RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SIGMAR1Q99720 223 aa8.96□□□□□ -0.98
SHKBP1-227ENST00000602011 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
SHKBP1-227ENST00000602011 BAALC-AS2P0C853 105 aa8.95□□□□□ -0.98
SHKBP1-227ENST00000602011 KRTAP19-1Q8IUB9 90 aa8.95□□□□□ -0.98
SHKBP1-227ENST00000602011 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
SHKBP1-227ENST00000602011 IGKV4-1P06312 121 aa8.93□□□□□ -0.98
SHKBP1-227ENST00000602011 ANKRD29Q8N6D5 301 aa8.93□□□□□ -0.98
SHKBP1-227ENST00000602011 MT2AP02795 61 aa8.92□□□□□ -0.98
SHKBP1-227ENST00000602011 LCE2BO14633 110 aa8.91□□□□□ -0.98
SHKBP1-227ENST00000602011 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
SHKBP1-227ENST00000602011 KRTAP16-1A8MUX0 517 aa8.9□□□□□ -0.98
SHKBP1-227ENST00000602011 MTURNQ8N3F0 131 aa8.89□□□□□ -0.99
SHKBP1-227ENST00000602011 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
SHKBP1-227ENST00000602011 MT1FP04733 61 aa8.87□□□□□ -0.99
SHKBP1-227ENST00000602011 C9JAW5 83 aa8.86□□□□□ -0.99
SHKBP1-227ENST00000602011 HRES1P13985 223 aa8.86□□□□□ -0.99
SHKBP1-227ENST00000602011 RBM3P98179 157 aaKnown RBP8.86□□□□□ -0.99
SHKBP1-227ENST00000602011 JMJD7-PLA2G4BH0Y9G9 81 aa8.85□□□□□ -0.99
SHKBP1-227ENST00000602011 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
SHKBP1-227ENST00000602011 LINC00472Q9H8W2 130 aa8.85□□□□□ -0.99
SHKBP1-227ENST00000602011 H3BT86 120 aa8.84□□□□□ -0.99
SHKBP1-227ENST00000602011 LINC00846Q9NV44 126 aa8.84□□□□□ -0.99
SHKBP1-227ENST00000602011 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
SHKBP1-227ENST00000602011 DSCR8Q96T75 97 aa8.83□□□□□ -1
SHKBP1-227ENST00000602011 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
SHKBP1-227ENST00000602011 C8orf87E5RJ46 101 aa8.82□□□□□ -1
SHKBP1-227ENST00000602011 SYNE2Q8WXH0 6885 aaKnown RBP8.81□□□□□ -1
SHKBP1-227ENST00000602011 GTF2H5Q6ZYL4 71 aa8.81□□□□□ -1
SHKBP1-227ENST00000602011 MACF1Q9UPN3 7388 aaKnown RBP8.8□□□□□ -1
SHKBP1-227ENST00000602011 IGHV6-1A0A0B4J1U7 121 aa8.8□□□□□ -1
SHKBP1-227ENST00000602011 K7EP34 96 aa8.8□□□□□ -1
SHKBP1-227ENST00000602011 CCKP06307 115 aa8.8□□□□□ -1
SHKBP1-227ENST00000602011 C21orf62-AS1Q17RA5 79 aa8.8□□□□□ -1
SHKBP1-227ENST00000602011 PDE6GP18545 87 aa8.79□□□□□ -1
SHKBP1-227ENST00000602011 A0A1B0GV72 72 aa8.77□□□□□ -1.01
SHKBP1-227ENST00000602011 DEFB116Q30KQ4 102 aa8.77□□□□□ -1.01
SHKBP1-227ENST00000602011 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
SHKBP1-227ENST00000602011 LOC110117498A0A087WWA1 95 aa8.74□□□□□ -1.01
SHKBP1-227ENST00000602011 A0A1B0GW54 56 aa8.74□□□□□ -1.01
SHKBP1-227ENST00000602011 J3KT08 172 aa8.74□□□□□ -1.01
SHKBP1-227ENST00000602011 F8W1H4 67 aa8.72□□□□□ -1.01
SHKBP1-227ENST00000602011 ZCCHC13Q8WW36 166 aaKnown RBP8.72□□□□□ -1.01
SHKBP1-227ENST00000602011 SPINK7P58062 85 aa8.7□□□□□ -1.02
SHKBP1-227ENST00000602011 Q6ZQT0 140 aa8.7□□□□□ -1.02
SHKBP1-227ENST00000602011 VPS25Q9BRG1 176 aa8.7□□□□□ -1.02
SHKBP1-227ENST00000602011 PRO0461Q9UI25 63 aa8.7□□□□□ -1.02
SHKBP1-227ENST00000602011 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
SHKBP1-227ENST00000602011 C14orf132Q9NPU4 83 aa8.69□□□□□ -1.02
SHKBP1-227ENST00000602011 A8MWP4 228 aa8.67□□□□□ -1.02
SHKBP1-227ENST00000602011 NDUFB1O75438 58 aa8.67□□□□□ -1.02
SHKBP1-227ENST00000602011 Q8N9P0 234 aaPredicted RBP8.65□□□□□ -1.02
SHKBP1-227ENST00000602011 KRTAP19-6Q3LI70 58 aa8.62□□□□□ -1.03
SHKBP1-227ENST00000602011 A0A1B0GV90 55 aa8.56□□□□□ -1.04
SHKBP1-227ENST00000602011 NREPQ16612 68 aa8.56□□□□□ -1.04
SHKBP1-227ENST00000602011 ETDBQ3ZM63 59 aa8.55□□□□□ -1.04
SHKBP1-227ENST00000602011 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
SHKBP1-227ENST00000602011 C8orf17Q9NRJ1 99 aa8.53□□□□□ -1.04
SHKBP1-227ENST00000602011 Q6ZVQ6 151 aa8.49□□□□□ -1.05
SHKBP1-227ENST00000602011 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
SHKBP1-227ENST00000602011 KRTAP6-3Q3LI67 103 aa8.48□□□□□ -1.05
SHKBP1-227ENST00000602011 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
SHKBP1-227ENST00000602011 UBL5Q9BZL1 73 aa8.45□□□□□ -1.06
SHKBP1-227ENST00000602011 PRR15Q8IV56 129 aa8.44□□□□□ -1.06
SHKBP1-227ENST00000602011 BPY2O14599 106 aa8.42□□□□□ -1.06
SHKBP1-227ENST00000602011 ACYP1P07311 99 aa8.42□□□□□ -1.06
SHKBP1-227ENST00000602011 TMEM254Q8TBM7 123 aa8.41□□□□□ -1.06
SHKBP1-227ENST00000602011 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
SHKBP1-227ENST00000602011 FAM240AA0A1B0GVK7 77 aa8.37□□□□□ -1.07
SHKBP1-227ENST00000602011 NEBP20929 6669 aa8.33□□□□□ -1.08
SHKBP1-227ENST00000602011 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
SHKBP1-227ENST00000602011 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
SHKBP1-227ENST00000602011 J3QR89 54 aa8.32□□□□□ -1.08
SHKBP1-227ENST00000602011 K7EQZ3 153 aa8.3□□□□□ -1.08
SHKBP1-227ENST00000602011 NDUFS5O43920 106 aa8.3□□□□□ -1.08
SHKBP1-227ENST00000602011 CXCL6P80162 114 aa8.3□□□□□ -1.08
SHKBP1-227ENST00000602011 C7orf65Q6ZTY9 151 aa8.29□□□□□ -1.08
SHKBP1-227ENST00000602011 MUC12Q9UKN1 5478 aa8.25□□□□□ -1.09
SHKBP1-227ENST00000602011 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
SHKBP1-227ENST00000602011 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
SHKBP1-227ENST00000602011 ATP5EP2Q5VTU8 51 aa8.23□□□□□ -1.09
SHKBP1-227ENST00000602011 Q8N9L7 120 aa8.22□□□□□ -1.09
SHKBP1-227ENST00000602011 LINC00643Q86TS7 51 aa8.21□□□□□ -1.1
SHKBP1-227ENST00000602011 CASC2Q6XLA1 102 aa8.19□□□□□ -1.1
SHKBP1-227ENST00000602011 Q5W150 140 aa8.18□□□□□ -1.1
SHKBP1-227ENST00000602011 HCG22E2RYF7 251 aa8.17□□□□□ -1.1
SHKBP1-227ENST00000602011 K7ERU9 68 aa8.15□□□□□ -1.1
SHKBP1-227ENST00000602011 A6NN06 94 aa8.13□□□□□ -1.11
SHKBP1-227ENST00000602011 C4orf26Q17RF5 130 aa8.13□□□□□ -1.11
SHKBP1-227ENST00000602011 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
SHKBP1-227ENST00000602011 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
SHKBP1-227ENST00000602011 HIST1H4AP62805 103 aaKnown RBP8.1□□□□□ -1.11
SHKBP1-227ENST00000602011 KRTAP20-1Q3LI63 56 aa8.1□□□□□ -1.11
SHKBP1-227ENST00000602011 Q5VV11 94 aa8.09□□□□□ -1.11
SHKBP1-227ENST00000602011 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
SHKBP1-227ENST00000602011 C5orf47Q569G3 176 aa8.08□□□□□ -1.12
SHKBP1-227ENST00000602011 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
SHKBP1-227ENST00000602011 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
SHKBP1-227ENST00000602011 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
SHKBP1-227ENST00000602011 S4R3F8 94 aa8.04□□□□□ -1.12
SHKBP1-227ENST00000602011 MT1BP07438 61 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms