RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
CCL3L3-201ENST00000612839 H3BQ85 93 aa6.3□□□□□ -1.4
CCL3L3-201ENST00000612839 TRBV7-7A0A0K0K1E9 115 aa6.29□□□□□ -1.4
CCL3L3-201ENST00000612839 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
CCL3L3-201ENST00000612839 J3QR89 54 aa6.28□□□□□ -1.4
CCL3L3-201ENST00000612839 A0A1B0GV72 72 aa6.27□□□□□ -1.41
CCL3L3-201ENST00000612839 JMJD7-PLA2G4BH0Y9G9 81 aa6.27□□□□□ -1.41
CCL3L3-201ENST00000612839 C14orf132Q9NPU4 83 aa6.27□□□□□ -1.41
CCL3L3-201ENST00000612839 Q6Q795 121 aa6.26□□□□□ -1.41
CCL3L3-201ENST00000612839 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
CCL3L3-201ENST00000612839 MUC2Q02817 5179 aa6.24□□□□□ -1.41
CCL3L3-201ENST00000612839 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
CCL3L3-201ENST00000612839 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
CCL3L3-201ENST00000612839 TRBV7-4A0A0J9YYF1 115 aa6.22□□□□□ -1.41
CCL3L3-201ENST00000612839 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
CCL3L3-201ENST00000612839 LOC110117498A0A087WWA1 95 aa6.22□□□□□ -1.41
CCL3L3-201ENST00000612839 Q6ZQT0 140 aa6.22□□□□□ -1.41
CCL3L3-201ENST00000612839 A0A087WSZ3 146 aa6.21□□□□□ -1.42
CCL3L3-201ENST00000612839 FAM240AA0A1B0GVK7 77 aa6.21□□□□□ -1.42
CCL3L3-201ENST00000612839 C9orf92A6NGG3 77 aa6.21□□□□□ -1.42
CCL3L3-201ENST00000612839 CCKP06307 115 aa6.21□□□□□ -1.42
CCL3L3-201ENST00000612839 DSCR8Q96T75 97 aa6.2□□□□□ -1.42
CCL3L3-201ENST00000612839 SS18L2Q9UHA2 77 aa6.2□□□□□ -1.42
CCL3L3-201ENST00000612839 ACYP1P07311 99 aa6.18□□□□□ -1.42
CCL3L3-201ENST00000612839 PDE6GP18545 87 aa6.18□□□□□ -1.42
CCL3L3-201ENST00000612839 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
CCL3L3-201ENST00000612839 Q96NJ1 140 aa6.16□□□□□ -1.42
CCL3L3-201ENST00000612839 LINC00846Q9NV44 126 aa6.15□□□□□ -1.43
CCL3L3-201ENST00000612839 SEC61BP60468 96 aaKnown RBP6.14□□□□□ -1.43
CCL3L3-201ENST00000612839 C21orf62-AS1Q17RA5 79 aa6.12□□□□□ -1.43
CCL3L3-201ENST00000612839 MT-ATP8P03928 68 aa6.1□□□□□ -1.43
CCL3L3-201ENST00000612839 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
CCL3L3-201ENST00000612839 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.43
CCL3L3-201ENST00000612839 RPL37P61927 97 aaKnown RBP6.09□□□□□ -1.44
CCL3L3-201ENST00000612839 LINC00643Q86TS7 51 aa6.09□□□□□ -1.44
CCL3L3-201ENST00000612839 SIGMAR1Q99720 223 aa6.09□□□□□ -1.44
CCL3L3-201ENST00000612839 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
CCL3L3-201ENST00000612839 DEFB116Q30KQ4 102 aa6.08□□□□□ -1.44
CCL3L3-201ENST00000612839 PCOTHQ58A44 107 aa6.08□□□□□ -1.44
CCL3L3-201ENST00000612839 A0A1B0GW54 56 aa6.07□□□□□ -1.44
CCL3L3-201ENST00000612839 Q6ZVQ6 151 aa6.07□□□□□ -1.44
CCL3L3-201ENST00000612839 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
CCL3L3-201ENST00000612839 A0A0U1RQV1 116 aa6.03□□□□□ -1.44
CCL3L3-201ENST00000612839 DSCR10P59022 87 aa6.03□□□□□ -1.44
CCL3L3-201ENST00000612839 Q75L30 129 aa6.03□□□□□ -1.44
CCL3L3-201ENST00000612839 IGKV3D-7A0A0C4DH55 119 aa6.02□□□□□ -1.44
CCL3L3-201ENST00000612839 NREPQ16612 68 aa6.02□□□□□ -1.45
CCL3L3-201ENST00000612839 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
CCL3L3-201ENST00000612839 LINC00313P59037 77 aa6.01□□□□□ -1.45
CCL3L3-201ENST00000612839 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
CCL3L3-201ENST00000612839 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
CCL3L3-201ENST00000612839 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
CCL3L3-201ENST00000612839 J3KT08 172 aa6□□□□□ -1.45
CCL3L3-201ENST00000612839 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
CCL3L3-201ENST00000612839 A8MUU9 505 aa5.99□□□□□ -1.45
CCL3L3-201ENST00000612839 KRTAP16-1A8MUX0 517 aa5.99□□□□□ -1.45
CCL3L3-201ENST00000612839 A0A1B0GVX0 72 aa5.98□□□□□ -1.45
CCL3L3-201ENST00000612839 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
CCL3L3-201ENST00000612839 CXCL6P80162 114 aa5.97□□□□□ -1.45
CCL3L3-201ENST00000612839 ATP11AUNQ6ZP68 121 aa5.97□□□□□ -1.45
CCL3L3-201ENST00000612839 BPY2O14599 106 aa5.96□□□□□ -1.46
CCL3L3-201ENST00000612839 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
CCL3L3-201ENST00000612839 SCGB1A1P11684 91 aa5.95□□□□□ -1.46
CCL3L3-201ENST00000612839 A0A087WVE0 104 aa5.94□□□□□ -1.46
CCL3L3-201ENST00000612839 A8MWP4 228 aa5.94□□□□□ -1.46
CCL3L3-201ENST00000612839 KRTAP19-2Q3LHN2 52 aa5.94□□□□□ -1.46
CCL3L3-201ENST00000612839 NDUFB1O75438 58 aa5.93□□□□□ -1.46
CCL3L3-201ENST00000612839 HIST1H4AP62805 103 aaKnown RBP5.93□□□□□ -1.46
CCL3L3-201ENST00000612839 Q8N9L7 120 aa5.92□□□□□ -1.46
CCL3L3-201ENST00000612839 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.47
CCL3L3-201ENST00000612839 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.47
CCL3L3-201ENST00000612839 PRR15Q8IV56 129 aa5.9□□□□□ -1.47
CCL3L3-201ENST00000612839 C8orf17Q9NRJ1 99 aa5.9□□□□□ -1.47
CCL3L3-201ENST00000612839 K7EQZ3 153 aa5.89□□□□□ -1.47
CCL3L3-201ENST00000612839 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
CCL3L3-201ENST00000612839 MMP24-AS1A0A0U1RRL7 71 aa5.85□□□□□ -1.47
CCL3L3-201ENST00000612839 PCP4P48539 62 aa5.83□□□□□ -1.48
CCL3L3-201ENST00000612839 MT1HP80294 61 aa5.82□□□□□ -1.48
CCL3L3-201ENST00000612839 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
CCL3L3-201ENST00000612839 TMEM254Q8TBM7 123 aa5.81□□□□□ -1.48
CCL3L3-201ENST00000612839 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
CCL3L3-201ENST00000612839 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
CCL3L3-201ENST00000612839 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
CCL3L3-201ENST00000612839 ATOX1O00244 68 aa5.8□□□□□ -1.48
CCL3L3-201ENST00000612839 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
CCL3L3-201ENST00000612839 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
CCL3L3-201ENST00000612839 WFDC13Q8IUB5 93 aa5.77□□□□□ -1.49
CCL3L3-201ENST00000612839 HRES1P13985 223 aa5.76□□□□□ -1.49
CCL3L3-201ENST00000612839 CASC2Q6XLA1 102 aa5.76□□□□□ -1.49
CCL3L3-201ENST00000612839 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
CCL3L3-201ENST00000612839 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
CCL3L3-201ENST00000612839 NDUFS5O43920 106 aa5.74□□□□□ -1.49
CCL3L3-201ENST00000612839 SPINK7P58062 85 aa5.74□□□□□ -1.49
CCL3L3-201ENST00000612839 SERP2Q8N6R1 65 aa5.74□□□□□ -1.49
CCL3L3-201ENST00000612839 MPLKIPQ8TAP9 179 aa5.74□□□□□ -1.49
CCL3L3-201ENST00000612839 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
CCL3L3-201ENST00000612839 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
CCL3L3-201ENST00000612839 COX7CP15954 63 aa5.72□□□□□ -1.49
CCL3L3-201ENST00000612839 SMIM20Q8N5G0 67 aa5.72□□□□□ -1.49
CCL3L3-201ENST00000612839 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms