RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 RTL8CO15255 209 aa7.7□□□□□ -1.18
PCDHGA4-202ENST00000612927 FRAS1Q86XX4 4008 aa7.7□□□□□ -1.18
PCDHGA4-202ENST00000612927 TGP01266 2768 aa7.69□□□□□ -1.18
PCDHGA4-202ENST00000612927 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
PCDHGA4-202ENST00000612927 LY6G6CO95867 125 aa7.68□□□□□ -1.18
PCDHGA4-202ENST00000612927 SPRR1BP22528 89 aa7.68□□□□□ -1.18
PCDHGA4-202ENST00000612927 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
PCDHGA4-202ENST00000612927 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
PCDHGA4-202ENST00000612927 TP53AIP1Q9HCN2 124 aa7.67□□□□□ -1.18
PCDHGA4-202ENST00000612927 DNAH8Q96JB1 4490 aa7.66□□□□□ -1.18
PCDHGA4-202ENST00000612927 MOBPQ13875 183 aa7.65□□□□□ -1.18
PCDHGA4-202ENST00000612927 DNAH6Q9C0G6 4158 aa7.64□□□□□ -1.19
PCDHGA4-202ENST00000612927 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
PCDHGA4-202ENST00000612927 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
PCDHGA4-202ENST00000612927 ASB16-AS1Q495Z4 193 aa7.63□□□□□ -1.19
PCDHGA4-202ENST00000612927 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
PCDHGA4-202ENST00000612927 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
PCDHGA4-202ENST00000612927 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
PCDHGA4-202ENST00000612927 IGLV9-49A0A0B4J1Y8 123 aa7.62□□□□□ -1.19
PCDHGA4-202ENST00000612927 WWC2-AS2Q96NR7 200 aa7.6□□□□□ -1.19
PCDHGA4-202ENST00000612927 LINC00313P59037 77 aa7.6□□□□□ -1.19
PCDHGA4-202ENST00000612927 ALMS1Q8TCU4 4167 aa7.6□□□□□ -1.19
PCDHGA4-202ENST00000612927 PSORS1C2Q9UIG4 136 aa7.59□□□□□ -1.19
PCDHGA4-202ENST00000612927 SPINK7P58062 85 aa7.57□□□□□ -1.2
PCDHGA4-202ENST00000612927 PRAC1Q96KF2 57 aa7.57□□□□□ -1.2
PCDHGA4-202ENST00000612927 HRES1P13985 223 aa7.57□□□□□ -1.2
PCDHGA4-202ENST00000612927 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
PCDHGA4-202ENST00000612927 DNAH11Q96DT5 4516 aa7.56□□□□□ -1.2
PCDHGA4-202ENST00000612927 KRTAP10-2P60368 255 aa7.55□□□□□ -1.2
PCDHGA4-202ENST00000612927 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
PCDHGA4-202ENST00000612927 C8orf17Q9NRJ1 99 aa7.55□□□□□ -1.2
PCDHGA4-202ENST00000612927 Q96NJ1 140 aa7.54□□□□□ -1.2
PCDHGA4-202ENST00000612927 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
PCDHGA4-202ENST00000612927 HYDINQ4G0P3 5121 aa7.51□□□□□ -1.21
PCDHGA4-202ENST00000612927 ZNF861PO60384 105 aa7.51□□□□□ -1.21
PCDHGA4-202ENST00000612927 ZNF706Q9Y5V0 76 aaPredicted RBP7.5□□□□□ -1.21
PCDHGA4-202ENST00000612927 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
PCDHGA4-202ENST00000612927 CIRBP-AS1Q8TBR5 109 aa7.48□□□□□ -1.21
PCDHGA4-202ENST00000612927 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
PCDHGA4-202ENST00000612927 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
PCDHGA4-202ENST00000612927 MRPL34Q9BQ48 92 aaKnown RBP7.48□□□□□ -1.21
PCDHGA4-202ENST00000612927 IGLV7-43P04211 117 aa7.47□□□□□ -1.21
PCDHGA4-202ENST00000612927 PKD1P98161 4303 aa7.46□□□□□ -1.21
PCDHGA4-202ENST00000612927 PLA2G1BP04054 148 aaKnown RBP7.45□□□□□ -1.22
PCDHGA4-202ENST00000612927 KRTAP10-1P60331 282 aa7.45□□□□□ -1.22
PCDHGA4-202ENST00000612927 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
PCDHGA4-202ENST00000612927 CDK2AP2O75956 126 aa7.44□□□□□ -1.22
PCDHGA4-202ENST00000612927 Q6ZSA8 131 aa7.43□□□□□ -1.22
PCDHGA4-202ENST00000612927 LRP1BQ9NZR2 4599 aa7.42□□□□□ -1.22
PCDHGA4-202ENST00000612927 A0A087X002 238 aa7.42□□□□□ -1.22
PCDHGA4-202ENST00000612927 ACYP2P14621 99 aa7.41□□□□□ -1.22
PCDHGA4-202ENST00000612927 KRTAP13-3Q3SY46 172 aa7.37□□□□□ -1.23
PCDHGA4-202ENST00000612927 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
PCDHGA4-202ENST00000612927 RETNLBQ9BQ08 111 aa7.37□□□□□ -1.23
PCDHGA4-202ENST00000612927 SACSQ9NZJ4 4579 aa7.37□□□□□ -1.23
PCDHGA4-202ENST00000612927 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
PCDHGA4-202ENST00000612927 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
PCDHGA4-202ENST00000612927 DMAC1Q96GE9 116 aa7.34□□□□□ -1.23
PCDHGA4-202ENST00000612927 VPS13BQ7Z7G8 4022 aa7.33□□□□□ -1.24
PCDHGA4-202ENST00000612927 A0A1B0GU69 56 aa7.33□□□□□ -1.24
PCDHGA4-202ENST00000612927 Q5W150 140 aa7.33□□□□□ -1.24
PCDHGA4-202ENST00000612927 PKHD1P08F94 4074 aa7.3□□□□□ -1.24
PCDHGA4-202ENST00000612927 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
PCDHGA4-202ENST00000612927 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
PCDHGA4-202ENST00000612927 UQCR11O14957 56 aa7.26□□□□□ -1.25
PCDHGA4-202ENST00000612927 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
PCDHGA4-202ENST00000612927 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
PCDHGA4-202ENST00000612927 CSAG1Q6PB30 78 aa7.25□□□□□ -1.25
PCDHGA4-202ENST00000612927 DYNC1H1Q14204 4646 aaKnown RBP7.22□□□□□ -1.25
PCDHGA4-202ENST00000612927 FAM229AH3BQW9 127 aa7.22□□□□□ -1.25
PCDHGA4-202ENST00000612927 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
PCDHGA4-202ENST00000612927 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
PCDHGA4-202ENST00000612927 RYR2Q92736 4967 aa7.17□□□□□ -1.26
PCDHGA4-202ENST00000612927 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
PCDHGA4-202ENST00000612927 SMR3BP02814 79 aaPredicted RBP7.16□□□□□ -1.26
PCDHGA4-202ENST00000612927 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
PCDHGA4-202ENST00000612927 ROMO1P60602 79 aa7.13□□□□□ -1.27
PCDHGA4-202ENST00000612927 TYMSOSQ8TAI1 123 aa7.13□□□□□ -1.27
PCDHGA4-202ENST00000612927 FAT1Q14517 4588 aa7.12□□□□□ -1.27
PCDHGA4-202ENST00000612927 KMT2CQ8NEZ4 4911 aaKnown RBP7.1□□□□□ -1.27
PCDHGA4-202ENST00000612927 KRTAP16-1A8MUX0 517 aa7.08□□□□□ -1.28
PCDHGA4-202ENST00000612927 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
PCDHGA4-202ENST00000612927 SPINK1P00995 79 aa7.05□□□□□ -1.28
PCDHGA4-202ENST00000612927 IGKV2D-30A0A075B6S6 120 aa7.04□□□□□ -1.28
PCDHGA4-202ENST00000612927 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
PCDHGA4-202ENST00000612927 PKHD1L1Q86WI1 4243 aa6.99□□□□□ -1.29
PCDHGA4-202ENST00000612927 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
PCDHGA4-202ENST00000612927 A8MUU9 505 aa6.96□□□□□ -1.3
PCDHGA4-202ENST00000612927 P0C880 135 aa6.95□□□□□ -1.3
PCDHGA4-202ENST00000612927 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
PCDHGA4-202ENST00000612927 RYR3Q15413 4870 aa6.92□□□□□ -1.3
PCDHGA4-202ENST00000612927 H0YAA0 97 aa6.91□□□□□ -1.3
PCDHGA4-202ENST00000612927 C9orf92A6NGG3 77 aa6.89□□□□□ -1.31
PCDHGA4-202ENST00000612927 HSPG2P98160 4391 aa6.89□□□□□ -1.31
PCDHGA4-202ENST00000612927 Q8N1X5 172 aa6.85□□□□□ -1.31
PCDHGA4-202ENST00000612927 Q5VSD8 79 aa6.84□□□□□ -1.31
PCDHGA4-202ENST00000612927 LRP1Q07954 4544 aaKnown RBP6.84□□□□□ -1.31
PCDHGA4-202ENST00000612927 A0A1B0GU33 70 aa6.82□□□□□ -1.32
PCDHGA4-202ENST00000612927 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
PCDHGA4-202ENST00000612927 RYR1P21817 5038 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms