RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 A0A1B0GXF2 115 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 F8W1H4 67 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 TMEM250H0YL14 139 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 SPINK8P0C7L1 97 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 PSMB2P49721 201 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 KRTDAPP60985 99 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 ATP11AUNQ6ZP68 121 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 C18orf32Q8TCD1 76 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 ZNF625Q96I27 306 aaPredicted RBP1.92□□□□□ -2.1
VRK3-222ENST00000601324 SMIM27A0A1W2PRY6 76 aa1.91□□□□□ -2.1
VRK3-222ENST00000601324 C3orf79P0CE67 100 aa1.91□□□□□ -2.1
VRK3-222ENST00000601324 FABP2P12104 132 aa1.91□□□□□ -2.1
VRK3-222ENST00000601324 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
VRK3-222ENST00000601324 SMIM7Q9BQ49 75 aa1.91□□□□□ -2.1
VRK3-222ENST00000601324 ANAPC13Q9BS18 74 aa1.91□□□□□ -2.1
VRK3-222ENST00000601324 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
VRK3-222ENST00000601324 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
VRK3-222ENST00000601324 TRBV20-1A0A075B6N2 111 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 LOC389332A0A1B0GUA5 103 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 A0A1W2PPM0 123 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 H7C2G1 150 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 NDUFS5O43920 106 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 RPS28P62857 69 aaKnown RBP1.9□□□□□ -2.11
VRK3-222ENST00000601324 Q8N8P6 123 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 SPANXDQ9BXN6 97 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 SPCS1Q9Y6A9 102 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 R4GN34 69 aa1.9□□□□□ -2.11
VRK3-222ENST00000601324 LOC107984156A0A0G2JMH3 177 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 A8MWP4 228 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 H3BUT2 72 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 NCR3O14931 201 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 SMIM13P0DJ93 91 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 ARL17AQ8IVW1 177 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 TOMM6Q96B49 74 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 OBSCN-AS1Q96MR7 158 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 PRELID3AQ96N28 172 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 MAP1LC3AQ9H492 121 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 SPANXB1Q9NS25 103 aaPredicted RBP1.89□□□□□ -2.11
VRK3-222ENST00000601324 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
VRK3-222ENST00000601324 FAM240AA0A1B0GVK7 77 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 A0A1B0GX51 115 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 K7EMI3 77 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 COX8AP10176 69 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 ZNF22P17026 224 aaPredicted RBP1.88□□□□□ -2.11
VRK3-222ENST00000601324 PMVKQ15126 192 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 OR13C6PQ8NH95 151 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
VRK3-222ENST00000601324 H3BMG7 143 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 SYS1-DBNDD2H3BUS1 97 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 MT-ATP8P03928 68 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 IFITM1P13164 125 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 SPRR2DP22532 72 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 MEIG1Q5JSS6 88 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 ATOH7Q8N100 152 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 MAP1LC3CQ9BXW4 147 aa1.87□□□□□ -2.11
VRK3-222ENST00000601324 TRBV10-2A0A0K0K1G8 114 aa1.86□□□□□ -2.11
VRK3-222ENST00000601324 LINC01546A6NGU7 62 aa1.86□□□□□ -2.11
VRK3-222ENST00000601324 CCDC179H3BU77 68 aa1.86□□□□□ -2.11
VRK3-222ENST00000601324 J3KT08 172 aa1.86□□□□□ -2.11
VRK3-222ENST00000601324 ETDBQ3ZM63 59 aa1.86□□□□□ -2.11
VRK3-222ENST00000601324 C2orf91Q6ZV80 131 aa1.86□□□□□ -2.11
VRK3-222ENST00000601324 PPDPFLQ8WWR9 84 aa1.86□□□□□ -2.11
VRK3-222ENST00000601324 CHCHD1Q96BP2 118 aaKnown RBP1.86□□□□□ -2.11
VRK3-222ENST00000601324 FAM236DA0A1B0GTK5 79 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 C9JAW5 83 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 SNCGO76070 127 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 LEPROTL1O95214 131 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 FAM236CP0DP71 79 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 LINC00158P58513 81 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 RAB37Q96AX2 223 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 HIGD1BQ9P298 99 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 LAMTOR3Q9UHA4 124 aa1.85□□□□□ -2.11
VRK3-222ENST00000601324 ZNF73O43830 326 aaPredicted RBP1.84□□□□□ -2.11
VRK3-222ENST00000601324 TAL2Q16559 108 aa1.84□□□□□ -2.11
VRK3-222ENST00000601324 LINC01545Q5VT33 79 aa1.84□□□□□ -2.11
VRK3-222ENST00000601324 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
VRK3-222ENST00000601324 SFTA2Q6UW10 78 aa1.84□□□□□ -2.11
VRK3-222ENST00000601324 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
VRK3-222ENST00000601324 Q96NJ1 140 aa1.84□□□□□ -2.11
VRK3-222ENST00000601324 SCGB3A1Q96QR1 104 aa1.84□□□□□ -2.11
VRK3-222ENST00000601324 RBM12B-AS1Q9P1G2 102 aa1.84□□□□□ -2.11
VRK3-222ENST00000601324 IGLV5-48A0A075B6I7 105 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 C11orf86A6NJI1 115 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 H3BQ85 93 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 SCGB1C2P0DMR2 95 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 LYRM7Q5U5X0 104 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 ATP5L2Q7Z4Y8 100 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 TEN1Q86WV5 123 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 NAA38Q9BRA0 125 aaKnown RBP1.83□□□□□ -2.12
VRK3-222ENST00000601324 IMUPQ9GZP8 106 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 NXT2Q9NPJ8 142 aaKnown RBP1.83□□□□□ -2.12
VRK3-222ENST00000601324 V9GYY9 64 aa1.83□□□□□ -2.12
VRK3-222ENST00000601324 TRAV23DV6A0A075B6W5 121 aa1.82□□□□□ -2.12
VRK3-222ENST00000601324 UQCRQO14949 82 aa1.82□□□□□ -2.12
VRK3-222ENST00000601324 TCL1BO95988 128 aa1.82□□□□□ -2.12
VRK3-222ENST00000601324 SPRR2GQ9BYE4 73 aa1.82□□□□□ -2.12
VRK3-222ENST00000601324 TEX49A0A1B0GTD5 131 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 NDUFC2O95298 119 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms