RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 LOC110117498A0A087WWA1 95 aa8.95□□□□□ -0.98
PNKP-210ENST00000597965 CCKP06307 115 aa8.95□□□□□ -0.98
PNKP-210ENST00000597965 Q6JHZ5 121 aa8.95□□□□□ -0.98
PNKP-210ENST00000597965 TRBV7-4A0A0J9YYF1 115 aa8.92□□□□□ -0.98
PNKP-210ENST00000597965 Q6ZQT0 140 aa8.92□□□□□ -0.98
PNKP-210ENST00000597965 PDE6GP18545 87 aa8.91□□□□□ -0.98
PNKP-210ENST00000597965 Q6Q795 121 aa8.91□□□□□ -0.98
PNKP-210ENST00000597965 Q75L30 129 aa8.91□□□□□ -0.98
PNKP-210ENST00000597965 DSCR8Q96T75 97 aa8.91□□□□□ -0.98
PNKP-210ENST00000597965 FLGP20930 4061 aaPredicted RBP8.9□□□□□ -0.98
PNKP-210ENST00000597965 TRBV7-7A0A0K0K1E9 115 aa8.89□□□□□ -0.99
PNKP-210ENST00000597965 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
PNKP-210ENST00000597965 C21orf62-AS1Q17RA5 79 aa8.85□□□□□ -0.99
PNKP-210ENST00000597965 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
PNKP-210ENST00000597965 MT-ATP8P03928 68 aa8.84□□□□□ -0.99
PNKP-210ENST00000597965 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
PNKP-210ENST00000597965 LINC00643Q86TS7 51 aa8.82□□□□□ -1
PNKP-210ENST00000597965 SS18L2Q9UHA2 77 aa8.8□□□□□ -1
PNKP-210ENST00000597965 Q96NJ1 140 aa8.79□□□□□ -1
PNKP-210ENST00000597965 A0A1W2PNM2 257 aa8.78□□□□□ -1
PNKP-210ENST00000597965 A0A1B0GW54 56 aa8.75□□□□□ -1.01
PNKP-210ENST00000597965 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
PNKP-210ENST00000597965 C20orf166-AS1Q96NR2 134 aa8.74□□□□□ -1.01
PNKP-210ENST00000597965 Q6ZVQ6 151 aa8.73□□□□□ -1.01
PNKP-210ENST00000597965 KRTAP9-7A8MTY7 169 aa8.71□□□□□ -1.02
PNKP-210ENST00000597965 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.71□□□□□ -1.02
PNKP-210ENST00000597965 A8MUU9 505 aa8.7□□□□□ -1.02
PNKP-210ENST00000597965 SCGB1A1P11684 91 aa8.7□□□□□ -1.02
PNKP-210ENST00000597965 IMUPQ9GZP8 106 aa8.7□□□□□ -1.02
PNKP-210ENST00000597965 IGKV3D-7A0A0C4DH55 119 aa8.69□□□□□ -1.02
PNKP-210ENST00000597965 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
PNKP-210ENST00000597965 ATP5EP2Q5VTU8 51 aa8.68□□□□□ -1.02
PNKP-210ENST00000597965 NREPQ16612 68 aa8.66□□□□□ -1.02
PNKP-210ENST00000597965 CXCL6P80162 114 aa8.62□□□□□ -1.03
PNKP-210ENST00000597965 A0A087WSZ3 146 aa8.61□□□□□ -1.03
PNKP-210ENST00000597965 FAM236DA0A1B0GTK5 79 aa8.61□□□□□ -1.03
PNKP-210ENST00000597965 FAM236CP0DP71 79 aa8.61□□□□□ -1.03
PNKP-210ENST00000597965 RBM12B-AS1Q9P1G2 102 aa8.59□□□□□ -1.03
PNKP-210ENST00000597965 BPY2O14599 106 aa8.57□□□□□ -1.04
PNKP-210ENST00000597965 DSCR10P59022 87 aa8.56□□□□□ -1.04
PNKP-210ENST00000597965 LINC00313P59037 77 aa8.56□□□□□ -1.04
PNKP-210ENST00000597965 PCP4P48539 62 aa8.55□□□□□ -1.04
PNKP-210ENST00000597965 HIST1H4AP62805 103 aaKnown RBP8.55□□□□□ -1.04
PNKP-210ENST00000597965 A0A087WVE0 104 aa8.54□□□□□ -1.04
PNKP-210ENST00000597965 USH2AO75445 5202 aa8.53□□□□□ -1.04
PNKP-210ENST00000597965 SSPOA2VEC9 5147 aa8.52□□□□□ -1.05
PNKP-210ENST00000597965 FAM236AA0A1B0GUQ0 79 aa8.52□□□□□ -1.05
PNKP-210ENST00000597965 FAM236BA0A1B0GV22 79 aa8.52□□□□□ -1.05
PNKP-210ENST00000597965 MT2AP02795 61 aa8.52□□□□□ -1.05
PNKP-210ENST00000597965 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
PNKP-210ENST00000597965 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
PNKP-210ENST00000597965 Q8N9L7 120 aa8.49□□□□□ -1.05
PNKP-210ENST00000597965 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
PNKP-210ENST00000597965 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
PNKP-210ENST00000597965 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.06
PNKP-210ENST00000597965 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
PNKP-210ENST00000597965 MT1FP04733 61 aa8.45□□□□□ -1.06
PNKP-210ENST00000597965 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
PNKP-210ENST00000597965 HRES1P13985 223 aa8.44□□□□□ -1.06
PNKP-210ENST00000597965 ANAPC13Q9BS18 74 aa8.44□□□□□ -1.06
PNKP-210ENST00000597965 J3KT08 172 aa8.43□□□□□ -1.06
PNKP-210ENST00000597965 K7EQZ3 153 aa8.43□□□□□ -1.06
PNKP-210ENST00000597965 LCE2BO14633 110 aa8.43□□□□□ -1.06
PNKP-210ENST00000597965 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
PNKP-210ENST00000597965 ATOX1O00244 68 aa8.42□□□□□ -1.06
PNKP-210ENST00000597965 A8MWP4 228 aa8.41□□□□□ -1.06
PNKP-210ENST00000597965 FCGBPQ9Y6R7 5405 aaPredicted RBP8.4□□□□□ -1.06
PNKP-210ENST00000597965 NOTCH2NLQ7Z3S9 236 aa8.4□□□□□ -1.06
PNKP-210ENST00000597965 IGHV6-1A0A0B4J1U7 121 aa8.39□□□□□ -1.07
PNKP-210ENST00000597965 PRR15Q8IV56 129 aa8.39□□□□□ -1.07
PNKP-210ENST00000597965 C8orf87E5RJ46 101 aa8.37□□□□□ -1.07
PNKP-210ENST00000597965 HCG22E2RYF7 251 aa8.33□□□□□ -1.08
PNKP-210ENST00000597965 NDUFB1O75438 58 aa8.33□□□□□ -1.08
PNKP-210ENST00000597965 SERP2Q8N6R1 65 aa8.33□□□□□ -1.08
PNKP-210ENST00000597965 COX7CP15954 63 aa8.31□□□□□ -1.08
PNKP-210ENST00000597965 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
PNKP-210ENST00000597965 TRAV7A0A075B6U4 112 aa8.3□□□□□ -1.08
PNKP-210ENST00000597965 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
PNKP-210ENST00000597965 CCDC179H3BU77 68 aa8.3□□□□□ -1.08
PNKP-210ENST00000597965 ZCCHC13Q8WW36 166 aaKnown RBP8.3□□□□□ -1.08
PNKP-210ENST00000597965 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
PNKP-210ENST00000597965 UQCRQO14949 82 aa8.28□□□□□ -1.08
PNKP-210ENST00000597965 SPINK7P58062 85 aa8.28□□□□□ -1.08
PNKP-210ENST00000597965 WFDC13Q8IUB5 93 aa8.28□□□□□ -1.08
PNKP-210ENST00000597965 OCR1Q9BZK8 76 aa8.28□□□□□ -1.08
PNKP-210ENST00000597965 CASC2Q6XLA1 102 aa8.27□□□□□ -1.09
PNKP-210ENST00000597965 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
PNKP-210ENST00000597965 MACF1Q9UPN3 7388 aaKnown RBP8.26□□□□□ -1.09
PNKP-210ENST00000597965 KRTAP19-6Q3LI70 58 aa8.25□□□□□ -1.09
PNKP-210ENST00000597965 hDV103S1A0JD37 113 aa8.22□□□□□ -1.09
PNKP-210ENST00000597965 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
PNKP-210ENST00000597965 TMEM254Q8TBM7 123 aa8.18□□□□□ -1.1
PNKP-210ENST00000597965 SYNE2Q8WXH0 6885 aaKnown RBP8.17□□□□□ -1.1
PNKP-210ENST00000597965 MRPL34Q9BQ48 92 aaKnown RBP8.16□□□□□ -1.1
PNKP-210ENST00000597965 C20orf197Q8N268 126 aa8.14□□□□□ -1.11
PNKP-210ENST00000597965 C5orf47Q569G3 176 aa8.12□□□□□ -1.11
PNKP-210ENST00000597965 CYSTM1Q9H1C7 97 aa8.12□□□□□ -1.11
PNKP-210ENST00000597965 KLKP1Q107X0 134 aa8.1□□□□□ -1.11
PNKP-210ENST00000597965 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
PNKP-210ENST00000597965 SNURFQ9Y675 71 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms