RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 FAM218AQ96MZ4 157 aa4.83□□□□□ -1.64
VRK3-224ENST00000601849 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
VRK3-224ENST00000601849 A0A1B0GX51 115 aa4.82□□□□□ -1.64
VRK3-224ENST00000601849 KRTAP10-10P60014 251 aa4.82□□□□□ -1.64
VRK3-224ENST00000601849 A0A1W2PPM0 123 aa4.81□□□□□ -1.64
VRK3-224ENST00000601849 IGKV4-1P06312 121 aa4.81□□□□□ -1.64
VRK3-224ENST00000601849 H3BQ85 93 aa4.8□□□□□ -1.64
VRK3-224ENST00000601849 ANKRD29Q8N6D5 301 aa4.8□□□□□ -1.64
VRK3-224ENST00000601849 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
VRK3-224ENST00000601849 MT2AP02795 61 aa4.79□□□□□ -1.64
VRK3-224ENST00000601849 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
VRK3-224ENST00000601849 TRBV7-4A0A0J9YYF1 115 aa4.78□□□□□ -1.64
VRK3-224ENST00000601849 DNAL4O96015 105 aa4.78□□□□□ -1.64
VRK3-224ENST00000601849 ATXN8Q156A1 80 aa4.78□□□□□ -1.64
VRK3-224ENST00000601849 SPCS1Q9Y6A9 102 aa4.78□□□□□ -1.64
VRK3-224ENST00000601849 GTF2H5Q6ZYL4 71 aa4.77□□□□□ -1.65
VRK3-224ENST00000601849 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
VRK3-224ENST00000601849 A0A1B0GV90 55 aa4.76□□□□□ -1.65
VRK3-224ENST00000601849 K7EP34 96 aa4.76□□□□□ -1.65
VRK3-224ENST00000601849 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
VRK3-224ENST00000601849 A0A1W2PNM2 257 aa4.75□□□□□ -1.65
VRK3-224ENST00000601849 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
VRK3-224ENST00000601849 H3BS24 57 aa4.75□□□□□ -1.65
VRK3-224ENST00000601849 TMEM256-PLSCR3K7ERE1 68 aa4.75□□□□□ -1.65
VRK3-224ENST00000601849 TRACP01848 142 aa4.75□□□□□ -1.65
VRK3-224ENST00000601849 MT1FP04733 61 aa4.74□□□□□ -1.65
VRK3-224ENST00000601849 HRES1P13985 223 aa4.74□□□□□ -1.65
VRK3-224ENST00000601849 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
VRK3-224ENST00000601849 ORMDL1Q9P0S3 153 aa4.74□□□□□ -1.65
VRK3-224ENST00000601849 C8orf87E5RJ46 101 aa4.73□□□□□ -1.65
VRK3-224ENST00000601849 CCKP06307 115 aa4.73□□□□□ -1.65
VRK3-224ENST00000601849 DEFB116Q30KQ4 102 aa4.73□□□□□ -1.65
VRK3-224ENST00000601849 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
VRK3-224ENST00000601849 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
VRK3-224ENST00000601849 C9JAW5 83 aa4.72□□□□□ -1.65
VRK3-224ENST00000601849 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
VRK3-224ENST00000601849 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.66
VRK3-224ENST00000601849 A0A1B0GV72 72 aa4.7□□□□□ -1.66
VRK3-224ENST00000601849 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
VRK3-224ENST00000601849 A8MWP4 228 aa4.69□□□□□ -1.66
VRK3-224ENST00000601849 J3KT08 172 aa4.69□□□□□ -1.66
VRK3-224ENST00000601849 BAALC-AS2P0C853 105 aa4.69□□□□□ -1.66
VRK3-224ENST00000601849 SPINK7P58062 85 aa4.69□□□□□ -1.66
VRK3-224ENST00000601849 VPS25Q9BRG1 176 aa4.69□□□□□ -1.66
VRK3-224ENST00000601849 F8W1H4 67 aa4.68□□□□□ -1.66
VRK3-224ENST00000601849 H3BT86 120 aa4.68□□□□□ -1.66
VRK3-224ENST00000601849 NDUFB1O75438 58 aa4.68□□□□□ -1.66
VRK3-224ENST00000601849 ZCCHC13Q8WW36 166 aaKnown RBP4.68□□□□□ -1.66
VRK3-224ENST00000601849 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
VRK3-224ENST00000601849 RBM3P98179 157 aaKnown RBP4.66□□□□□ -1.66
VRK3-224ENST00000601849 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
VRK3-224ENST00000601849 PRO0461Q9UI25 63 aa4.64□□□□□ -1.67
VRK3-224ENST00000601849 JMJD7-PLA2G4BH0Y9G9 81 aa4.62□□□□□ -1.67
VRK3-224ENST00000601849 WFDC13Q8IUB5 93 aa4.62□□□□□ -1.67
VRK3-224ENST00000601849 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
VRK3-224ENST00000601849 ETDBQ3ZM63 59 aa4.61□□□□□ -1.67
VRK3-224ENST00000601849 LOC110117498A0A087WWA1 95 aa4.59□□□□□ -1.67
VRK3-224ENST00000601849 Q6ZQT0 140 aa4.59□□□□□ -1.67
VRK3-224ENST00000601849 A0A1B0GW54 56 aa4.58□□□□□ -1.68
VRK3-224ENST00000601849 PDE6GP18545 87 aa4.58□□□□□ -1.68
VRK3-224ENST00000601849 PCP4P48539 62 aa4.58□□□□□ -1.68
VRK3-224ENST00000601849 C14orf132Q9NPU4 83 aa4.58□□□□□ -1.68
VRK3-224ENST00000601849 C8orf17Q9NRJ1 99 aa4.57□□□□□ -1.68
VRK3-224ENST00000601849 IGKV3D-7A0A0C4DH55 119 aa4.56□□□□□ -1.68
VRK3-224ENST00000601849 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
VRK3-224ENST00000601849 J3QR89 54 aa4.55□□□□□ -1.68
VRK3-224ENST00000601849 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
VRK3-224ENST00000601849 Q6ZVQ6 151 aa4.55□□□□□ -1.68
VRK3-224ENST00000601849 K7ERU9 68 aa4.52□□□□□ -1.69
VRK3-224ENST00000601849 NDUFS5O43920 106 aa4.51□□□□□ -1.69
VRK3-224ENST00000601849 NREPQ16612 68 aa4.51□□□□□ -1.69
VRK3-224ENST00000601849 MRPL34Q9BQ48 92 aaKnown RBP4.51□□□□□ -1.69
VRK3-224ENST00000601849 PRR15Q8IV56 129 aa4.5□□□□□ -1.69
VRK3-224ENST00000601849 TMEM254Q8TBM7 123 aa4.5□□□□□ -1.69
VRK3-224ENST00000601849 NEBP20929 6669 aa4.49□□□□□ -1.69
VRK3-224ENST00000601849 ACYP1P07311 99 aa4.49□□□□□ -1.69
VRK3-224ENST00000601849 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
VRK3-224ENST00000601849 hDV103S1A0JD37 113 aa4.47□□□□□ -1.69
VRK3-224ENST00000601849 UBL5Q9BZL1 73 aa4.47□□□□□ -1.69
VRK3-224ENST00000601849 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
VRK3-224ENST00000601849 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
VRK3-224ENST00000601849 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
VRK3-224ENST00000601849 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
VRK3-224ENST00000601849 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
VRK3-224ENST00000601849 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
VRK3-224ENST00000601849 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
VRK3-224ENST00000601849 A6NN06 94 aa4.43□□□□□ -1.7
VRK3-224ENST00000601849 BPY2O14599 106 aa4.41□□□□□ -1.7
VRK3-224ENST00000601849 K7EQZ3 153 aa4.4□□□□□ -1.71
VRK3-224ENST00000601849 ATP5EP2Q5VTU8 51 aa4.4□□□□□ -1.71
VRK3-224ENST00000601849 LINC00643Q86TS7 51 aa4.4□□□□□ -1.71
VRK3-224ENST00000601849 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
VRK3-224ENST00000601849 Q5VV11 94 aa4.39□□□□□ -1.71
VRK3-224ENST00000601849 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
VRK3-224ENST00000601849 C5orf47Q569G3 176 aa4.38□□□□□ -1.71
VRK3-224ENST00000601849 CXCL6P80162 114 aa4.37□□□□□ -1.71
VRK3-224ENST00000601849 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
VRK3-224ENST00000601849 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
VRK3-224ENST00000601849 HCG22E2RYF7 251 aa4.36□□□□□ -1.71
VRK3-224ENST00000601849 Q5W150 140 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms