RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 MRPL34Q9BQ48 92 aaKnown RBP7.51□□□□□ -1.21
MSH6-212ENST00000607272 PLAC8Q9NZF1 115 aa7.51□□□□□ -1.21
MSH6-212ENST00000607272 ZNF706Q9Y5V0 76 aaPredicted RBP7.51□□□□□ -1.21
MSH6-212ENST00000607272 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
MSH6-212ENST00000607272 KTN1-AS1Q86SY8 53 aa7.51□□□□□ -1.21
MSH6-212ENST00000607272 CSMD3Q7Z407 3707 aa7.51□□□□□ -1.21
MSH6-212ENST00000607272 SPACA4Q8TDM5 124 aa7.49□□□□□ -1.21
MSH6-212ENST00000607272 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
MSH6-212ENST00000607272 HRES1P13985 223 aa7.48□□□□□ -1.21
MSH6-212ENST00000607272 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
MSH6-212ENST00000607272 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
MSH6-212ENST00000607272 A6NN06 94 aa7.45□□□□□ -1.22
MSH6-212ENST00000607272 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
MSH6-212ENST00000607272 MGAM2Q2M2H8 2515 aa7.44□□□□□ -1.22
MSH6-212ENST00000607272 DNAH7Q8WXX0 4024 aa7.43□□□□□ -1.22
MSH6-212ENST00000607272 DYNC2H1Q8NCM8 4307 aaKnown RBP7.42□□□□□ -1.22
MSH6-212ENST00000607272 A0A087X002 238 aa7.42□□□□□ -1.22
MSH6-212ENST00000607272 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
MSH6-212ENST00000607272 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
MSH6-212ENST00000607272 PSORS1C2Q9UIG4 136 aa7.41□□□□□ -1.22
MSH6-212ENST00000607272 ZNF861PO60384 105 aa7.4□□□□□ -1.22
MSH6-212ENST00000607272 SPINK7P58062 85 aa7.39□□□□□ -1.23
MSH6-212ENST00000607272 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
MSH6-212ENST00000607272 KRTAP13-3Q3SY46 172 aa7.37□□□□□ -1.23
MSH6-212ENST00000607272 NUPR2A6NF83 97 aa7.37□□□□□ -1.23
MSH6-212ENST00000607272 ACYP2P14621 99 aa7.36□□□□□ -1.23
MSH6-212ENST00000607272 Q5W150 140 aa7.36□□□□□ -1.23
MSH6-212ENST00000607272 RBM12B-AS1Q9P1G2 102 aa7.36□□□□□ -1.23
MSH6-212ENST00000607272 A0A087WTM6 91 aa7.36□□□□□ -1.23
MSH6-212ENST00000607272 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
MSH6-212ENST00000607272 PRR26Q8N8Z3 221 aa7.35□□□□□ -1.23
MSH6-212ENST00000607272 SPINK6Q6UWN8 80 aa7.35□□□□□ -1.23
MSH6-212ENST00000607272 PLECQ15149 4684 aaKnown RBP7.34□□□□□ -1.23
MSH6-212ENST00000607272 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.23
MSH6-212ENST00000607272 RTL8CO15255 209 aa7.33□□□□□ -1.24
MSH6-212ENST00000607272 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
MSH6-212ENST00000607272 FRAS1Q86XX4 4008 aa7.31□□□□□ -1.24
MSH6-212ENST00000607272 CIRBP-AS1Q8TBR5 109 aa7.29□□□□□ -1.24
MSH6-212ENST00000607272 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
MSH6-212ENST00000607272 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
MSH6-212ENST00000607272 IGLV7-43P04211 117 aa7.27□□□□□ -1.25
MSH6-212ENST00000607272 ALMS1Q8TCU4 4167 aa7.26□□□□□ -1.25
MSH6-212ENST00000607272 DNAH8Q96JB1 4490 aa7.26□□□□□ -1.25
MSH6-212ENST00000607272 LINC00313P59037 77 aa7.25□□□□□ -1.25
MSH6-212ENST00000607272 VPS13DQ5THJ4 4388 aa7.22□□□□□ -1.25
MSH6-212ENST00000607272 A0A1B0GU69 56 aa7.22□□□□□ -1.25
MSH6-212ENST00000607272 IGKV2-30P06310 120 aa7.2□□□□□ -1.26
MSH6-212ENST00000607272 STARD9Q9P2P6 4700 aa7.18□□□□□ -1.26
MSH6-212ENST00000607272 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
MSH6-212ENST00000607272 DNAH17Q9UFH2 4485 aa7.16□□□□□ -1.26
MSH6-212ENST00000607272 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
MSH6-212ENST00000607272 PRKDCP78527 4128 aaKnown RBP7.15□□□□□ -1.26
MSH6-212ENST00000607272 KMT2AQ03164 3969 aa7.15□□□□□ -1.27
MSH6-212ENST00000607272 C1orf134Q5TEV5 83 aa7.15□□□□□ -1.27
MSH6-212ENST00000607272 UQCR11O14957 56 aa7.13□□□□□ -1.27
MSH6-212ENST00000607272 MEGF8Q7Z7M0 2845 aa7.12□□□□□ -1.27
MSH6-212ENST00000607272 KRTAP16-1A8MUX0 517 aa7.12□□□□□ -1.27
MSH6-212ENST00000607272 DNAH2Q9P225 4427 aa7.12□□□□□ -1.27
MSH6-212ENST00000607272 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
MSH6-212ENST00000607272 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
MSH6-212ENST00000607272 TGP01266 2768 aa7.1□□□□□ -1.27
MSH6-212ENST00000607272 FBN3Q75N90 2809 aa7.09□□□□□ -1.27
MSH6-212ENST00000607272 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
MSH6-212ENST00000607272 PRAC1Q96KF2 57 aa7.08□□□□□ -1.28
MSH6-212ENST00000607272 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
MSH6-212ENST00000607272 ADM2Q7Z4H4 148 aa7.04□□□□□ -1.28
MSH6-212ENST00000607272 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
MSH6-212ENST00000607272 DNAH6Q9C0G6 4158 aa7.01□□□□□ -1.29
MSH6-212ENST00000607272 KRTAP10-2P60368 255 aa7□□□□□ -1.29
MSH6-212ENST00000607272 LINC01554Q52M75 96 aa6.99□□□□□ -1.29
MSH6-212ENST00000607272 LY6G6CO95867 125 aa6.98□□□□□ -1.29
MSH6-212ENST00000607272 KRTAP1-4P0C5Y4 121 aa6.98□□□□□ -1.29
MSH6-212ENST00000607272 Q6ZSA8 131 aa6.98□□□□□ -1.29
MSH6-212ENST00000607272 DNAH5Q8TE73 4624 aa6.96□□□□□ -1.29
MSH6-212ENST00000607272 SPINK1P00995 79 aa6.95□□□□□ -1.3
MSH6-212ENST00000607272 KRTAP10-1P60331 282 aa6.92□□□□□ -1.3
MSH6-212ENST00000607272 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
MSH6-212ENST00000607272 Q8N1X5 172 aa6.91□□□□□ -1.3
MSH6-212ENST00000607272 LRP1BQ9NZR2 4599 aa6.9□□□□□ -1.31
MSH6-212ENST00000607272 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
MSH6-212ENST00000607272 VPS13BQ7Z7G8 4022 aa6.88□□□□□ -1.31
MSH6-212ENST00000607272 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
MSH6-212ENST00000607272 PKD1P98161 4303 aa6.82□□□□□ -1.32
MSH6-212ENST00000607272 LINC00304Q8N9R0 145 aa6.82□□□□□ -1.32
MSH6-212ENST00000607272 H0YAA0 97 aa6.8□□□□□ -1.32
MSH6-212ENST00000607272 A8MUU9 505 aa6.79□□□□□ -1.32
MSH6-212ENST00000607272 A0A1B0GU33 70 aa6.78□□□□□ -1.32
MSH6-212ENST00000607272 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
MSH6-212ENST00000607272 FAT2Q9NYQ8 4349 aa6.75□□□□□ -1.33
MSH6-212ENST00000607272 H1FX-AS1Q4G0G2 97 aa6.73□□□□□ -1.33
MSH6-212ENST00000607272 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
MSH6-212ENST00000607272 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
MSH6-212ENST00000607272 HYDINQ4G0P3 5121 aa6.67□□□□□ -1.34
MSH6-212ENST00000607272 K7ERS5 55 aa6.65□□□□□ -1.34
MSH6-212ENST00000607272 SACSQ9NZJ4 4579 aa6.65□□□□□ -1.35
MSH6-212ENST00000607272 COX6B2Q6YFQ2 88 aa6.62□□□□□ -1.35
MSH6-212ENST00000607272 DNHD1Q96M86 4753 aa6.61□□□□□ -1.35
MSH6-212ENST00000607272 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
MSH6-212ENST00000607272 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
MSH6-212ENST00000607272 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms