RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
NOTCH3-206ENST00000601011 Q96NJ1 140 aa7.67□□□□□ -1.18
NOTCH3-206ENST00000601011 A0A087X002 238 aa7.66□□□□□ -1.18
NOTCH3-206ENST00000601011 A0A1B0GW54 56 aa7.66□□□□□ -1.18
NOTCH3-206ENST00000601011 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
NOTCH3-206ENST00000601011 SPINK7P58062 85 aa7.65□□□□□ -1.18
NOTCH3-206ENST00000601011 LINC00313P59037 77 aa7.65□□□□□ -1.18
NOTCH3-206ENST00000601011 KTN1-AS1Q86SY8 53 aa7.65□□□□□ -1.18
NOTCH3-206ENST00000601011 PRKDCP78527 4128 aaKnown RBP7.65□□□□□ -1.18
NOTCH3-206ENST00000601011 CD164Q04900 197 aa7.64□□□□□ -1.19
NOTCH3-206ENST00000601011 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
NOTCH3-206ENST00000601011 MRPL34Q9BQ48 92 aaKnown RBP7.63□□□□□ -1.19
NOTCH3-206ENST00000601011 DNAH7Q8WXX0 4024 aa7.6□□□□□ -1.19
NOTCH3-206ENST00000601011 DNAH9Q9NYC9 4486 aa7.59□□□□□ -1.19
NOTCH3-206ENST00000601011 Q6ZR54 194 aa7.59□□□□□ -1.19
NOTCH3-206ENST00000601011 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
NOTCH3-206ENST00000601011 CYP4F30PQ9H0H9 118 aa7.58□□□□□ -1.2
NOTCH3-206ENST00000601011 LCA10Q71F78 164 aa7.58□□□□□ -1.2
NOTCH3-206ENST00000601011 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
NOTCH3-206ENST00000601011 PLAC8Q9NZF1 115 aa7.58□□□□□ -1.2
NOTCH3-206ENST00000601011 TP53AIP1Q9HCN2 124 aa7.57□□□□□ -1.2
NOTCH3-206ENST00000601011 ACYP2P14621 99 aa7.57□□□□□ -1.2
NOTCH3-206ENST00000601011 STARD9Q9P2P6 4700 aa7.57□□□□□ -1.2
NOTCH3-206ENST00000601011 MMP24-AS1A0A0U1RRL7 71 aa7.56□□□□□ -1.2
NOTCH3-206ENST00000601011 KMT2AQ03164 3969 aa7.56□□□□□ -1.2
NOTCH3-206ENST00000601011 H3BPC8 53 aa7.55□□□□□ -1.2
NOTCH3-206ENST00000601011 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
NOTCH3-206ENST00000601011 Q8N1X5 172 aa7.53□□□□□ -1.2
NOTCH3-206ENST00000601011 HRES1P13985 223 aa7.53□□□□□ -1.2
NOTCH3-206ENST00000601011 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
NOTCH3-206ENST00000601011 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.21
NOTCH3-206ENST00000601011 ADM2Q7Z4H4 148 aa7.51□□□□□ -1.21
NOTCH3-206ENST00000601011 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
NOTCH3-206ENST00000601011 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
NOTCH3-206ENST00000601011 SPANXA2-OT1Q8N9U9 137 aa7.5□□□□□ -1.21
NOTCH3-206ENST00000601011 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
NOTCH3-206ENST00000601011 SSBP3-AS1Q7Z2R9 100 aa7.49□□□□□ -1.21
NOTCH3-206ENST00000601011 C8orf87E5RJ46 101 aa7.49□□□□□ -1.21
NOTCH3-206ENST00000601011 SPRR1BP22528 89 aa7.47□□□□□ -1.21
NOTCH3-206ENST00000601011 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.21
NOTCH3-206ENST00000601011 Q75L30 129 aa7.46□□□□□ -1.22
NOTCH3-206ENST00000601011 KRTAP29-1A8MX34 341 aaPredicted RBP7.45□□□□□ -1.22
NOTCH3-206ENST00000601011 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
NOTCH3-206ENST00000601011 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
NOTCH3-206ENST00000601011 Q5W150 140 aa7.43□□□□□ -1.22
NOTCH3-206ENST00000601011 DNAH11Q96DT5 4516 aa7.42□□□□□ -1.22
NOTCH3-206ENST00000601011 UQCR11O14957 56 aa7.42□□□□□ -1.22
NOTCH3-206ENST00000601011 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
NOTCH3-206ENST00000601011 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
NOTCH3-206ENST00000601011 DNAH1Q9P2D7 4330 aa7.38□□□□□ -1.23
NOTCH3-206ENST00000601011 FRAS1Q86XX4 4008 aa7.37□□□□□ -1.23
NOTCH3-206ENST00000601011 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
NOTCH3-206ENST00000601011 K7ERS5 55 aa7.35□□□□□ -1.23
NOTCH3-206ENST00000601011 H3BS24 57 aa7.34□□□□□ -1.23
NOTCH3-206ENST00000601011 LCE6AA0A183 80 aa7.33□□□□□ -1.24
NOTCH3-206ENST00000601011 LINC00483Q53H64 154 aa7.33□□□□□ -1.24
NOTCH3-206ENST00000601011 A0A0D9SG42 100 aa7.3□□□□□ -1.24
NOTCH3-206ENST00000601011 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
NOTCH3-206ENST00000601011 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
NOTCH3-206ENST00000601011 DNAH3Q8TD57 4116 aa7.29□□□□□ -1.24
NOTCH3-206ENST00000601011 A6NN06 94 aa7.28□□□□□ -1.24
NOTCH3-206ENST00000601011 DNAH6Q9C0G6 4158 aa7.28□□□□□ -1.24
NOTCH3-206ENST00000601011 VPS13DQ5THJ4 4388 aa7.27□□□□□ -1.25
NOTCH3-206ENST00000601011 FAT1Q14517 4588 aa7.25□□□□□ -1.25
NOTCH3-206ENST00000601011 Q5VSD8 79 aa7.23□□□□□ -1.25
NOTCH3-206ENST00000601011 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
NOTCH3-206ENST00000601011 LRP1BQ9NZR2 4599 aa7.21□□□□□ -1.25
NOTCH3-206ENST00000601011 DNAH2Q9P225 4427 aa7.21□□□□□ -1.25
NOTCH3-206ENST00000601011 HYDINQ4G0P3 5121 aa7.21□□□□□ -1.26
NOTCH3-206ENST00000601011 DNAH17Q9UFH2 4485 aa7.17□□□□□ -1.26
NOTCH3-206ENST00000601011 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
NOTCH3-206ENST00000601011 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
NOTCH3-206ENST00000601011 J3QL48 77 aa7.14□□□□□ -1.27
NOTCH3-206ENST00000601011 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
NOTCH3-206ENST00000601011 Q6ZSA8 131 aa7.11□□□□□ -1.27
NOTCH3-206ENST00000601011 PKHD1P08F94 4074 aa7.1□□□□□ -1.27
NOTCH3-206ENST00000601011 DMAC1Q96GE9 116 aa7.09□□□□□ -1.27
NOTCH3-206ENST00000601011 A0A1B0GU33 70 aa7.08□□□□□ -1.28
NOTCH3-206ENST00000601011 MYCBP2O75592 4640 aa7.07□□□□□ -1.28
NOTCH3-206ENST00000601011 HECTD4Q9Y4D8 3996 aa7.07□□□□□ -1.28
NOTCH3-206ENST00000601011 VPS13BQ7Z7G8 4022 aa7.01□□□□□ -1.29
NOTCH3-206ENST00000601011 KMT2CQ8NEZ4 4911 aaKnown RBP7□□□□□ -1.29
NOTCH3-206ENST00000601011 DYNC2H1Q8NCM8 4307 aaKnown RBP6.97□□□□□ -1.29
NOTCH3-206ENST00000601011 DYNC1H1Q14204 4646 aaKnown RBP6.96□□□□□ -1.3
NOTCH3-206ENST00000601011 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
NOTCH3-206ENST00000601011 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
NOTCH3-206ENST00000601011 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
NOTCH3-206ENST00000601011 COX6B2Q6YFQ2 88 aa6.93□□□□□ -1.3
NOTCH3-206ENST00000601011 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
NOTCH3-206ENST00000601011 FAT2Q9NYQ8 4349 aa6.91□□□□□ -1.3
NOTCH3-206ENST00000601011 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
NOTCH3-206ENST00000601011 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
NOTCH3-206ENST00000601011 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
NOTCH3-206ENST00000601011 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
NOTCH3-206ENST00000601011 KRTAP21-3Q3LHN1 58 aa6.82□□□□□ -1.32
NOTCH3-206ENST00000601011 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
NOTCH3-206ENST00000601011 KRTAP13-3Q3SY46 172 aa6.8□□□□□ -1.32
NOTCH3-206ENST00000601011 C10orf95Q9H7T3 257 aa6.8□□□□□ -1.32
NOTCH3-206ENST00000601011 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
NOTCH3-206ENST00000601011 RYR1P21817 5038 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms