RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 V9GYY9 64 aa10.28□□□□□ -0.76
SHKBP1-224ENST00000600718 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SHKBP1-224ENST00000600718 DEFB116Q30KQ4 102 aa10.26□□□□□ -0.77
SHKBP1-224ENST00000600718 Q8N1X5 172 aa10.26□□□□□ -0.77
SHKBP1-224ENST00000600718 DSCR10P59022 87 aa10.25□□□□□ -0.77
SHKBP1-224ENST00000600718 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
SHKBP1-224ENST00000600718 C1orf195Q5TG92 126 aa10.24□□□□□ -0.77
SHKBP1-224ENST00000600718 Q96NJ1 140 aa10.23□□□□□ -0.77
SHKBP1-224ENST00000600718 HSPG2P98160 4391 aa10.23□□□□□ -0.77
SHKBP1-224ENST00000600718 ASB16-AS1Q495Z4 193 aa10.22□□□□□ -0.77
SHKBP1-224ENST00000600718 KRTAP17-1Q9BYP8 105 aa10.22□□□□□ -0.77
SHKBP1-224ENST00000600718 SPINK1P00995 79 aa10.21□□□□□ -0.78
SHKBP1-224ENST00000600718 SPAG11AQ6PDA7 123 aa10.21□□□□□ -0.78
SHKBP1-224ENST00000600718 LINC00304Q8N9R0 145 aa10.19□□□□□ -0.78
SHKBP1-224ENST00000600718 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
SHKBP1-224ENST00000600718 RYR1P21817 5038 aa10.19□□□□□ -0.78
SHKBP1-224ENST00000600718 K7EQZ3 153 aa10.18□□□□□ -0.78
SHKBP1-224ENST00000600718 BRK1Q8WUW1 75 aa10.18□□□□□ -0.78
SHKBP1-224ENST00000600718 A8MWP4 228 aa10.17□□□□□ -0.78
SHKBP1-224ENST00000600718 MPLKIPQ8TAP9 179 aa10.17□□□□□ -0.78
SHKBP1-224ENST00000600718 PKHD1L1Q86WI1 4243 aa10.15□□□□□ -0.78
SHKBP1-224ENST00000600718 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-224ENST00000600718 EPPK1P58107 5090 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-224ENST00000600718 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
SHKBP1-224ENST00000600718 NDUFB1O75438 58 aa10.14□□□□□ -0.79
SHKBP1-224ENST00000600718 PRR15Q8IV56 129 aa10.14□□□□□ -0.79
SHKBP1-224ENST00000600718 ZCCHC13Q8WW36 166 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-224ENST00000600718 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
SHKBP1-224ENST00000600718 Q1T7F1 81 aa10.08□□□□□ -0.8
SHKBP1-224ENST00000600718 KIAA1109Q2LD37 5005 aa10.08□□□□□ -0.8
SHKBP1-224ENST00000600718 A0A1B0GVX0 72 aa10.06□□□□□ -0.8
SHKBP1-224ENST00000600718 HCG22E2RYF7 251 aa10.06□□□□□ -0.8
SHKBP1-224ENST00000600718 CYP4F30PQ9H0H9 118 aa10.06□□□□□ -0.8
SHKBP1-224ENST00000600718 C1orf64Q8NEQ6 169 aa10.06□□□□□ -0.8
SHKBP1-224ENST00000600718 IGHV6-1A0A0B4J1U7 121 aa10.02□□□□□ -0.81
SHKBP1-224ENST00000600718 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
SHKBP1-224ENST00000600718 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
SHKBP1-224ENST00000600718 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
SHKBP1-224ENST00000600718 CASC2Q6XLA1 102 aa10□□□□□ -0.81
SHKBP1-224ENST00000600718 WFDC13Q8IUB5 93 aa10□□□□□ -0.81
SHKBP1-224ENST00000600718 PMAIP1Q13794 54 aa9.98□□□□□ -0.81
SHKBP1-224ENST00000600718 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
SHKBP1-224ENST00000600718 C8orf87E5RJ46 101 aa9.96□□□□□ -0.81
SHKBP1-224ENST00000600718 MP68P56378 58 aa9.94□□□□□ -0.82
SHKBP1-224ENST00000600718 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
SHKBP1-224ENST00000600718 NOTCH2NLQ7Z3S9 236 aa9.94□□□□□ -0.82
SHKBP1-224ENST00000600718 TRAV22A0A0B4J277 110 aa9.92□□□□□ -0.82
SHKBP1-224ENST00000600718 LINC00313P59037 77 aa9.92□□□□□ -0.82
SHKBP1-224ENST00000600718 H3BPC8 53 aa9.9□□□□□ -0.82
SHKBP1-224ENST00000600718 SPANXA2-OT1Q8N9U9 137 aa9.89□□□□□ -0.83
SHKBP1-224ENST00000600718 MRPL34Q9BQ48 92 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-224ENST00000600718 LRP1Q07954 4544 aaKnown RBP9.87□□□□□ -0.83
SHKBP1-224ENST00000600718 PSPHP1O15172 72 aa9.86□□□□□ -0.83
SHKBP1-224ENST00000600718 PRR4Q16378 134 aa9.86□□□□□ -0.83
SHKBP1-224ENST00000600718 FAT3Q8TDW7 4589 aa9.86□□□□□ -0.83
SHKBP1-224ENST00000600718 TNXBP22105 4242 aa9.85□□□□□ -0.83
SHKBP1-224ENST00000600718 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
SHKBP1-224ENST00000600718 LINC00208Q96KT6 92 aa9.84□□□□□ -0.83
SHKBP1-224ENST00000600718 FLG2Q5D862 2391 aaPredicted RBP9.84□□□□□ -0.83
SHKBP1-224ENST00000600718 BIRC6Q9NR09 4857 aa9.84□□□□□ -0.84
SHKBP1-224ENST00000600718 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
SHKBP1-224ENST00000600718 H0Y9P7 68 aa9.81□□□□□ -0.84
SHKBP1-224ENST00000600718 NDUFS5O43920 106 aa9.8□□□□□ -0.84
SHKBP1-224ENST00000600718 A8MUN3 132 aa9.79□□□□□ -0.84
SHKBP1-224ENST00000600718 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
SHKBP1-224ENST00000600718 Q5VV11 94 aa9.78□□□□□ -0.84
SHKBP1-224ENST00000600718 Q8N9P0 234 aaPredicted RBP9.77□□□□□ -0.84
SHKBP1-224ENST00000600718 MYCBP2O75592 4640 aa9.72□□□□□ -0.85
SHKBP1-224ENST00000600718 HERC2O95714 4834 aa9.72□□□□□ -0.85
SHKBP1-224ENST00000600718 C9orf92A6NGG3 77 aa9.71□□□□□ -0.86
SHKBP1-224ENST00000600718 DMBT1Q9UGM3 2413 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-224ENST00000600718 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
SHKBP1-224ENST00000600718 J3QL48 77 aa9.69□□□□□ -0.86
SHKBP1-224ENST00000600718 CHKB-CPT1BH3BT56 60 aa9.67□□□□□ -0.86
SHKBP1-224ENST00000600718 LOC101927531A0A1B0GV80 90 aa9.65□□□□□ -0.86
SHKBP1-224ENST00000600718 Q75L30 129 aa9.65□□□□□ -0.86
SHKBP1-224ENST00000600718 PRR15LQ9BU68 103 aa9.65□□□□□ -0.86
SHKBP1-224ENST00000600718 COA5Q86WW8 74 aa9.64□□□□□ -0.87
SHKBP1-224ENST00000600718 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
SHKBP1-224ENST00000600718 Q5W150 140 aa9.63□□□□□ -0.87
SHKBP1-224ENST00000600718 A8MUU9 505 aa9.63□□□□□ -0.87
SHKBP1-224ENST00000600718 KTN1-AS1Q86SY8 53 aa9.62□□□□□ -0.87
SHKBP1-224ENST00000600718 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
SHKBP1-224ENST00000600718 A8MU10 97 aa9.61□□□□□ -0.87
SHKBP1-224ENST00000600718 ABCA13Q86UQ4 5058 aa9.58□□□□□ -0.88
SHKBP1-224ENST00000600718 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
SHKBP1-224ENST00000600718 RBM12B-AS1Q9P1G2 102 aa9.55□□□□□ -0.88
SHKBP1-224ENST00000600718 LCA10Q71F78 164 aa9.54□□□□□ -0.88
SHKBP1-224ENST00000600718 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
SHKBP1-224ENST00000600718 A6NED7 52 aa9.54□□□□□ -0.88
SHKBP1-224ENST00000600718 TPRXLQ17RH7 258 aa9.52□□□□□ -0.89
SHKBP1-224ENST00000600718 CDC42SE1Q9NRR8 79 aa9.52□□□□□ -0.89
SHKBP1-224ENST00000600718 PCOTHQ58A44 107 aa9.52□□□□□ -0.89
SHKBP1-224ENST00000600718 XP32Q5T750 250 aa9.51□□□□□ -0.89
SHKBP1-224ENST00000600718 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
SHKBP1-224ENST00000600718 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
SHKBP1-224ENST00000600718 A6NN06 94 aa9.46□□□□□ -0.89
SHKBP1-224ENST00000600718 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.89
SHKBP1-224ENST00000600718 HRES1P13985 223 aa9.42□□□□□ -0.9
SHKBP1-224ENST00000600718 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms