AS1Q495Z4 193 aa8.15□□□□□ -1.1
SSBP2-220ENST00000615665 H3BS24 57 aa8.15□□□□□ -1.11
SSBP2-220ENST00000615665 CSAG1Q6PB30 78 aa8.12□□□□□ -1.11
SSBP2-220ENST00000615665 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
SSBP2-220ENST00000615665 TGP01266 2768 aa8.1□□□□□ -1.11
SSBP2-220ENST00000615665 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
SSBP2-220ENST00000615665 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
SSBP2-220ENST00000615665 A0A1B0GU33 70 aa8.02□□□□□ -1.13
SSBP2-220ENST00000615665 Q6ZSA8 131 aa8□□□□□ -1.13
SSBP2-220ENST00000615665 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
SSBP2-220ENST00000615665 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
SSBP2-220ENST00000615665 KRTAP21-3Q3LHN1 58 aa7.92□□□□□ -1.14
SSBP2-220ENST00000615665 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
SSBP2-220ENST00000615665 A6NN06 94 aa7.86□□□□□ -1.15
SSBP2-220ENST00000615665 Q5VSD8 79 aa7.86□□□□□ -1.15
SSBP2-220ENST00000615665 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
SSBP2-220ENST00000615665 SPATA8Q6RVD6 105 aa7.82□□□□□ -1.16
SSBP2-220ENST00000615665 FBN3Q75N90 2809 aa7.81□□□□□ -1.16
SSBP2-220ENST00000615665 COL7A1Q02388 2944 aa7.79□□□□□ -1.16
SSBP2-220ENST00000615665 CSMD3Q7Z407 3707 aa7.77□□□□□ -1.17
SSBP2-220ENST00000615665 J3QL48 77 aa7.75□□□□□ -1.17
SSBP2-220ENST00000615665 MEGF8Q7Z7M0 2845 aa7.75□□□□□ -1.17
SSBP2-220ENST00000615665 KRTAP16-1A8MUX0 517 aa7.74□□□□□ -1.17
SSBP2-220ENST00000615665 COX6B2Q6YFQ2 88 aa7.72□□□□□ -1.17
SSBP2-220ENST00000615665 KRTAP13-3Q3SY46 172 aa7.71□□□□□ -1.18
SSBP2-220ENST00000615665 A8MUU9 505 aa7.69□□□□□ -1.18
SSBP2-220ENST00000615665 C20orf166-AS1Q96NR2 134 aa7.68□□□□□ -1.18
SSBP2-220ENST00000615665 S4R3F8 94 aa7.67□□□□□ -1.18
SSBP2-220ENST00000615665 LUZP6Q538Z0 58 aa7.65□□□□□ -1.18
SSBP2-220ENST00000615665 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
SSBP2-220ENST00000615665 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
SSBP2-220ENST00000615665 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
SSBP2-220ENST00000615665 ROMO1P60602 79 aa7.6□□□□□ -1.19
SSBP2-220ENST00000615665 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
SSBP2-220ENST00000615665 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
SSBP2-220ENST00000615665 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
SSBP2-220ENST00000615665 R4GN34 69 aa7.5□□□□□ -1.21
SSBP2-220ENST00000615665 PLECQ15149 4684 aaKnown RBP7.48□□□□□ -1.21
SSBP2-220ENST00000615665 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
SSBP2-220ENST00000615665 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
SSBP2-220ENST00000615665 SEC61BP60468 96 aaKnown RBP7.45□□□□□ -1.22
SSBP2-220ENST00000615665 M0QZ58 72 aa7.42□□□□□ -1.22
SSBP2-220ENST00000615665 XP32Q5T750 250 aa7.41□□□□□ -1.22
SSBP2-220ENST00000615665 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.22
SSBP2-220ENST00000615665 ANK2Q01484 3957 aa7.39□□□□□ -1.23
SSBP2-220ENST00000615665 DNAH1Q9P2D7 4330 aa7.39□□□□□ -1.23
SSBP2-220ENST00000615665 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
SSBP2-220ENST00000615665 VPS13DQ5THJ4 4388 aa7.35□□□□□ -1.23
SSBP2-220ENST00000615665 CMYA5Q8N3K9 4069 aa7.35□□□□□ -1.23
SSBP2-220ENST00000615665 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
SSBP2-220ENST00000615665 A0A0A0MQY5 61 aa7.33□□□□□ -1.24
SSBP2-220ENST00000615665 H0YAA0 97 aa7.31□□□□□ -1.24
SSBP2-220ENST00000615665 STARD9Q9P2P6 4700 aa7.31□□□□□ -1.24
SSBP2-220ENST00000615665 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
SSBP2-220ENST00000615665 M0R2T5 61 aa7.23□□□□□ -1.25
SSBP2-220ENST00000615665 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
SSBP2-220ENST00000615665 ALMS1Q8TCU4 4167 aa7.21□□□□□ -1.25
SSBP2-220ENST00000615665 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.25
SSBP2-220ENST00000615665 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
SSBP2-220ENST00000615665 DNAH11Q96DT5 4516 aa7.21□□□□□ -1.26
SSBP2-220ENST00000615665 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
SSBP2-220ENST00000615665 LYSTQ99698 3801 aa7.14□□□□□ -1.27
SSBP2-220ENST00000615665 DYNC2H1Q8NCM8 4307 aaKnown RBP7.12□□□□□ -1.27
SSBP2-220ENST00000615665 DNAH8Q96JB1 4490 aa7.1□□□□□ -1.27
SSBP2-220ENST00000615665 DNHD1Q96M86 4753 aa7.09□□□□□ -1.27
SSBP2-220ENST00000615665 DNAH2Q9P225 4427 aa7.09□□□□□ -1.27
SSBP2-220ENST00000615665 KMT2AQ03164 3969 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms