RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 LAMA1P25391 3075 aa1.54□□□□□ -2.16
CBWD3-209ENST00000614377 KRTAP12-2P59991 146 aa1.54□□□□□ -2.16
CBWD3-209ENST00000614377 PP632Q6XCG6 107 aa1.54□□□□□ -2.16
CBWD3-209ENST00000614377 CACNA1HO95180 2353 aa1.54□□□□□ -2.16
CBWD3-209ENST00000614377 RYR3Q15413 4870 aa1.54□□□□□ -2.16
CBWD3-209ENST00000614377 CSMD1Q96PZ7 3565 aa1.54□□□□□ -2.16
CBWD3-209ENST00000614377 CACNA1EQ15878 2313 aa1.53□□□□□ -2.16
CBWD3-209ENST00000614377 AKAP13Q12802 2813 aa1.53□□□□□ -2.16
CBWD3-209ENST00000614377 LAMA3Q16787 3333 aa1.53□□□□□ -2.16
CBWD3-209ENST00000614377 PCNX1Q96RV3 2341 aa1.53□□□□□ -2.16
CBWD3-209ENST00000614377 LOC400499M0QZD8 3231 aa1.53□□□□□ -2.16
CBWD3-209ENST00000614377 ASPMQ8IZT6 3477 aa1.53□□□□□ -2.16
CBWD3-209ENST00000614377 VPS13DQ5THJ4 4388 aa1.53□□□□□ -2.16
CBWD3-209ENST00000614377 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.17
CBWD3-209ENST00000614377 VWFP04275 2813 aa1.52□□□□□ -2.17
CBWD3-209ENST00000614377 FREM2Q5SZK8 3169 aa1.52□□□□□ -2.17
CBWD3-209ENST00000614377 PTPRZ1P23471 2315 aaPredicted RBP1.52□□□□□ -2.17
CBWD3-209ENST00000614377 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
CBWD3-209ENST00000614377 COL12A1Q99715 3063 aa1.52□□□□□ -2.17
CBWD3-209ENST00000614377 HTN1P15515 57 aa1.52□□□□□ -2.17
CBWD3-209ENST00000614377 PCLOQ9Y6V0 5065 aa1.52□□□□□ -2.17
CBWD3-209ENST00000614377 CRYBG3Q68DQ2 2970 aa1.52□□□□□ -2.17
CBWD3-209ENST00000614377 DSPP15924 2871 aaKnown RBP1.51□□□□□ -2.17
CBWD3-209ENST00000614377 BSNQ9UPA5 3926 aa1.51□□□□□ -2.17
CBWD3-209ENST00000614377 SPRR5A0A1B0GTR4 108 aa1.51□□□□□ -2.17
CBWD3-209ENST00000614377 LRBAP50851 2863 aa1.51□□□□□ -2.17
CBWD3-209ENST00000614377 NOTCH3Q9UM47 2321 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 CEP250Q9BV73 2442 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 FRAS1Q86XX4 4008 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 CHD9Q3L8U1 2897 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 SPG11Q96JI7 2443 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 UBE2DNLQ8IWF7 75 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 NF1P21359 2839 aa1.5□□□□□ -2.17
CBWD3-209ENST00000614377 CELSR1Q9NYQ6 3014 aa1.49□□□□□ -2.17
CBWD3-209ENST00000614377 DMXL1Q9Y485 3027 aa1.49□□□□□ -2.17
CBWD3-209ENST00000614377 DEFB133Q30KQ1 61 aa1.49□□□□□ -2.17
CBWD3-209ENST00000614377 KRTAP13-2Q52LG2 175 aa1.49□□□□□ -2.17
CBWD3-209ENST00000614377 RIF1Q5UIP0 2472 aaKnown RBP1.49□□□□□ -2.17
CBWD3-209ENST00000614377 SPTBN2O15020 2390 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 H3BUX3 64 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 MAP1AP78559 2803 aaPredicted RBP1.48□□□□□ -2.17
CBWD3-209ENST00000614377 DNAH1Q9P2D7 4330 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 ANK2Q01484 3957 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 ATMQ13315 3056 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 KRTAP10-12P60413 245 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 NOP10Q9NPE3 64 aaKnown RBP1.48□□□□□ -2.17
CBWD3-209ENST00000614377 CSMD3Q7Z407 3707 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 ZFYVE26Q68DK2 2539 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 HECTD1Q9ULT8 2610 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 CFAP46Q8IYW2 2715 aa1.48□□□□□ -2.17
CBWD3-209ENST00000614377 ACACAQ13085 2346 aa1.47□□□□□ -2.17
CBWD3-209ENST00000614377 MYO15AQ9UKN7 3530 aa1.47□□□□□ -2.17
CBWD3-209ENST00000614377 DMXL2Q8TDJ6 3036 aa1.47□□□□□ -2.17
CBWD3-209ENST00000614377 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
CBWD3-209ENST00000614377 ABCA12Q86UK0 2595 aa1.47□□□□□ -2.17
CBWD3-209ENST00000614377 DEFB136Q30KP8 78 aa1.47□□□□□ -2.17
CBWD3-209ENST00000614377 U3KQA8 63 aa1.47□□□□□ -2.17
CBWD3-209ENST00000614377 BRD3OSQ6XYD6 125 aa1.46□□□□□ -2.18
CBWD3-209ENST00000614377 HERC2O95714 4834 aa1.46□□□□□ -2.18
CBWD3-209ENST00000614377 CDH23Q9H251 3354 aa1.46□□□□□ -2.18
CBWD3-209ENST00000614377 DNAH11Q96DT5 4516 aa1.46□□□□□ -2.18
CBWD3-209ENST00000614377 RP1L1Q8IWN7 2480 aaPredicted RBP1.45□□□□□ -2.18
CBWD3-209ENST00000614377 AKAP6Q13023 2319 aa1.45□□□□□ -2.18
CBWD3-209ENST00000614377 S4R3F8 94 aa1.45□□□□□ -2.18
CBWD3-209ENST00000614377 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
CBWD3-209ENST00000614377 LYSTQ99698 3801 aa1.45□□□□□ -2.18
CBWD3-209ENST00000614377 PRLHP81277 87 aa1.45□□□□□ -2.18
CBWD3-209ENST00000614377 KRTAP13-4Q3LI77 160 aa1.45□□□□□ -2.18
CBWD3-209ENST00000614377 ITPR3Q14573 2671 aa1.45□□□□□ -2.18
CBWD3-209ENST00000614377 FN1P02751 2386 aaKnown RBP1.45□□□□□ -2.18
CBWD3-209ENST00000614377 SPTA1P02549 2419 aa1.44□□□□□ -2.18
CBWD3-209ENST00000614377 PKDREJQ9NTG1 2253 aa1.44□□□□□ -2.18
CBWD3-209ENST00000614377 PRO0255Q9UI72 69 aa1.44□□□□□ -2.18
CBWD3-209ENST00000614377 NOTCH2Q04721 2471 aa1.44□□□□□ -2.18
CBWD3-209ENST00000614377 HIVEP3Q5T1R4 2406 aa1.43□□□□□ -2.18
CBWD3-209ENST00000614377 PDZD2O15018 2839 aa1.42□□□□□ -2.18
CBWD3-209ENST00000614377 TACC2O95359 2948 aa1.42□□□□□ -2.18
CBWD3-209ENST00000614377 DYNC2H1Q8NCM8 4307 aaKnown RBP1.42□□□□□ -2.18
CBWD3-209ENST00000614377 DNAH8Q96JB1 4490 aa1.42□□□□□ -2.18
CBWD3-209ENST00000614377 MEGF8Q7Z7M0 2845 aa1.42□□□□□ -2.18
CBWD3-209ENST00000614377 CREBBPQ92793 2442 aa1.42□□□□□ -2.18
CBWD3-209ENST00000614377 SPINK1P00995 79 aa1.42□□□□□ -2.18
CBWD3-209ENST00000614377 POLQO75417 2590 aa1.42□□□□□ -2.18
CBWD3-209ENST00000614377 SPTAN1Q13813 2472 aaKnown RBP1.42□□□□□ -2.18
CBWD3-209ENST00000614377 A0A1B0GVY2 172 aa1.41□□□□□ -2.18
CBWD3-209ENST00000614377 KRTAP13-1Q8IUC0 172 aa1.41□□□□□ -2.18
CBWD3-209ENST00000614377 PRRC2CQ9Y520 2896 aaKnown RBP1.41□□□□□ -2.18
CBWD3-209ENST00000614377 KRTAP1-4P0C5Y4 121 aa1.41□□□□□ -2.18
CBWD3-209ENST00000614377 DEFB124Q8NES8 71 aa1.41□□□□□ -2.18
CBWD3-209ENST00000614377 SRRM2Q9UQ35 2752 aaKnown RBP1.41□□□□□ -2.18
CBWD3-209ENST00000614377 F8P00451 2351 aa1.41□□□□□ -2.18
CBWD3-209ENST00000614377 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
CBWD3-209ENST00000614377 LCE1FQ5T754 118 aa1.41□□□□□ -2.18
CBWD3-209ENST00000614377 DEFB103AP81534 67 aa1.4□□□□□ -2.19
CBWD3-209ENST00000614377 TLN1Q9Y490 2541 aaKnown RBP1.4□□□□□ -2.19
CBWD3-209ENST00000614377 COL6A5A8TX70 2615 aa1.4□□□□□ -2.19
CBWD3-209ENST00000614377 EP300Q09472 2414 aaPredicted RBP1.39□□□□□ -2.19
CBWD3-209ENST00000614377 APC2O95996 2303 aa1.39□□□□□ -2.19
CBWD3-209ENST00000614377 HIVEP1P15822 2718 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms