RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 SIGMAR1Q99720 223 aa9.53□□□□□ -0.88
IRF3-222ENST00000599144 MACF1Q9UPN3 7388 aaKnown RBP9.53□□□□□ -0.88
IRF3-222ENST00000599144 A0A1W2PPM0 123 aa9.52□□□□□ -0.89
IRF3-222ENST00000599144 FABP2P12104 132 aa9.52□□□□□ -0.89
IRF3-222ENST00000599144 NDUFV3P56181 108 aaKnown RBP9.51□□□□□ -0.89
IRF3-222ENST00000599144 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
IRF3-222ENST00000599144 TMEM256-PLSCR3K7ERE1 68 aa9.49□□□□□ -0.89
IRF3-222ENST00000599144 NOTCH2NLQ7Z3S9 236 aa9.49□□□□□ -0.89
IRF3-222ENST00000599144 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
IRF3-222ENST00000599144 LINC00313P59037 77 aa9.46□□□□□ -0.9
IRF3-222ENST00000599144 RBM12B-AS1Q9P1G2 102 aa9.46□□□□□ -0.9
IRF3-222ENST00000599144 H3BMG7 143 aa9.45□□□□□ -0.9
IRF3-222ENST00000599144 BAALC-AS2P0C853 105 aa9.44□□□□□ -0.9
IRF3-222ENST00000599144 IGKV4-1P06312 121 aa9.43□□□□□ -0.9
IRF3-222ENST00000599144 UBE2V1Q13404 147 aa9.43□□□□□ -0.9
IRF3-222ENST00000599144 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
IRF3-222ENST00000599144 SPCS1Q9Y6A9 102 aa9.43□□□□□ -0.9
IRF3-222ENST00000599144 A0A1B0GV72 72 aa9.42□□□□□ -0.9
IRF3-222ENST00000599144 C9JAW5 83 aa9.4□□□□□ -0.9
IRF3-222ENST00000599144 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.9
IRF3-222ENST00000599144 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
IRF3-222ENST00000599144 IGHV6-1A0A0B4J1U7 121 aa9.35□□□□□ -0.91
IRF3-222ENST00000599144 K7EP34 96 aa9.35□□□□□ -0.91
IRF3-222ENST00000599144 GTF2H5Q6ZYL4 71 aa9.35□□□□□ -0.91
IRF3-222ENST00000599144 H3BT86 120 aa9.34□□□□□ -0.91
IRF3-222ENST00000599144 RBM3P98179 157 aaKnown RBP9.34□□□□□ -0.91
IRF3-222ENST00000599144 JMJD7-PLA2G4BH0Y9G9 81 aa9.32□□□□□ -0.92
IRF3-222ENST00000599144 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
IRF3-222ENST00000599144 LINC00472Q9H8W2 130 aa9.3□□□□□ -0.92
IRF3-222ENST00000599144 MTURNQ8N3F0 131 aa9.29□□□□□ -0.92
IRF3-222ENST00000599144 TRBV7-4A0A0J9YYF1 115 aa9.27□□□□□ -0.93
IRF3-222ENST00000599144 LINC00846Q9NV44 126 aa9.26□□□□□ -0.93
IRF3-222ENST00000599144 CCKP06307 115 aa9.25□□□□□ -0.93
IRF3-222ENST00000599144 PDE6GP18545 87 aa9.25□□□□□ -0.93
IRF3-222ENST00000599144 SPINK7P58062 85 aa9.23□□□□□ -0.93
IRF3-222ENST00000599144 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
IRF3-222ENST00000599144 LOC110117498A0A087WWA1 95 aa9.22□□□□□ -0.93
IRF3-222ENST00000599144 F8W1H4 67 aa9.22□□□□□ -0.93
IRF3-222ENST00000599144 C21orf62-AS1Q17RA5 79 aa9.22□□□□□ -0.93
IRF3-222ENST00000599144 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
IRF3-222ENST00000599144 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
IRF3-222ENST00000599144 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.94
IRF3-222ENST00000599144 VPS25Q9BRG1 176 aa9.21□□□□□ -0.94
IRF3-222ENST00000599144 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.94
IRF3-222ENST00000599144 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
IRF3-222ENST00000599144 Q6ZQT0 140 aa9.19□□□□□ -0.94
IRF3-222ENST00000599144 KRTAP6-3Q3LI67 103 aa9.17□□□□□ -0.94
IRF3-222ENST00000599144 A0A1B0GW54 56 aa9.16□□□□□ -0.94
IRF3-222ENST00000599144 C8orf87E5RJ46 101 aa9.16□□□□□ -0.94
IRF3-222ENST00000599144 A0A1B0GV90 55 aa9.15□□□□□ -0.94
IRF3-222ENST00000599144 A8MWP4 228 aa9.15□□□□□ -0.94
IRF3-222ENST00000599144 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
IRF3-222ENST00000599144 ETDBQ3ZM63 59 aa9.09□□□□□ -0.95
IRF3-222ENST00000599144 NREPQ16612 68 aa9.02□□□□□ -0.97
IRF3-222ENST00000599144 NEBP20929 6669 aa9.02□□□□□ -0.97
IRF3-222ENST00000599144 J3KT08 172 aa9□□□□□ -0.97
IRF3-222ENST00000599144 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
IRF3-222ENST00000599144 NDUFB1O75438 58 aa8.94□□□□□ -0.98
IRF3-222ENST00000599144 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
IRF3-222ENST00000599144 IGKV3D-7A0A0C4DH55 119 aa8.92□□□□□ -0.98
IRF3-222ENST00000599144 H1FX-AS1Q4G0G2 97 aa8.92□□□□□ -0.98
IRF3-222ENST00000599144 Q6ZVQ6 151 aa8.91□□□□□ -0.98
IRF3-222ENST00000599144 ACYP1P07311 99 aa8.9□□□□□ -0.98
IRF3-222ENST00000599144 BPY2O14599 106 aa8.89□□□□□ -0.99
IRF3-222ENST00000599144 FAM240AA0A1B0GVK7 77 aa8.87□□□□□ -0.99
IRF3-222ENST00000599144 MUC12Q9UKN1 5478 aa8.87□□□□□ -0.99
IRF3-222ENST00000599144 J3QR89 54 aa8.84□□□□□ -0.99
IRF3-222ENST00000599144 PRR15Q8IV56 129 aa8.83□□□□□ -1
IRF3-222ENST00000599144 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
IRF3-222ENST00000599144 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
IRF3-222ENST00000599144 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
IRF3-222ENST00000599144 A6NN06 94 aa8.78□□□□□ -1
IRF3-222ENST00000599144 IGKV2-30P06310 120 aa8.78□□□□□ -1
IRF3-222ENST00000599144 K7EQZ3 153 aa8.77□□□□□ -1.01
IRF3-222ENST00000599144 NDUFS5O43920 106 aa8.76□□□□□ -1.01
IRF3-222ENST00000599144 MT1BP07438 61 aa8.76□□□□□ -1.01
IRF3-222ENST00000599144 CXCL6P80162 114 aa8.76□□□□□ -1.01
IRF3-222ENST00000599144 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
IRF3-222ENST00000599144 KRTAP20-1Q3LI63 56 aa8.74□□□□□ -1.01
IRF3-222ENST00000599144 ATP5EP2Q5VTU8 51 aa8.72□□□□□ -1.01
IRF3-222ENST00000599144 Q5W150 140 aa8.72□□□□□ -1.01
IRF3-222ENST00000599144 Q8N9L7 120 aa8.72□□□□□ -1.01
IRF3-222ENST00000599144 LINC00643Q86TS7 51 aa8.7□□□□□ -1.02
IRF3-222ENST00000599144 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
IRF3-222ENST00000599144 K7ERU9 68 aa8.69□□□□□ -1.02
IRF3-222ENST00000599144 C5orf47Q569G3 176 aa8.69□□□□□ -1.02
IRF3-222ENST00000599144 FAM236AA0A1B0GUQ0 79 aa8.68□□□□□ -1.02
IRF3-222ENST00000599144 FAM236BA0A1B0GV22 79 aa8.68□□□□□ -1.02
IRF3-222ENST00000599144 C4orf26Q17RF5 130 aa8.68□□□□□ -1.02
IRF3-222ENST00000599144 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
IRF3-222ENST00000599144 Q5VV11 94 aa8.65□□□□□ -1.02
IRF3-222ENST00000599144 CASC2Q6XLA1 102 aa8.65□□□□□ -1.02
IRF3-222ENST00000599144 HCG22E2RYF7 251 aa8.63□□□□□ -1.03
IRF3-222ENST00000599144 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
IRF3-222ENST00000599144 KRTAP19-8Q3LI54 63 aa8.6□□□□□ -1.03
IRF3-222ENST00000599144 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
IRF3-222ENST00000599144 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
IRF3-222ENST00000599144 KMT2DO14686 5537 aa8.55□□□□□ -1.04
IRF3-222ENST00000599144 KRTAP5-9P26371 169 aa8.55□□□□□ -1.04
IRF3-222ENST00000599144 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms