RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 FP248Q71RG6 208 aaPredicted RBP7.29□□□□□ -1.24
TP53-219ENST00000610538 EPPK1P58107 5090 aaKnown RBP7.29□□□□□ -1.24
TP53-219ENST00000610538 V9GYY9 64 aa7.28□□□□□ -1.24
TP53-219ENST00000610538 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
TP53-219ENST00000610538 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
TP53-219ENST00000610538 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
TP53-219ENST00000610538 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
TP53-219ENST00000610538 PRO0628Q9UI54 55 aa7.24□□□□□ -1.25
TP53-219ENST00000610538 HSPG2P98160 4391 aa7.24□□□□□ -1.25
TP53-219ENST00000610538 DSCR10P59022 87 aa7.24□□□□□ -1.25
TP53-219ENST00000610538 K7EQZ3 153 aa7.23□□□□□ -1.25
TP53-219ENST00000610538 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
TP53-219ENST00000610538 SPINK6Q6UWN8 80 aa7.21□□□□□ -1.26
TP53-219ENST00000610538 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
TP53-219ENST00000610538 LINC00472Q9H8W2 130 aa7.2□□□□□ -1.26
TP53-219ENST00000610538 FAM229BQ4G0N7 80 aa7.19□□□□□ -1.26
TP53-219ENST00000610538 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
TP53-219ENST00000610538 RYR1P21817 5038 aa7.18□□□□□ -1.26
TP53-219ENST00000610538 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
TP53-219ENST00000610538 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
TP53-219ENST00000610538 TYMSOSQ8TAI1 123 aa7.17□□□□□ -1.26
TP53-219ENST00000610538 MPLKIPQ8TAP9 179 aa7.17□□□□□ -1.26
TP53-219ENST00000610538 Q96NJ1 140 aa7.16□□□□□ -1.26
TP53-219ENST00000610538 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
TP53-219ENST00000610538 HCG22E2RYF7 251 aa7.14□□□□□ -1.27
TP53-219ENST00000610538 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
TP53-219ENST00000610538 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
TP53-219ENST00000610538 ZCCHC13Q8WW36 166 aaKnown RBP7.14□□□□□ -1.27
TP53-219ENST00000610538 hDV103S1A0JD37 113 aa7.13□□□□□ -1.27
TP53-219ENST00000610538 Q5VSD8 79 aa7.13□□□□□ -1.27
TP53-219ENST00000610538 MYCBP2O75592 4640 aa7.12□□□□□ -1.27
TP53-219ENST00000610538 A8MWP4 228 aa7.12□□□□□ -1.27
TP53-219ENST00000610538 CDK2AP2O75956 126 aa7.11□□□□□ -1.27
TP53-219ENST00000610538 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
TP53-219ENST00000610538 PKHD1L1Q86WI1 4243 aa7.1□□□□□ -1.27
TP53-219ENST00000610538 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
TP53-219ENST00000610538 CD164Q04900 197 aa7.1□□□□□ -1.27
TP53-219ENST00000610538 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
TP53-219ENST00000610538 NDUFB1O75438 58 aa7.08□□□□□ -1.28
TP53-219ENST00000610538 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
TP53-219ENST00000610538 MP68P56378 58 aa7.07□□□□□ -1.28
TP53-219ENST00000610538 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
TP53-219ENST00000610538 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
TP53-219ENST00000610538 LINC00304Q8N9R0 145 aa7.06□□□□□ -1.28
TP53-219ENST00000610538 Q1T7F1 81 aa7.05□□□□□ -1.28
TP53-219ENST00000610538 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
TP53-219ENST00000610538 CASC2Q6XLA1 102 aa7.05□□□□□ -1.28
TP53-219ENST00000610538 A0A1B0GVX0 72 aa7.03□□□□□ -1.28
TP53-219ENST00000610538 SPINK1P00995 79 aa7.03□□□□□ -1.28
TP53-219ENST00000610538 MMP24-AS1A0A0U1RRL7 71 aa7.02□□□□□ -1.29
TP53-219ENST00000610538 PRR4Q16378 134 aa7.02□□□□□ -1.29
TP53-219ENST00000610538 TRAV22A0A0B4J277 110 aa7.02□□□□□ -1.29
TP53-219ENST00000610538 KRTAP29-1A8MX34 341 aaPredicted RBP7.01□□□□□ -1.29
TP53-219ENST00000610538 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
TP53-219ENST00000610538 C8orf17Q9NRJ1 99 aa7.01□□□□□ -1.29
TP53-219ENST00000610538 H3BPC8 53 aa7□□□□□ -1.29
TP53-219ENST00000610538 LIMD2Q9BT23 127 aa7□□□□□ -1.29
TP53-219ENST00000610538 TNXBP22105 4242 aa6.99□□□□□ -1.29
TP53-219ENST00000610538 H0Y9P7 68 aa6.99□□□□□ -1.29
TP53-219ENST00000610538 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
TP53-219ENST00000610538 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
TP53-219ENST00000610538 Q8N1X5 172 aa6.98□□□□□ -1.29
TP53-219ENST00000610538 NDUFS5O43920 106 aa6.97□□□□□ -1.29
TP53-219ENST00000610538 SPANXA2-OT1Q8N9U9 137 aa6.97□□□□□ -1.29
TP53-219ENST00000610538 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.3
TP53-219ENST00000610538 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
TP53-219ENST00000610538 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
TP53-219ENST00000610538 PSPHP1O15172 72 aa6.95□□□□□ -1.3
TP53-219ENST00000610538 LINC00313P59037 77 aa6.93□□□□□ -1.3
TP53-219ENST00000610538 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
TP53-219ENST00000610538 KRTAP10-8P60410 259 aa6.91□□□□□ -1.3
TP53-219ENST00000610538 A8MUN3 132 aa6.89□□□□□ -1.31
TP53-219ENST00000610538 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
TP53-219ENST00000610538 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
TP53-219ENST00000610538 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
TP53-219ENST00000610538 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
TP53-219ENST00000610538 Q5VV11 94 aa6.85□□□□□ -1.31
TP53-219ENST00000610538 Q8N9P0 234 aaPredicted RBP6.85□□□□□ -1.31
TP53-219ENST00000610538 TP53AIP1Q9HCN2 124 aa6.85□□□□□ -1.31
TP53-219ENST00000610538 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
TP53-219ENST00000610538 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
TP53-219ENST00000610538 Q5W150 140 aa6.84□□□□□ -1.31
TP53-219ENST00000610538 HERC2O95714 4834 aa6.83□□□□□ -1.32
TP53-219ENST00000610538 KRTAP16-1A8MUX0 517 aa6.82□□□□□ -1.32
TP53-219ENST00000610538 COA5Q86WW8 74 aa6.82□□□□□ -1.32
TP53-219ENST00000610538 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
TP53-219ENST00000610538 PRR15LQ9BU68 103 aa6.82□□□□□ -1.32
TP53-219ENST00000610538 BIRC6Q9NR09 4857 aa6.82□□□□□ -1.32
TP53-219ENST00000610538 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
TP53-219ENST00000610538 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
TP53-219ENST00000610538 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
TP53-219ENST00000610538 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
TP53-219ENST00000610538 A6NED7 52 aa6.73□□□□□ -1.33
TP53-219ENST00000610538 A8MU10 97 aa6.73□□□□□ -1.33
TP53-219ENST00000610538 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
TP53-219ENST00000610538 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
TP53-219ENST00000610538 PCLOQ9Y6V0 5065 aa6.7□□□□□ -1.34
TP53-219ENST00000610538 LPAP08519 4548 aa6.7□□□□□ -1.34
TP53-219ENST00000610538 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
TP53-219ENST00000610538 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms