RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SPINK7P58062 85 aa8.1□□□□□ -1.11
FOXN3-219ENST00000615335 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
FOXN3-219ENST00000615335 IGKV2-24A0A0C4DH68 120 aa8.09□□□□□ -1.11
FOXN3-219ENST00000615335 DEFB116Q30KQ4 102 aa8.09□□□□□ -1.11
FOXN3-219ENST00000615335 SPAG11AQ6PDA7 123 aa8.09□□□□□ -1.11
FOXN3-219ENST00000615335 REG3GQ6UW15 175 aa8.09□□□□□ -1.11
FOXN3-219ENST00000615335 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
FOXN3-219ENST00000615335 A0A096LNI7 61 aa8.08□□□□□ -1.12
FOXN3-219ENST00000615335 RYR3Q15413 4870 aa8.08□□□□□ -1.12
FOXN3-219ENST00000615335 PKD1P98161 4303 aa8.08□□□□□ -1.12
FOXN3-219ENST00000615335 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
FOXN3-219ENST00000615335 PRAC1Q96KF2 57 aa8.06□□□□□ -1.12
FOXN3-219ENST00000615335 CHTF8P0CG12 524 aa8.05□□□□□ -1.12
FOXN3-219ENST00000615335 DNAH5Q8TE73 4624 aa8.04□□□□□ -1.12
FOXN3-219ENST00000615335 PANO1I0J062 215 aa8.02□□□□□ -1.13
FOXN3-219ENST00000615335 PKHD1P08F94 4074 aa8.01□□□□□ -1.13
FOXN3-219ENST00000615335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.01□□□□□ -1.13
FOXN3-219ENST00000615335 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
FOXN3-219ENST00000615335 A0A1W2PNN7 141 aa8□□□□□ -1.13
FOXN3-219ENST00000615335 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
FOXN3-219ENST00000615335 PRLHP81277 87 aa7.99□□□□□ -1.13
FOXN3-219ENST00000615335 IGFL1Q6UW32 110 aa7.99□□□□□ -1.13
FOXN3-219ENST00000615335 KRTAP10-1P60331 282 aa7.98□□□□□ -1.13
FOXN3-219ENST00000615335 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
FOXN3-219ENST00000615335 A8MWP4 228 aa7.96□□□□□ -1.14
FOXN3-219ENST00000615335 IGLV8-61A0A075B6I0 122 aa7.95□□□□□ -1.14
FOXN3-219ENST00000615335 A0A087WSZ3 146 aa7.95□□□□□ -1.14
FOXN3-219ENST00000615335 RPL37AP61513 92 aaKnown RBP7.95□□□□□ -1.14
FOXN3-219ENST00000615335 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
FOXN3-219ENST00000615335 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
FOXN3-219ENST00000615335 HRES1P13985 223 aa7.93□□□□□ -1.14
FOXN3-219ENST00000615335 PCOTHQ58A44 107 aa7.93□□□□□ -1.14
FOXN3-219ENST00000615335 Q6ZSA8 131 aa7.92□□□□□ -1.14
FOXN3-219ENST00000615335 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
FOXN3-219ENST00000615335 LRP1BQ9NZR2 4599 aa7.91□□□□□ -1.14
FOXN3-219ENST00000615335 DNAH8Q96JB1 4490 aa7.9□□□□□ -1.14
FOXN3-219ENST00000615335 KRTAP11-1Q8IUC1 163 aa7.9□□□□□ -1.15
FOXN3-219ENST00000615335 RETNLBQ9BQ08 111 aa7.89□□□□□ -1.15
FOXN3-219ENST00000615335 H0Y9J4 135 aa7.88□□□□□ -1.15
FOXN3-219ENST00000615335 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
FOXN3-219ENST00000615335 SPRR1BP22528 89 aa7.88□□□□□ -1.15
FOXN3-219ENST00000615335 MMP24-AS1A0A0U1RRL7 71 aa7.87□□□□□ -1.15
FOXN3-219ENST00000615335 LINC00472Q9H8W2 130 aa7.86□□□□□ -1.15
FOXN3-219ENST00000615335 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
FOXN3-219ENST00000615335 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
FOXN3-219ENST00000615335 EPPK1P58107 5090 aaKnown RBP7.8□□□□□ -1.16
FOXN3-219ENST00000615335 CSAG1Q6PB30 78 aa7.79□□□□□ -1.16
FOXN3-219ENST00000615335 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
FOXN3-219ENST00000615335 SMR3BP02814 79 aaPredicted RBP7.77□□□□□ -1.17
FOXN3-219ENST00000615335 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
FOXN3-219ENST00000615335 ACYP2P14621 99 aa7.76□□□□□ -1.17
FOXN3-219ENST00000615335 A0A1B0GU69 56 aa7.75□□□□□ -1.17
FOXN3-219ENST00000615335 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
FOXN3-219ENST00000615335 SRRM2Q9UQ35 2752 aaKnown RBP7.74□□□□□ -1.17
FOXN3-219ENST00000615335 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
FOXN3-219ENST00000615335 UQCR11O14957 56 aa7.73□□□□□ -1.17
FOXN3-219ENST00000615335 CDK2AP2O75956 126 aa7.72□□□□□ -1.17
FOXN3-219ENST00000615335 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.17
FOXN3-219ENST00000615335 IGLV7-43P04211 117 aa7.71□□□□□ -1.17
FOXN3-219ENST00000615335 C8orf17Q9NRJ1 99 aa7.71□□□□□ -1.18
FOXN3-219ENST00000615335 ZNF706Q9Y5V0 76 aaPredicted RBP7.71□□□□□ -1.18
FOXN3-219ENST00000615335 ZNF861PO60384 105 aa7.7□□□□□ -1.18
FOXN3-219ENST00000615335 FAT1Q14517 4588 aa7.69□□□□□ -1.18
FOXN3-219ENST00000615335 LINC00483Q53H64 154 aa7.67□□□□□ -1.18
FOXN3-219ENST00000615335 HSPG2P98160 4391 aa7.67□□□□□ -1.18
FOXN3-219ENST00000615335 Q96NJ1 140 aa7.67□□□□□ -1.18
FOXN3-219ENST00000615335 KIAA1109Q2LD37 5005 aa7.66□□□□□ -1.18
FOXN3-219ENST00000615335 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
FOXN3-219ENST00000615335 MRPL34Q9BQ48 92 aaKnown RBP7.65□□□□□ -1.18
FOXN3-219ENST00000615335 RYR1P21817 5038 aa7.64□□□□□ -1.19
FOXN3-219ENST00000615335 ROMO1P60602 79 aa7.62□□□□□ -1.19
FOXN3-219ENST00000615335 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
FOXN3-219ENST00000615335 A0A1B0GVX0 72 aa7.61□□□□□ -1.19
FOXN3-219ENST00000615335 Q5VSD8 79 aa7.61□□□□□ -1.19
FOXN3-219ENST00000615335 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
FOXN3-219ENST00000615335 IGHV6-1A0A0B4J1U7 121 aa7.6□□□□□ -1.19
FOXN3-219ENST00000615335 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
FOXN3-219ENST00000615335 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
FOXN3-219ENST00000615335 Q8N1X5 172 aa7.57□□□□□ -1.2
FOXN3-219ENST00000615335 KRTAP17-1Q9BYP8 105 aa7.56□□□□□ -1.2
FOXN3-219ENST00000615335 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
FOXN3-219ENST00000615335 KRTAP13-3Q3SY46 172 aa7.53□□□□□ -1.2
FOXN3-219ENST00000615335 BIRC6Q9NR09 4857 aa7.53□□□□□ -1.2
FOXN3-219ENST00000615335 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
FOXN3-219ENST00000615335 NOTCH2NLQ7Z3S9 236 aa7.5□□□□□ -1.21
FOXN3-219ENST00000615335 Q5W150 140 aa7.48□□□□□ -1.21
FOXN3-219ENST00000615335 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
FOXN3-219ENST00000615335 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
FOXN3-219ENST00000615335 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
FOXN3-219ENST00000615335 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
FOXN3-219ENST00000615335 SSBP3-AS1Q7Z2R9 100 aa7.42□□□□□ -1.22
FOXN3-219ENST00000615335 A8MUU9 505 aa7.41□□□□□ -1.22
FOXN3-219ENST00000615335 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
FOXN3-219ENST00000615335 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.23
FOXN3-219ENST00000615335 HERC2O95714 4834 aa7.39□□□□□ -1.23
FOXN3-219ENST00000615335 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
FOXN3-219ENST00000615335 P0C880 135 aa7.35□□□□□ -1.23
FOXN3-219ENST00000615335 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
FOXN3-219ENST00000615335 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
FOXN3-219ENST00000615335 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms