RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 NOTCH2NLQ7Z3S9 236 aa10.97□□□□□ -0.65
TMEM248-207ENST00000607045 JMJD7-PLA2G4BH0Y9G9 81 aa10.96□□□□□ -0.65
TMEM248-207ENST00000607045 LINC00472Q9H8W2 130 aa10.96□□□□□ -0.65
TMEM248-207ENST00000607045 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
TMEM248-207ENST00000607045 MT2AP02795 61 aa10.95□□□□□ -0.66
TMEM248-207ENST00000607045 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
TMEM248-207ENST00000607045 IGHV6-1A0A0B4J1U7 121 aa10.94□□□□□ -0.66
TMEM248-207ENST00000607045 J3KT08 172 aa10.94□□□□□ -0.66
TMEM248-207ENST00000607045 KRTAP9-7A8MTY7 169 aa10.93□□□□□ -0.66
TMEM248-207ENST00000607045 FAM236DA0A1B0GTK5 79 aa10.91□□□□□ -0.66
TMEM248-207ENST00000607045 C8orf87E5RJ46 101 aa10.91□□□□□ -0.66
TMEM248-207ENST00000607045 FAM236CP0DP71 79 aa10.91□□□□□ -0.66
TMEM248-207ENST00000607045 FCGBPQ9Y6R7 5405 aaPredicted RBP10.9□□□□□ -0.66
TMEM248-207ENST00000607045 PDE6GP18545 87 aa10.9□□□□□ -0.66
TMEM248-207ENST00000607045 A0A1B0GW54 56 aa10.89□□□□□ -0.67
TMEM248-207ENST00000607045 HRES1P13985 223 aa10.89□□□□□ -0.67
TMEM248-207ENST00000607045 MPLKIPQ8TAP9 179 aa10.89□□□□□ -0.67
TMEM248-207ENST00000607045 NDUFB1O75438 58 aa10.88□□□□□ -0.67
TMEM248-207ENST00000607045 NAA38Q9BRA0 125 aaKnown RBP10.88□□□□□ -0.67
TMEM248-207ENST00000607045 MT1FP04733 61 aa10.87□□□□□ -0.67
TMEM248-207ENST00000607045 A0A1B0GVX0 72 aa10.86□□□□□ -0.67
TMEM248-207ENST00000607045 LCE2BO14633 110 aa10.85□□□□□ -0.67
TMEM248-207ENST00000607045 BATFQ16520 125 aa10.85□□□□□ -0.67
TMEM248-207ENST00000607045 Q6ZQT0 140 aa10.85□□□□□ -0.67
TMEM248-207ENST00000607045 RBM12B-AS1Q9P1G2 102 aa10.83□□□□□ -0.68
TMEM248-207ENST00000607045 LOC110117498A0A087WWA1 95 aa10.82□□□□□ -0.68
TMEM248-207ENST00000607045 KRTAP9-3Q9BYQ3 159 aa10.82□□□□□ -0.68
TMEM248-207ENST00000607045 KRTAP10-10P60014 251 aa10.8□□□□□ -0.68
TMEM248-207ENST00000607045 KRTAP19-1Q8IUB9 90 aa10.77□□□□□ -0.69
TMEM248-207ENST00000607045 C14orf132Q9NPU4 83 aa10.76□□□□□ -0.69
TMEM248-207ENST00000607045 A8MWP4 228 aa10.72□□□□□ -0.69
TMEM248-207ENST00000607045 NREPQ16612 68 aa10.71□□□□□ -0.69
TMEM248-207ENST00000607045 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
TMEM248-207ENST00000607045 C9orf118A6NHY6 69 aa10.7□□□□□ -0.7
TMEM248-207ENST00000607045 H3BT86 120 aa10.69□□□□□ -0.7
TMEM248-207ENST00000607045 ZCCHC13Q8WW36 166 aaKnown RBP10.68□□□□□ -0.7
TMEM248-207ENST00000607045 C8orf17Q9NRJ1 99 aa10.66□□□□□ -0.7
TMEM248-207ENST00000607045 A0A1W2PPM0 123 aa10.65□□□□□ -0.7
TMEM248-207ENST00000607045 SPINK7P58062 85 aa10.64□□□□□ -0.71
TMEM248-207ENST00000607045 LOC105371267A0A1B0GV96 52 aa10.62□□□□□ -0.71
TMEM248-207ENST00000607045 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
TMEM248-207ENST00000607045 IGKV3D-7A0A0C4DH55 119 aa10.61□□□□□ -0.71
TMEM248-207ENST00000607045 TAX1BP3O14907 124 aa10.6□□□□□ -0.71
TMEM248-207ENST00000607045 Q6ZVQ6 151 aa10.59□□□□□ -0.71
TMEM248-207ENST00000607045 PRR15Q8IV56 129 aa10.59□□□□□ -0.71
TMEM248-207ENST00000607045 MACF1Q9UPN3 7388 aaKnown RBP10.58□□□□□ -0.72
TMEM248-207ENST00000607045 SYNE2Q8WXH0 6885 aaKnown RBP10.56□□□□□ -0.72
TMEM248-207ENST00000607045 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
TMEM248-207ENST00000607045 TMEM254Q8TBM7 123 aa10.52□□□□□ -0.73
TMEM248-207ENST00000607045 BPY2O14599 106 aa10.51□□□□□ -0.73
TMEM248-207ENST00000607045 MRPL34Q9BQ48 92 aaKnown RBP10.51□□□□□ -0.73
TMEM248-207ENST00000607045 hDV103S1A0JD37 113 aa10.49□□□□□ -0.73
TMEM248-207ENST00000607045 NDUFS5O43920 106 aa10.49□□□□□ -0.73
TMEM248-207ENST00000607045 COL5A1-AS1Q5SY13 56 aa10.47□□□□□ -0.73
TMEM248-207ENST00000607045 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
TMEM248-207ENST00000607045 MMP24-AS1A0A0U1RRL7 71 aa10.46□□□□□ -0.73
TMEM248-207ENST00000607045 KRTAP19-6Q3LI70 58 aa10.46□□□□□ -0.73
TMEM248-207ENST00000607045 K7EQZ3 153 aa10.45□□□□□ -0.74
TMEM248-207ENST00000607045 LINC00846Q9NV44 126 aa10.39□□□□□ -0.75
TMEM248-207ENST00000607045 UBL5Q9BZL1 73 aa10.38□□□□□ -0.75
TMEM248-207ENST00000607045 CASC2Q6XLA1 102 aa10.35□□□□□ -0.75
TMEM248-207ENST00000607045 K7EP34 96 aa10.33□□□□□ -0.76
TMEM248-207ENST00000607045 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
TMEM248-207ENST00000607045 KRTAP3-2Q9BYR7 98 aa10.33□□□□□ -0.76
TMEM248-207ENST00000607045 SMCPP49901 116 aaPredicted RBP10.31□□□□□ -0.76
TMEM248-207ENST00000607045 GTF2H5Q6ZYL4 71 aa10.31□□□□□ -0.76
TMEM248-207ENST00000607045 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
TMEM248-207ENST00000607045 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
TMEM248-207ENST00000607045 Q8N9L7 120 aa10.28□□□□□ -0.76
TMEM248-207ENST00000607045 IGKV2D-30A0A075B6S6 120 aa10.27□□□□□ -0.77
TMEM248-207ENST00000607045 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
TMEM248-207ENST00000607045 HCG22E2RYF7 251 aa10.26□□□□□ -0.77
TMEM248-207ENST00000607045 CXCL6P80162 114 aa10.25□□□□□ -0.77
TMEM248-207ENST00000607045 PRO0461Q9UI25 63 aa10.25□□□□□ -0.77
TMEM248-207ENST00000607045 F8W1H4 67 aa10.2□□□□□ -0.78
TMEM248-207ENST00000607045 Q5W150 140 aa10.18□□□□□ -0.78
TMEM248-207ENST00000607045 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
TMEM248-207ENST00000607045 KRTAP6-3Q3LI67 103 aa10.15□□□□□ -0.78
TMEM248-207ENST00000607045 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
TMEM248-207ENST00000607045 TP53AIP1Q9HCN2 124 aa10.09□□□□□ -0.79
TMEM248-207ENST00000607045 C4orf26Q17RF5 130 aa10.05□□□□□ -0.8
TMEM248-207ENST00000607045 ACYP1P07311 99 aa9.99□□□□□ -0.81
TMEM248-207ENST00000607045 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
TMEM248-207ENST00000607045 KRTAP3-1Q9BYR8 98 aa9.93□□□□□ -0.82
TMEM248-207ENST00000607045 NEBP20929 6669 aa9.92□□□□□ -0.82
TMEM248-207ENST00000607045 C1orf64Q8NEQ6 169 aa9.91□□□□□ -0.82
TMEM248-207ENST00000607045 ATP5EP2Q5VTU8 51 aa9.9□□□□□ -0.82
TMEM248-207ENST00000607045 MT1BP07438 61 aa9.89□□□□□ -0.83
TMEM248-207ENST00000607045 S4R3F8 94 aa9.89□□□□□ -0.83
TMEM248-207ENST00000607045 FAM236AA0A1B0GUQ0 79 aa9.88□□□□□ -0.83
TMEM248-207ENST00000607045 FAM236BA0A1B0GV22 79 aa9.88□□□□□ -0.83
TMEM248-207ENST00000607045 FAM240AA0A1B0GVK7 77 aa9.88□□□□□ -0.83
TMEM248-207ENST00000607045 MUC12Q9UKN1 5478 aa9.87□□□□□ -0.83
TMEM248-207ENST00000607045 A6NN06 94 aa9.86□□□□□ -0.83
TMEM248-207ENST00000607045 HIST1H4AP62805 103 aaKnown RBP9.84□□□□□ -0.83
TMEM248-207ENST00000607045 CSAG1Q6PB30 78 aa9.84□□□□□ -0.83
TMEM248-207ENST00000607045 TRAV22A0A0B4J277 110 aa9.83□□□□□ -0.84
TMEM248-207ENST00000607045 LOC101927531A0A1B0GV80 90 aa9.8□□□□□ -0.84
TMEM248-207ENST00000607045 KRTAP19-8Q3LI54 63 aa9.8□□□□□ -0.84
TMEM248-207ENST00000607045 Q5VV11 94 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms