RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 A0A1B0GV90 55 aa11.35□□□□□ -0.59
GRAMD1A-214ENST00000603907 DEFB116Q30KQ4 102 aa11.34□□□□□ -0.59
GRAMD1A-214ENST00000603907 MUC17Q685J3 4493 aa11.32□□□□□ -0.6
GRAMD1A-214ENST00000603907 SEC61BP60468 96 aaKnown RBP11.31□□□□□ -0.6
GRAMD1A-214ENST00000603907 NDUFB1O75438 58 aa11.27□□□□□ -0.61
GRAMD1A-214ENST00000603907 A0A1B0GVX0 72 aa11.26□□□□□ -0.61
GRAMD1A-214ENST00000603907 LINC00313P59037 77 aa11.26□□□□□ -0.61
GRAMD1A-214ENST00000603907 C8orf87E5RJ46 101 aa11.25□□□□□ -0.61
GRAMD1A-214ENST00000603907 A8MWP4 228 aa11.24□□□□□ -0.61
GRAMD1A-214ENST00000603907 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
GRAMD1A-214ENST00000603907 IGHV6-1A0A0B4J1U7 121 aa11.23□□□□□ -0.61
GRAMD1A-214ENST00000603907 DSCR10P59022 87 aa11.23□□□□□ -0.61
GRAMD1A-214ENST00000603907 RPL37P61927 97 aaKnown RBP11.23□□□□□ -0.61
GRAMD1A-214ENST00000603907 Q6ZVQ6 151 aa11.23□□□□□ -0.61
GRAMD1A-214ENST00000603907 UBL5Q9BZL1 73 aa11.22□□□□□ -0.61
GRAMD1A-214ENST00000603907 Q75L30 129 aa11.21□□□□□ -0.61
GRAMD1A-214ENST00000603907 LINC00846Q9NV44 126 aa11.21□□□□□ -0.61
GRAMD1A-214ENST00000603907 BPY2O14599 106 aa11.19□□□□□ -0.62
GRAMD1A-214ENST00000603907 C20orf166-AS1Q96NR2 134 aa11.19□□□□□ -0.62
GRAMD1A-214ENST00000603907 CRCT1Q9UGL9 99 aa11.18□□□□□ -0.62
GRAMD1A-214ENST00000603907 IGKV3D-7A0A0C4DH55 119 aa11.17□□□□□ -0.62
GRAMD1A-214ENST00000603907 A8MUU9 505 aa11.16□□□□□ -0.62
GRAMD1A-214ENST00000603907 ACYP1P07311 99 aa11.16□□□□□ -0.62
GRAMD1A-214ENST00000603907 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
GRAMD1A-214ENST00000603907 KRTAP16-1A8MUX0 517 aa11.15□□□□□ -0.62
GRAMD1A-214ENST00000603907 NOTCH2NLQ7Z3S9 236 aa11.15□□□□□ -0.62
GRAMD1A-214ENST00000603907 FAM240AA0A1B0GVK7 77 aa11.13□□□□□ -0.63
GRAMD1A-214ENST00000603907 PCOTHQ58A44 107 aa11.13□□□□□ -0.63
GRAMD1A-214ENST00000603907 C8orf17Q9NRJ1 99 aa11.12□□□□□ -0.63
GRAMD1A-214ENST00000603907 ATP11AUNQ6ZP68 121 aa11.1□□□□□ -0.63
GRAMD1A-214ENST00000603907 K7EQZ3 153 aa11.08□□□□□ -0.64
GRAMD1A-214ENST00000603907 KRTAP4-1Q9BYQ7 146 aa11.05□□□□□ -0.64
GRAMD1A-214ENST00000603907 FSIP2Q5CZC0 6907 aa11.03□□□□□ -0.64
GRAMD1A-214ENST00000603907 CXCL6P80162 114 aa11.03□□□□□ -0.64
GRAMD1A-214ENST00000603907 MMP24-AS1A0A0U1RRL7 71 aa11.02□□□□□ -0.65
GRAMD1A-214ENST00000603907 Q8N9P0 234 aaPredicted RBP11.02□□□□□ -0.65
GRAMD1A-214ENST00000603907 TMEM254Q8TBM7 123 aa11.01□□□□□ -0.65
GRAMD1A-214ENST00000603907 J3QR89 54 aa11□□□□□ -0.65
GRAMD1A-214ENST00000603907 hDV103S1A0JD37 113 aa10.98□□□□□ -0.65
GRAMD1A-214ENST00000603907 Q8N9L7 120 aa10.98□□□□□ -0.65
GRAMD1A-214ENST00000603907 MRPL34Q9BQ48 92 aaKnown RBP10.97□□□□□ -0.65
GRAMD1A-214ENST00000603907 ATP5EP2Q5VTU8 51 aa10.95□□□□□ -0.66
GRAMD1A-214ENST00000603907 CASC2Q6XLA1 102 aa10.91□□□□□ -0.66
GRAMD1A-214ENST00000603907 HCG22E2RYF7 251 aa10.89□□□□□ -0.67
GRAMD1A-214ENST00000603907 LINC00643Q86TS7 51 aa10.89□□□□□ -0.67
GRAMD1A-214ENST00000603907 ZCCHC13Q8WW36 166 aaKnown RBP10.89□□□□□ -0.67
GRAMD1A-214ENST00000603907 WFDC13Q8IUB5 93 aa10.88□□□□□ -0.67
GRAMD1A-214ENST00000603907 LCE2CQ5TA81 110 aa10.87□□□□□ -0.67
GRAMD1A-214ENST00000603907 NDUFS5O43920 106 aa10.83□□□□□ -0.68
GRAMD1A-214ENST00000603907 MT1HP80294 61 aa10.8□□□□□ -0.68
GRAMD1A-214ENST00000603907 K7ERU9 68 aa10.78□□□□□ -0.68
GRAMD1A-214ENST00000603907 KRTAP19-2Q3LHN2 52 aa10.77□□□□□ -0.69
GRAMD1A-214ENST00000603907 HIST1H4AP62805 103 aaKnown RBP10.74□□□□□ -0.69
GRAMD1A-214ENST00000603907 TP53AIP1Q9HCN2 124 aa10.71□□□□□ -0.69
GRAMD1A-214ENST00000603907 LORP23490 312 aaPredicted RBP10.7□□□□□ -0.7
GRAMD1A-214ENST00000603907 SPINK7P58062 85 aa10.69□□□□□ -0.7
GRAMD1A-214ENST00000603907 KRTAP10-6P60371 365 aaPredicted RBP10.69□□□□□ -0.7
GRAMD1A-214ENST00000603907 Q5W150 140 aa10.66□□□□□ -0.7
GRAMD1A-214ENST00000603907 M0R2T5 61 aa10.64□□□□□ -0.71
GRAMD1A-214ENST00000603907 COX6B2Q6YFQ2 88 aa10.64□□□□□ -0.71
GRAMD1A-214ENST00000603907 HRES1P13985 223 aa10.63□□□□□ -0.71
GRAMD1A-214ENST00000603907 A0A087WVE0 104 aa10.61□□□□□ -0.71
GRAMD1A-214ENST00000603907 MPLKIPQ8TAP9 179 aa10.6□□□□□ -0.71
GRAMD1A-214ENST00000603907 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
GRAMD1A-214ENST00000603907 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
GRAMD1A-214ENST00000603907 IMUPQ9GZP8 106 aa10.56□□□□□ -0.72
GRAMD1A-214ENST00000603907 IGKV2D-30A0A075B6S6 120 aa10.54□□□□□ -0.72
GRAMD1A-214ENST00000603907 IGKV2-30P06310 120 aa10.54□□□□□ -0.72
GRAMD1A-214ENST00000603907 FAM236DA0A1B0GTK5 79 aa10.51□□□□□ -0.73
GRAMD1A-214ENST00000603907 UQCRQO14949 82 aa10.51□□□□□ -0.73
GRAMD1A-214ENST00000603907 FAM236CP0DP71 79 aa10.51□□□□□ -0.73
GRAMD1A-214ENST00000603907 TRAV22A0A0B4J277 110 aa10.49□□□□□ -0.73
GRAMD1A-214ENST00000603907 FLGP20930 4061 aaPredicted RBP10.48□□□□□ -0.73
GRAMD1A-214ENST00000603907 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
GRAMD1A-214ENST00000603907 KRTAP9-7A8MTY7 169 aa10.47□□□□□ -0.73
GRAMD1A-214ENST00000603907 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.42□□□□□ -0.74
GRAMD1A-214ENST00000603907 ATOX1O00244 68 aa10.42□□□□□ -0.74
GRAMD1A-214ENST00000603907 OCR1Q9BZK8 76 aa10.42□□□□□ -0.74
GRAMD1A-214ENST00000603907 LOC101927531A0A1B0GV80 90 aa10.4□□□□□ -0.74
GRAMD1A-214ENST00000603907 SCGB1A1P11684 91 aa10.4□□□□□ -0.74
GRAMD1A-214ENST00000603907 H0Y9P7 68 aa10.38□□□□□ -0.75
GRAMD1A-214ENST00000603907 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
GRAMD1A-214ENST00000603907 C5orf47Q569G3 176 aa10.33□□□□□ -0.76
GRAMD1A-214ENST00000603907 MP68P56378 58 aa10.32□□□□□ -0.76
GRAMD1A-214ENST00000603907 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
GRAMD1A-214ENST00000603907 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
GRAMD1A-214ENST00000603907 C4orf26Q17RF5 130 aa10.3□□□□□ -0.76
GRAMD1A-214ENST00000603907 SMIM20Q8N5G0 67 aa10.29□□□□□ -0.76
GRAMD1A-214ENST00000603907 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
GRAMD1A-214ENST00000603907 H3BPC8 53 aa10.27□□□□□ -0.77
GRAMD1A-214ENST00000603907 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
GRAMD1A-214ENST00000603907 LINC00208Q96KT6 92 aa10.25□□□□□ -0.77
GRAMD1A-214ENST00000603907 TRAV7A0A075B6U4 112 aa10.2□□□□□ -0.78
GRAMD1A-214ENST00000603907 KRTAP3-1Q9BYR8 98 aa10.15□□□□□ -0.78
GRAMD1A-214ENST00000603907 SSPOA2VEC9 5147 aa10.13□□□□□ -0.79
GRAMD1A-214ENST00000603907 USH2AO75445 5202 aa10.12□□□□□ -0.79
GRAMD1A-214ENST00000603907 KRTAP9-8Q9BYQ0 159 aa10.12□□□□□ -0.79
GRAMD1A-214ENST00000603907 KLKP1Q107X0 134 aa10.09□□□□□ -0.79
GRAMD1A-214ENST00000603907 A8MUN3 132 aa10.04□□□□□ -0.8
GRAMD1A-214ENST00000603907 SERP2Q8N6R1 65 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms