RNA–Protein interactions for RNA: ENST00000602587.5

XIST-209, X inactive specific transcript, humanhuman

TSL 5

Gene XIST, Length 583 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-209ENST00000602587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.45□□□□□ -1.86
XIST-209ENST00000602587 BRD3OSQ6XYD6 125 aa3.44□□□□□ -1.86
XIST-209ENST00000602587 CUBNO60494 3623 aa3.44□□□□□ -1.86
XIST-209ENST00000602587 PTPN13Q12923 2485 aa3.44□□□□□ -1.86
XIST-209ENST00000602587 APCP25054 2843 aa3.43□□□□□ -1.86
XIST-209ENST00000602587 DEFB104AQ8WTQ1 72 aa3.43□□□□□ -1.86
XIST-209ENST00000602587 HELZ2Q9BYK8 2649 aaKnown RBP3.43□□□□□ -1.86
XIST-209ENST00000602587 POLQO75417 2590 aa3.43□□□□□ -1.86
XIST-209ENST00000602587 ABCA12Q86UK0 2595 aa3.43□□□□□ -1.86
XIST-209ENST00000602587 APELAP0DMC3 54 aa3.42□□□□□ -1.86
XIST-209ENST00000602587 GCN1Q92616 2671 aaKnown RBP3.42□□□□□ -1.86
XIST-209ENST00000602587 CENPEQ02224 2701 aa3.42□□□□□ -1.86
XIST-209ENST00000602587 NAV2Q8IVL1 2488 aa3.42□□□□□ -1.86
XIST-209ENST00000602587 MAP1AP78559 2803 aaPredicted RBP3.41□□□□□ -1.86
XIST-209ENST00000602587 H3BUX3 64 aa3.41□□□□□ -1.86
XIST-209ENST00000602587 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
XIST-209ENST00000602587 NAV3Q8IVL0 2385 aa3.41□□□□□ -1.86
XIST-209ENST00000602587 Q6ZRN7 208 aaPredicted RBP3.4□□□□□ -1.87
XIST-209ENST00000602587 FASNP49327 2511 aaKnown RBP3.4□□□□□ -1.87
XIST-209ENST00000602587 CSPG4Q6UVK1 2322 aa3.39□□□□□ -1.87
XIST-209ENST00000602587 PDZD2O15018 2839 aa3.39□□□□□ -1.87
XIST-209ENST00000602587 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
XIST-209ENST00000602587 CREBBPQ92793 2442 aa3.39□□□□□ -1.87
XIST-209ENST00000602587 ZANQ9Y493 2812 aa3.38□□□□□ -1.87
XIST-209ENST00000602587 CCDC168Q8NDH2 2452 aa3.38□□□□□ -1.87
XIST-209ENST00000602587 ITPR3Q14573 2671 aa3.38□□□□□ -1.87
XIST-209ENST00000602587 ITPR2Q14571 2701 aa3.37□□□□□ -1.87
XIST-209ENST00000602587 SMR3AQ99954 134 aa3.37□□□□□ -1.87
XIST-209ENST00000602587 UNC79Q9P2D8 2635 aa3.37□□□□□ -1.87
XIST-209ENST00000602587 HECTD1Q9ULT8 2610 aa3.37□□□□□ -1.87
XIST-209ENST00000602587 TEX15Q9BXT5 2789 aa3.36□□□□□ -1.87
XIST-209ENST00000602587 FLNAP21333 2647 aaKnown RBP3.36□□□□□ -1.87
XIST-209ENST00000602587 MMP24-AS1A0A0U1RRL7 71 aa3.36□□□□□ -1.87
XIST-209ENST00000602587 A8MTW9 85 aa3.36□□□□□ -1.87
XIST-209ENST00000602587 H0YAA0 97 aa3.36□□□□□ -1.87
XIST-209ENST00000602587 H3BUA1 57 aa3.36□□□□□ -1.87
XIST-209ENST00000602587 MYO9AB2RTY4 2548 aa3.35□□□□□ -1.87
XIST-209ENST00000602587 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
XIST-209ENST00000602587 H1FX-AS1Q4G0G2 97 aa3.35□□□□□ -1.87
XIST-209ENST00000602587 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
XIST-209ENST00000602587 DEFB105AQ8NG35 78 aa3.35□□□□□ -1.87
XIST-209ENST00000602587 TLN2Q9Y4G6 2542 aa3.34□□□□□ -1.87
XIST-209ENST00000602587 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
XIST-209ENST00000602587 KLK9Q2XQG4 91 aa3.34□□□□□ -1.87
XIST-209ENST00000602587 IGFL1Q6UW32 110 aa3.34□□□□□ -1.87
XIST-209ENST00000602587 Q6ZSA8 131 aa3.34□□□□□ -1.87
XIST-209ENST00000602587 FN1P02751 2386 aaKnown RBP3.34□□□□□ -1.87
XIST-209ENST00000602587 SONP18583 2426 aaKnown RBP3.34□□□□□ -1.87
XIST-209ENST00000602587 OTOGQ6ZRI0 2925 aa3.33□□□□□ -1.88
XIST-209ENST00000602587 ACANP16112 2415 aa3.33□□□□□ -1.88
XIST-209ENST00000602587 MXRA5Q9NR99 2828 aa3.33□□□□□ -1.88
XIST-209ENST00000602587 HIVEP2P31629 2446 aa3.32□□□□□ -1.88
XIST-209ENST00000602587 NOTCH2Q04721 2471 aa3.32□□□□□ -1.88
XIST-209ENST00000602587 CMYA5Q8N3K9 4069 aa3.31□□□□□ -1.88
XIST-209ENST00000602587 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
XIST-209ENST00000602587 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
XIST-209ENST00000602587 BAHCC1Q9P281 2608 aa3.31□□□□□ -1.88
XIST-209ENST00000602587 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
XIST-209ENST00000602587 DEFB136Q30KP8 78 aa3.29□□□□□ -1.88
XIST-209ENST00000602587 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
XIST-209ENST00000602587 DEFB130BP0DP73 79 aa3.28□□□□□ -1.88
XIST-209ENST00000602587 DEFB130AP0DP74 79 aa3.28□□□□□ -1.88
XIST-209ENST00000602587 CLPSL2Q6UWE3 100 aa3.28□□□□□ -1.88
XIST-209ENST00000602587 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
XIST-209ENST00000602587 MTORP42345 2549 aa3.28□□□□□ -1.88
XIST-209ENST00000602587 HIVEP1P15822 2718 aa3.28□□□□□ -1.89
XIST-209ENST00000602587 F8P00451 2351 aa3.27□□□□□ -1.89
XIST-209ENST00000602587 FLNBO75369 2602 aaKnown RBP3.27□□□□□ -1.89
XIST-209ENST00000602587 NOTCH3Q9UM47 2321 aa3.27□□□□□ -1.89
XIST-209ENST00000602587 RHPN1-AS1Q9BWJ2 59 aa3.26□□□□□ -1.89
XIST-209ENST00000602587 TRRAPQ9Y4A5 3859 aa3.25□□□□□ -1.89
XIST-209ENST00000602587 NF1P21359 2839 aa3.25□□□□□ -1.89
XIST-209ENST00000602587 NSD1Q96L73 2696 aaPredicted RBP3.25□□□□□ -1.89
XIST-209ENST00000602587 ANK2Q01484 3957 aa3.25□□□□□ -1.89
XIST-209ENST00000602587 WNK1Q9H4A3 2382 aa3.25□□□□□ -1.89
XIST-209ENST00000602587 KRTAP10-3P60369 221 aa3.23□□□□□ -1.89
XIST-209ENST00000602587 C2CD3Q4AC94 2353 aa3.23□□□□□ -1.89
XIST-209ENST00000602587 SETXQ7Z333 2677 aaKnown RBP3.22□□□□□ -1.89
XIST-209ENST00000602587 DEFB1P60022 68 aa3.22□□□□□ -1.89
XIST-209ENST00000602587 UNQ6190/PRO20217Q6UXQ8 127 aa3.22□□□□□ -1.89
XIST-209ENST00000602587 DNAH3Q8TD57 4116 aa3.21□□□□□ -1.89
XIST-209ENST00000602587 PRLHP81277 87 aa3.21□□□□□ -1.9
XIST-209ENST00000602587 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
XIST-209ENST00000602587 NIPBLQ6KC79 2804 aaeCLIP3.2□□□□□ -1.9
XIST-209ENST00000602587 SETD2Q9BYW2 2564 aaPredicted RBP3.2□□□□□ -1.9
XIST-209ENST00000602587 JMJD1CQ15652 2540 aa3.19□□□□□ -1.9
XIST-209ENST00000602587 C10orf95Q9H7T3 257 aa3.19□□□□□ -1.9
XIST-209ENST00000602587 TEP1Q99973 2627 aaKnown RBP3.19□□□□□ -1.9
XIST-209ENST00000602587 FBN1P35555 2871 aaKnown RBP3.18□□□□□ -1.9
XIST-209ENST00000602587 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
XIST-209ENST00000602587 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
XIST-209ENST00000602587 FLG2Q5D862 2391 aaPredicted RBP3.17□□□□□ -1.9
XIST-209ENST00000602587 DNHD1Q96M86 4753 aa3.16□□□□□ -1.9
XIST-209ENST00000602587 KRTAP13-3Q3SY46 172 aa3.16□□□□□ -1.9
XIST-209ENST00000602587 KRTAP13-2Q52LG2 175 aa3.16□□□□□ -1.9
XIST-209ENST00000602587 APLNQ9ULZ1 77 aa3.16□□□□□ -1.9
XIST-209ENST00000602587 ATRQ13535 2644 aa3.15□□□□□ -1.9
XIST-209ENST00000602587 K7EIL1 84 aa3.15□□□□□ -1.91
XIST-209ENST00000602587 HTN1P15515 57 aa3.15□□□□□ -1.91
XIST-209ENST00000602587 SPRR1AP35321 89 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms