RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TRBV7-7A0A0K0K1E9 115 aa6.3□□□□□ -1.4
SOX2-OT-228ENST00000597828 CCKP06307 115 aa6.3□□□□□ -1.4
SOX2-OT-228ENST00000597828 MTURNQ8N3F0 131 aa6.3□□□□□ -1.4
SOX2-OT-228ENST00000597828 OBSCN-AS1Q96MR7 158 aa6.3□□□□□ -1.4
SOX2-OT-228ENST00000597828 SS18L2Q9UHA2 77 aa6.3□□□□□ -1.4
SOX2-OT-228ENST00000597828 Q6Q795 121 aa6.29□□□□□ -1.4
SOX2-OT-228ENST00000597828 F8W1H4 67 aa6.28□□□□□ -1.4
SOX2-OT-228ENST00000597828 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
SOX2-OT-228ENST00000597828 Q75L30 129 aa6.26□□□□□ -1.41
SOX2-OT-228ENST00000597828 A0A087WSZ3 146 aa6.25□□□□□ -1.41
SOX2-OT-228ENST00000597828 C14orf132Q9NPU4 83 aa6.25□□□□□ -1.41
SOX2-OT-228ENST00000597828 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
SOX2-OT-228ENST00000597828 ATP11AUNQ6ZP68 121 aa6.24□□□□□ -1.41
SOX2-OT-228ENST00000597828 LOC110117498A0A087WWA1 95 aa6.23□□□□□ -1.41
SOX2-OT-228ENST00000597828 A0A1B0GW54 56 aa6.23□□□□□ -1.41
SOX2-OT-228ENST00000597828 H3BS24 57 aa6.22□□□□□ -1.41
SOX2-OT-228ENST00000597828 Q6ZQT0 140 aa6.22□□□□□ -1.41
SOX2-OT-228ENST00000597828 Q96NJ1 140 aa6.22□□□□□ -1.41
SOX2-OT-228ENST00000597828 PRO0461Q9UI25 63 aa6.2□□□□□ -1.42
SOX2-OT-228ENST00000597828 A0A1B0GV90 55 aa6.19□□□□□ -1.42
SOX2-OT-228ENST00000597828 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
SOX2-OT-228ENST00000597828 NREPQ16612 68 aa6.18□□□□□ -1.42
SOX2-OT-228ENST00000597828 ETDBQ3ZM63 59 aa6.17□□□□□ -1.42
SOX2-OT-228ENST00000597828 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
SOX2-OT-228ENST00000597828 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
SOX2-OT-228ENST00000597828 A8MUU9 505 aa6.16□□□□□ -1.42
SOX2-OT-228ENST00000597828 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
SOX2-OT-228ENST00000597828 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
SOX2-OT-228ENST00000597828 USH2AO75445 5202 aa6.15□□□□□ -1.43
SOX2-OT-228ENST00000597828 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
SOX2-OT-228ENST00000597828 J3KT08 172 aa6.14□□□□□ -1.43
SOX2-OT-228ENST00000597828 DSCR10P59022 87 aa6.14□□□□□ -1.43
SOX2-OT-228ENST00000597828 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
SOX2-OT-228ENST00000597828 NDUFB1O75438 58 aa6.13□□□□□ -1.43
SOX2-OT-228ENST00000597828 DEFB116Q30KQ4 102 aa6.13□□□□□ -1.43
SOX2-OT-228ENST00000597828 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
SOX2-OT-228ENST00000597828 UBL5Q9BZL1 73 aa6.11□□□□□ -1.43
SOX2-OT-228ENST00000597828 LINC00472Q9H8W2 130 aa6.11□□□□□ -1.43
SOX2-OT-228ENST00000597828 MT2AP02795 61 aa6.09□□□□□ -1.43
SOX2-OT-228ENST00000597828 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
SOX2-OT-228ENST00000597828 LINC00313P59037 77 aa6.08□□□□□ -1.44
SOX2-OT-228ENST00000597828 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
SOX2-OT-228ENST00000597828 BPY2O14599 106 aa6.07□□□□□ -1.44
SOX2-OT-228ENST00000597828 ACYP1P07311 99 aa6.07□□□□□ -1.44
SOX2-OT-228ENST00000597828 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
SOX2-OT-228ENST00000597828 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
SOX2-OT-228ENST00000597828 J3QR89 54 aa6.06□□□□□ -1.44
SOX2-OT-228ENST00000597828 MT1FP04733 61 aa6.06□□□□□ -1.44
SOX2-OT-228ENST00000597828 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
SOX2-OT-228ENST00000597828 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
SOX2-OT-228ENST00000597828 C8orf87E5RJ46 101 aa6.04□□□□□ -1.44
SOX2-OT-228ENST00000597828 HRES1P13985 223 aa6.04□□□□□ -1.44
SOX2-OT-228ENST00000597828 Q6ZVQ6 151 aa6.04□□□□□ -1.44
SOX2-OT-228ENST00000597828 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
SOX2-OT-228ENST00000597828 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
SOX2-OT-228ENST00000597828 LINC00846Q9NV44 126 aa6.04□□□□□ -1.44
SOX2-OT-228ENST00000597828 A0A1B0GVX0 72 aa6.03□□□□□ -1.44
SOX2-OT-228ENST00000597828 A8MWP4 228 aa6.03□□□□□ -1.44
SOX2-OT-228ENST00000597828 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
SOX2-OT-228ENST00000597828 MPLKIPQ8TAP9 179 aa6.02□□□□□ -1.45
SOX2-OT-228ENST00000597828 FCGBPQ9Y6R7 5405 aaPredicted RBP6.01□□□□□ -1.45
SOX2-OT-228ENST00000597828 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
SOX2-OT-228ENST00000597828 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
SOX2-OT-228ENST00000597828 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
SOX2-OT-228ENST00000597828 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
SOX2-OT-228ENST00000597828 IGKV3D-7A0A0C4DH55 119 aa5.97□□□□□ -1.45
SOX2-OT-228ENST00000597828 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
SOX2-OT-228ENST00000597828 RBM12B-AS1Q9P1G2 102 aa5.97□□□□□ -1.45
SOX2-OT-228ENST00000597828 C8orf17Q9NRJ1 99 aa5.96□□□□□ -1.46
SOX2-OT-228ENST00000597828 CXCL6P80162 114 aa5.95□□□□□ -1.46
SOX2-OT-228ENST00000597828 K7EQZ3 153 aa5.94□□□□□ -1.46
SOX2-OT-228ENST00000597828 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
SOX2-OT-228ENST00000597828 K7ERU9 68 aa5.92□□□□□ -1.46
SOX2-OT-228ENST00000597828 NDUFS5O43920 106 aa5.92□□□□□ -1.46
SOX2-OT-228ENST00000597828 ATP5EP2Q5VTU8 51 aa5.91□□□□□ -1.46
SOX2-OT-228ENST00000597828 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
SOX2-OT-228ENST00000597828 Q8N9L7 120 aa5.91□□□□□ -1.46
SOX2-OT-228ENST00000597828 CASC2Q6XLA1 102 aa5.9□□□□□ -1.46
SOX2-OT-228ENST00000597828 TMEM254Q8TBM7 123 aa5.9□□□□□ -1.46
SOX2-OT-228ENST00000597828 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
SOX2-OT-228ENST00000597828 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-228ENST00000597828 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
SOX2-OT-228ENST00000597828 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
SOX2-OT-228ENST00000597828 HCG22E2RYF7 251 aa5.87□□□□□ -1.47
SOX2-OT-228ENST00000597828 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
SOX2-OT-228ENST00000597828 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
SOX2-OT-228ENST00000597828 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
SOX2-OT-228ENST00000597828 SPINK7P58062 85 aa5.85□□□□□ -1.47
SOX2-OT-228ENST00000597828 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
SOX2-OT-228ENST00000597828 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
SOX2-OT-228ENST00000597828 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
SOX2-OT-228ENST00000597828 SYNE2Q8WXH0 6885 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-228ENST00000597828 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
SOX2-OT-228ENST00000597828 SCGB1A1P11684 91 aa5.76□□□□□ -1.49
SOX2-OT-228ENST00000597828 A0A087WVE0 104 aa5.74□□□□□ -1.49
SOX2-OT-228ENST00000597828 IMUPQ9GZP8 106 aa5.74□□□□□ -1.49
SOX2-OT-228ENST00000597828 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
SOX2-OT-228ENST00000597828 UQCRQO14949 82 aa5.7□□□□□ -1.5
SOX2-OT-228ENST00000597828 IGKV2-30P06310 120 aa5.7□□□□□ -1.5
SOX2-OT-228ENST00000597828 MT-ATP8P03928 68 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms