RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 IGHV6-1A0A0B4J1U7 121 aa9.14□□□□□ -0.95
USHBP1-210ENST00000600286 BPY2O14599 106 aa9.13□□□□□ -0.95
USHBP1-210ENST00000600286 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
USHBP1-210ENST00000600286 A0A1B0GVX0 72 aa9.12□□□□□ -0.95
USHBP1-210ENST00000600286 C8orf87E5RJ46 101 aa9.12□□□□□ -0.95
USHBP1-210ENST00000600286 ACYP1P07311 99 aa9.12□□□□□ -0.95
USHBP1-210ENST00000600286 Q6ZVQ6 151 aa9.12□□□□□ -0.95
USHBP1-210ENST00000600286 A8MWP4 228 aa9.11□□□□□ -0.95
USHBP1-210ENST00000600286 LINC00846Q9NV44 126 aa9.11□□□□□ -0.95
USHBP1-210ENST00000600286 DSCR10P59022 87 aa9.1□□□□□ -0.95
USHBP1-210ENST00000600286 J3QR89 54 aa9.05□□□□□ -0.96
USHBP1-210ENST00000600286 PRR15Q8IV56 129 aa9.05□□□□□ -0.96
USHBP1-210ENST00000600286 IGKV3D-7A0A0C4DH55 119 aa9.04□□□□□ -0.96
USHBP1-210ENST00000600286 FAM240AA0A1B0GVK7 77 aa9.04□□□□□ -0.96
USHBP1-210ENST00000600286 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
USHBP1-210ENST00000600286 RPL37P61927 97 aaKnown RBP9.03□□□□□ -0.96
USHBP1-210ENST00000600286 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.97
USHBP1-210ENST00000600286 Q75L30 129 aa9.02□□□□□ -0.97
USHBP1-210ENST00000600286 C8orf17Q9NRJ1 99 aa9.01□□□□□ -0.97
USHBP1-210ENST00000600286 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
USHBP1-210ENST00000600286 C20orf166-AS1Q96NR2 134 aa8.99□□□□□ -0.97
USHBP1-210ENST00000600286 K7EQZ3 153 aa8.98□□□□□ -0.97
USHBP1-210ENST00000600286 A8MUU9 505 aa8.97□□□□□ -0.97
USHBP1-210ENST00000600286 CXCL6P80162 114 aa8.97□□□□□ -0.97
USHBP1-210ENST00000600286 PCOTHQ58A44 107 aa8.97□□□□□ -0.97
USHBP1-210ENST00000600286 FAT4Q6V0I7 4981 aa8.96□□□□□ -0.97
USHBP1-210ENST00000600286 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
USHBP1-210ENST00000600286 hDV103S1A0JD37 113 aa8.93□□□□□ -0.98
USHBP1-210ENST00000600286 ATP5EP2Q5VTU8 51 aa8.92□□□□□ -0.98
USHBP1-210ENST00000600286 Q8N9L7 120 aa8.92□□□□□ -0.98
USHBP1-210ENST00000600286 TMEM254Q8TBM7 123 aa8.92□□□□□ -0.98
USHBP1-210ENST00000600286 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
USHBP1-210ENST00000600286 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
USHBP1-210ENST00000600286 MRPL34Q9BQ48 92 aaKnown RBP8.9□□□□□ -0.98
USHBP1-210ENST00000600286 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
USHBP1-210ENST00000600286 LINC00643Q86TS7 51 aa8.89□□□□□ -0.99
USHBP1-210ENST00000600286 A0A0U1RQV1 116 aa8.87□□□□□ -0.99
USHBP1-210ENST00000600286 K7ERU9 68 aa8.87□□□□□ -0.99
USHBP1-210ENST00000600286 NDUFS5O43920 106 aa8.87□□□□□ -0.99
USHBP1-210ENST00000600286 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
USHBP1-210ENST00000600286 WFDC13Q8IUB5 93 aa8.86□□□□□ -0.99
USHBP1-210ENST00000600286 HCG22E2RYF7 251 aa8.85□□□□□ -0.99
USHBP1-210ENST00000600286 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
USHBP1-210ENST00000600286 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
USHBP1-210ENST00000600286 KRTAP4-1Q9BYQ7 146 aa8.76□□□□□ -1.01
USHBP1-210ENST00000600286 KRTAP9-2Q9BYQ4 174 aa8.74□□□□□ -1.01
USHBP1-210ENST00000600286 TP53AIP1Q9HCN2 124 aa8.72□□□□□ -1.01
USHBP1-210ENST00000600286 SPINK7P58062 85 aa8.65□□□□□ -1.02
USHBP1-210ENST00000600286 A0A087WVE0 104 aa8.64□□□□□ -1.03
USHBP1-210ENST00000600286 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
USHBP1-210ENST00000600286 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
USHBP1-210ENST00000600286 RBM12B-AS1Q9P1G2 102 aa8.62□□□□□ -1.03
USHBP1-210ENST00000600286 Q5W150 140 aa8.61□□□□□ -1.03
USHBP1-210ENST00000600286 IGKV2D-30A0A075B6S6 120 aa8.59□□□□□ -1.03
USHBP1-210ENST00000600286 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
USHBP1-210ENST00000600286 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
USHBP1-210ENST00000600286 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
USHBP1-210ENST00000600286 UQCRQO14949 82 aa8.57□□□□□ -1.04
USHBP1-210ENST00000600286 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
USHBP1-210ENST00000600286 MT-ATP8P03928 68 aa8.56□□□□□ -1.04
USHBP1-210ENST00000600286 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
USHBP1-210ENST00000600286 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
USHBP1-210ENST00000600286 HRES1P13985 223 aa8.53□□□□□ -1.04
USHBP1-210ENST00000600286 KRTAP19-2Q3LHN2 52 aa8.51□□□□□ -1.05
USHBP1-210ENST00000600286 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
USHBP1-210ENST00000600286 ATOX1O00244 68 aa8.5□□□□□ -1.05
USHBP1-210ENST00000600286 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
USHBP1-210ENST00000600286 H0Y9P7 68 aa8.47□□□□□ -1.05
USHBP1-210ENST00000600286 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
USHBP1-210ENST00000600286 LOC101927531A0A1B0GV80 90 aa8.46□□□□□ -1.06
USHBP1-210ENST00000600286 MP68P56378 58 aa8.46□□□□□ -1.06
USHBP1-210ENST00000600286 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
USHBP1-210ENST00000600286 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
USHBP1-210ENST00000600286 OCR1Q9BZK8 76 aa8.44□□□□□ -1.06
USHBP1-210ENST00000600286 FAM236AA0A1B0GUQ0 79 aa8.42□□□□□ -1.06
USHBP1-210ENST00000600286 FAM236BA0A1B0GV22 79 aa8.42□□□□□ -1.06
USHBP1-210ENST00000600286 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
USHBP1-210ENST00000600286 M0R2T5 61 aa8.41□□□□□ -1.06
USHBP1-210ENST00000600286 C1orf64Q8NEQ6 169 aa8.39□□□□□ -1.07
USHBP1-210ENST00000600286 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
USHBP1-210ENST00000600286 LINC00208Q96KT6 92 aa8.38□□□□□ -1.07
USHBP1-210ENST00000600286 H3BPC8 53 aa8.37□□□□□ -1.07
USHBP1-210ENST00000600286 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
USHBP1-210ENST00000600286 MT1HP80294 61 aa8.36□□□□□ -1.07
USHBP1-210ENST00000600286 C4orf26Q17RF5 130 aa8.36□□□□□ -1.07
USHBP1-210ENST00000600286 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
USHBP1-210ENST00000600286 FSIP2Q5CZC0 6907 aa8.32□□□□□ -1.08
USHBP1-210ENST00000600286 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
USHBP1-210ENST00000600286 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
USHBP1-210ENST00000600286 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
USHBP1-210ENST00000600286 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.1
USHBP1-210ENST00000600286 KRTAP10-6P60371 365 aaPredicted RBP8.2□□□□□ -1.1
USHBP1-210ENST00000600286 KLKP1Q107X0 134 aa8.19□□□□□ -1.1
USHBP1-210ENST00000600286 A8MUN3 132 aa8.16□□□□□ -1.1
USHBP1-210ENST00000600286 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.1
USHBP1-210ENST00000600286 S4R3F8 94 aa8.14□□□□□ -1.11
USHBP1-210ENST00000600286 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
USHBP1-210ENST00000600286 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
USHBP1-210ENST00000600286 COX7CP15954 63 aa8.08□□□□□ -1.12
USHBP1-210ENST00000600286 CSAG1Q6PB30 78 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms