RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 C9orf92A6NGG3 77 aa10.42□□□□□ -0.74
PPFIA3-210ENST00000602800 A0A087WSZ3 146 aa10.4□□□□□ -0.74
PPFIA3-210ENST00000602800 A0A1B0GW54 56 aa10.4□□□□□ -0.74
PPFIA3-210ENST00000602800 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
PPFIA3-210ENST00000602800 KRTAP10-6P60371 365 aaPredicted RBP10.38□□□□□ -0.75
PPFIA3-210ENST00000602800 ETDBQ3ZM63 59 aa10.38□□□□□ -0.75
PPFIA3-210ENST00000602800 M0R2T5 61 aa10.36□□□□□ -0.75
PPFIA3-210ENST00000602800 J3QR89 54 aa10.31□□□□□ -0.76
PPFIA3-210ENST00000602800 C1orf195Q5TG92 126 aa10.31□□□□□ -0.76
PPFIA3-210ENST00000602800 COX6B2Q6YFQ2 88 aa10.3□□□□□ -0.76
PPFIA3-210ENST00000602800 K7ERU9 68 aa10.27□□□□□ -0.77
PPFIA3-210ENST00000602800 NREPQ16612 68 aa10.24□□□□□ -0.77
PPFIA3-210ENST00000602800 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
PPFIA3-210ENST00000602800 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
PPFIA3-210ENST00000602800 Q96NJ1 140 aa10.21□□□□□ -0.77
PPFIA3-210ENST00000602800 J3KT08 172 aa10.2□□□□□ -0.78
PPFIA3-210ENST00000602800 FLGP20930 4061 aaPredicted RBP10.19□□□□□ -0.78
PPFIA3-210ENST00000602800 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
PPFIA3-210ENST00000602800 SIGMAR1Q99720 223 aa10.18□□□□□ -0.78
PPFIA3-210ENST00000602800 ACYP1P07311 99 aa10.17□□□□□ -0.78
PPFIA3-210ENST00000602800 DEFB116Q30KQ4 102 aa10.17□□□□□ -0.78
PPFIA3-210ENST00000602800 UBL5Q9BZL1 73 aa10.17□□□□□ -0.78
PPFIA3-210ENST00000602800 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
PPFIA3-210ENST00000602800 Q6ZVQ6 151 aa10.14□□□□□ -0.79
PPFIA3-210ENST00000602800 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
PPFIA3-210ENST00000602800 NDUFB1O75438 58 aa10.11□□□□□ -0.79
PPFIA3-210ENST00000602800 BPY2O14599 106 aa10.09□□□□□ -0.79
PPFIA3-210ENST00000602800 A8MWP4 228 aa10.06□□□□□ -0.8
PPFIA3-210ENST00000602800 IGHV6-1A0A0B4J1U7 121 aa10.04□□□□□ -0.8
PPFIA3-210ENST00000602800 A0A1B0GVX0 72 aa10.04□□□□□ -0.8
PPFIA3-210ENST00000602800 KRTAP9-7A8MTY7 169 aa10.02□□□□□ -0.81
PPFIA3-210ENST00000602800 C8orf87E5RJ46 101 aa10.02□□□□□ -0.81
PPFIA3-210ENST00000602800 LINC00313P59037 77 aa10.02□□□□□ -0.81
PPFIA3-210ENST00000602800 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.01□□□□□ -0.81
PPFIA3-210ENST00000602800 DSCR10P59022 87 aa10.01□□□□□ -0.81
PPFIA3-210ENST00000602800 IGKV3D-7A0A0C4DH55 119 aa10□□□□□ -0.81
PPFIA3-210ENST00000602800 ATP11AUNQ6ZP68 121 aa10□□□□□ -0.81
PPFIA3-210ENST00000602800 PRR15Q8IV56 129 aa10□□□□□ -0.81
PPFIA3-210ENST00000602800 CXCL6P80162 114 aa9.97□□□□□ -0.81
PPFIA3-210ENST00000602800 K7EQZ3 153 aa9.95□□□□□ -0.82
PPFIA3-210ENST00000602800 ATP5EP2Q5VTU8 51 aa9.95□□□□□ -0.82
PPFIA3-210ENST00000602800 Q75L30 129 aa9.94□□□□□ -0.82
PPFIA3-210ENST00000602800 LINC00643Q86TS7 51 aa9.94□□□□□ -0.82
PPFIA3-210ENST00000602800 C8orf17Q9NRJ1 99 aa9.94□□□□□ -0.82
PPFIA3-210ENST00000602800 USH2AO75445 5202 aa9.93□□□□□ -0.82
PPFIA3-210ENST00000602800 SSPOA2VEC9 5147 aa9.93□□□□□ -0.82
PPFIA3-210ENST00000602800 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
PPFIA3-210ENST00000602800 Q8N9L7 120 aa9.9□□□□□ -0.82
PPFIA3-210ENST00000602800 C20orf166-AS1Q96NR2 134 aa9.87□□□□□ -0.83
PPFIA3-210ENST00000602800 KRTAP9-8Q9BYQ0 159 aa9.87□□□□□ -0.83
PPFIA3-210ENST00000602800 MMP24-AS1A0A0U1RRL7 71 aa9.86□□□□□ -0.83
PPFIA3-210ENST00000602800 KRTAP16-1A8MUX0 517 aa9.86□□□□□ -0.83
PPFIA3-210ENST00000602800 TMEM254Q8TBM7 123 aa9.85□□□□□ -0.83
PPFIA3-210ENST00000602800 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
PPFIA3-210ENST00000602800 A8MUU9 505 aa9.84□□□□□ -0.83
PPFIA3-210ENST00000602800 CASC2Q6XLA1 102 aa9.82□□□□□ -0.84
PPFIA3-210ENST00000602800 HCG22E2RYF7 251 aa9.81□□□□□ -0.84
PPFIA3-210ENST00000602800 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
PPFIA3-210ENST00000602800 WFDC13Q8IUB5 93 aa9.81□□□□□ -0.84
PPFIA3-210ENST00000602800 MRPL34Q9BQ48 92 aaKnown RBP9.81□□□□□ -0.84
PPFIA3-210ENST00000602800 Q8N9P0 234 aaPredicted RBP9.78□□□□□ -0.84
PPFIA3-210ENST00000602800 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
PPFIA3-210ENST00000602800 FCGBPQ9Y6R7 5405 aaPredicted RBP9.78□□□□□ -0.84
PPFIA3-210ENST00000602800 NDUFS5O43920 106 aa9.74□□□□□ -0.85
PPFIA3-210ENST00000602800 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
PPFIA3-210ENST00000602800 MT2AP02795 61 aa9.69□□□□□ -0.86
PPFIA3-210ENST00000602800 KRTAP19-1Q8IUB9 90 aa9.67□□□□□ -0.86
PPFIA3-210ENST00000602800 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
PPFIA3-210ENST00000602800 A0A087WVE0 104 aa9.66□□□□□ -0.86
PPFIA3-210ENST00000602800 FAM236DA0A1B0GTK5 79 aa9.66□□□□□ -0.86
PPFIA3-210ENST00000602800 FAM236CP0DP71 79 aa9.66□□□□□ -0.86
PPFIA3-210ENST00000602800 SCGB1A1P11684 91 aa9.66□□□□□ -0.86
PPFIA3-210ENST00000602800 TP53AIP1Q9HCN2 124 aa9.63□□□□□ -0.87
PPFIA3-210ENST00000602800 LCE2BO14633 110 aa9.62□□□□□ -0.87
PPFIA3-210ENST00000602800 MT1FP04733 61 aa9.61□□□□□ -0.87
PPFIA3-210ENST00000602800 KRTAP10-10P60014 251 aa9.6□□□□□ -0.87
PPFIA3-210ENST00000602800 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
PPFIA3-210ENST00000602800 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
PPFIA3-210ENST00000602800 SYNE2Q8WXH0 6885 aaKnown RBP9.56□□□□□ -0.88
PPFIA3-210ENST00000602800 MACF1Q9UPN3 7388 aaKnown RBP9.56□□□□□ -0.88
PPFIA3-210ENST00000602800 Q5W150 140 aa9.52□□□□□ -0.89
PPFIA3-210ENST00000602800 FAM236AA0A1B0GUQ0 79 aa9.51□□□□□ -0.89
PPFIA3-210ENST00000602800 FAM236BA0A1B0GV22 79 aa9.51□□□□□ -0.89
PPFIA3-210ENST00000602800 UQCRQO14949 82 aa9.51□□□□□ -0.89
PPFIA3-210ENST00000602800 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
PPFIA3-210ENST00000602800 HRES1P13985 223 aa9.49□□□□□ -0.89
PPFIA3-210ENST00000602800 SPINK7P58062 85 aa9.48□□□□□ -0.89
PPFIA3-210ENST00000602800 ATOX1O00244 68 aa9.47□□□□□ -0.89
PPFIA3-210ENST00000602800 SMIM20Q8N5G0 67 aa9.45□□□□□ -0.9
PPFIA3-210ENST00000602800 TRAV22A0A0B4J277 110 aa9.44□□□□□ -0.9
PPFIA3-210ENST00000602800 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
PPFIA3-210ENST00000602800 IGKV2D-30A0A075B6S6 120 aa9.42□□□□□ -0.9
PPFIA3-210ENST00000602800 IGKV2-30P06310 120 aa9.42□□□□□ -0.9
PPFIA3-210ENST00000602800 C7orf65Q6ZTY9 151 aa9.42□□□□□ -0.9
PPFIA3-210ENST00000602800 H0Y9P7 68 aa9.39□□□□□ -0.91
PPFIA3-210ENST00000602800 KRTAP19-6Q3LI70 58 aa9.38□□□□□ -0.91
PPFIA3-210ENST00000602800 ANAPC13Q9BS18 74 aa9.38□□□□□ -0.91
PPFIA3-210ENST00000602800 MP68P56378 58 aa9.37□□□□□ -0.91
PPFIA3-210ENST00000602800 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
PPFIA3-210ENST00000602800 LOC101927531A0A1B0GV80 90 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms