RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
USE1-206ENST00000595101 TCL1BO95988 128 aa8.54□□□□□ -1.04
USE1-206ENST00000595101 BRK1Q8WUW1 75 aa8.54□□□□□ -1.04
USE1-206ENST00000595101 HIST1H4AP62805 103 aaKnown RBP8.53□□□□□ -1.04
USE1-206ENST00000595101 MUC17Q685J3 4493 aa8.53□□□□□ -1.04
USE1-206ENST00000595101 DSCR8Q96T75 97 aa8.52□□□□□ -1.05
USE1-206ENST00000595101 Q6JHZ5 121 aa8.51□□□□□ -1.05
USE1-206ENST00000595101 DNAL4O96015 105 aa8.47□□□□□ -1.05
USE1-206ENST00000595101 SERP2Q8N6R1 65 aa8.47□□□□□ -1.05
USE1-206ENST00000595101 C9orf92A6NGG3 77 aa8.45□□□□□ -1.06
USE1-206ENST00000595101 ATP5EP56381 51 aaPredicted RBP8.45□□□□□ -1.06
USE1-206ENST00000595101 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
USE1-206ENST00000595101 ORMDL1Q9P0S3 153 aa8.45□□□□□ -1.06
USE1-206ENST00000595101 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
USE1-206ENST00000595101 LST1O00453 97 aa8.45□□□□□ -1.06
USE1-206ENST00000595101 XP32Q5T750 250 aa8.44□□□□□ -1.06
USE1-206ENST00000595101 ATXN8Q156A1 80 aa8.43□□□□□ -1.06
USE1-206ENST00000595101 KTN1-AS1Q86SY8 53 aa8.42□□□□□ -1.06
USE1-206ENST00000595101 A0A1W2PNM2 257 aa8.4□□□□□ -1.07
USE1-206ENST00000595101 TMEM256-PLSCR3K7ERE1 68 aa8.4□□□□□ -1.07
USE1-206ENST00000595101 NDUFS5O43920 106 aa8.39□□□□□ -1.07
USE1-206ENST00000595101 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
USE1-206ENST00000595101 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
USE1-206ENST00000595101 A0A087WSZ3 146 aa8.38□□□□□ -1.07
USE1-206ENST00000595101 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
USE1-206ENST00000595101 H3BQ85 93 aa8.36□□□□□ -1.07
USE1-206ENST00000595101 BAALC-AS2P0C853 105 aa8.35□□□□□ -1.07
USE1-206ENST00000595101 FAT4Q6V0I7 4981 aa8.34□□□□□ -1.07
USE1-206ENST00000595101 Q96NJ1 140 aa8.32□□□□□ -1.08
USE1-206ENST00000595101 SEC61BP60468 96 aaKnown RBP8.31□□□□□ -1.08
USE1-206ENST00000595101 TRBV7-4A0A0J9YYF1 115 aa8.3□□□□□ -1.08
USE1-206ENST00000595101 CCKP06307 115 aa8.3□□□□□ -1.08
USE1-206ENST00000595101 CYSTM1Q9H1C7 97 aa8.3□□□□□ -1.08
USE1-206ENST00000595101 RBM3P98179 157 aaKnown RBP8.29□□□□□ -1.08
USE1-206ENST00000595101 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
USE1-206ENST00000595101 NDUFC1O43677 76 aa8.27□□□□□ -1.08
USE1-206ENST00000595101 OBSCN-AS1Q96MR7 158 aa8.27□□□□□ -1.09
USE1-206ENST00000595101 DEFB116Q30KQ4 102 aa8.25□□□□□ -1.09
USE1-206ENST00000595101 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
USE1-206ENST00000595101 Q6ZVQ6 151 aa8.22□□□□□ -1.09
USE1-206ENST00000595101 JMJD7-PLA2G4BH0Y9G9 81 aa8.21□□□□□ -1.1
USE1-206ENST00000595101 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
USE1-206ENST00000595101 LCA10Q71F78 164 aa8.2□□□□□ -1.1
USE1-206ENST00000595101 A0A0A0MQY5 61 aa8.19□□□□□ -1.1
USE1-206ENST00000595101 H7BZZ5 65 aa8.19□□□□□ -1.1
USE1-206ENST00000595101 IGKV4-1P06312 121 aa8.19□□□□□ -1.1
USE1-206ENST00000595101 KLKP1Q107X0 134 aa8.19□□□□□ -1.1
USE1-206ENST00000595101 Q6ZQT0 140 aa8.19□□□□□ -1.1
USE1-206ENST00000595101 C14orf132Q9NPU4 83 aa8.19□□□□□ -1.1
USE1-206ENST00000595101 DSCR10P59022 87 aa8.17□□□□□ -1.1
USE1-206ENST00000595101 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
USE1-206ENST00000595101 LOC110117498A0A087WWA1 95 aa8.15□□□□□ -1.1
USE1-206ENST00000595101 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.11
USE1-206ENST00000595101 Q75L30 129 aa8.13□□□□□ -1.11
USE1-206ENST00000595101 A8MUN3 132 aa8.12□□□□□ -1.11
USE1-206ENST00000595101 PDE6GP18545 87 aa8.12□□□□□ -1.11
USE1-206ENST00000595101 Q1T7F1 81 aa8.11□□□□□ -1.11
USE1-206ENST00000595101 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
USE1-206ENST00000595101 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
USE1-206ENST00000595101 IGHV6-1A0A0B4J1U7 121 aa8.1□□□□□ -1.11
USE1-206ENST00000595101 LINC00313P59037 77 aa8.1□□□□□ -1.11
USE1-206ENST00000595101 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
USE1-206ENST00000595101 A8MUU9 505 aa8.08□□□□□ -1.12
USE1-206ENST00000595101 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
USE1-206ENST00000595101 ATP5EP2Q5VTU8 51 aa8.08□□□□□ -1.12
USE1-206ENST00000595101 CXCL6P80162 114 aa8.07□□□□□ -1.12
USE1-206ENST00000595101 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
USE1-206ENST00000595101 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
USE1-206ENST00000595101 TRAV7A0A075B6U4 112 aa8.05□□□□□ -1.12
USE1-206ENST00000595101 A0A1B0GVX0 72 aa8.05□□□□□ -1.12
USE1-206ENST00000595101 A0A1B0GW54 56 aa8.02□□□□□ -1.13
USE1-206ENST00000595101 MP68P56378 58 aa8.02□□□□□ -1.13
USE1-206ENST00000595101 C20orf197Q8N268 126 aa8.01□□□□□ -1.13
USE1-206ENST00000595101 NREPQ16612 68 aa8□□□□□ -1.13
USE1-206ENST00000595101 IGKV3D-7A0A0C4DH55 119 aa7.98□□□□□ -1.13
USE1-206ENST00000595101 A6NN06 94 aa7.97□□□□□ -1.13
USE1-206ENST00000595101 A8MWP4 228 aa7.97□□□□□ -1.13
USE1-206ENST00000595101 NDUFB1O75438 58 aa7.94□□□□□ -1.14
USE1-206ENST00000595101 MT1HP80294 61 aa7.94□□□□□ -1.14
USE1-206ENST00000595101 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
USE1-206ENST00000595101 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
USE1-206ENST00000595101 LINC01554Q52M75 96 aa7.93□□□□□ -1.14
USE1-206ENST00000595101 PSPHP1O15172 72 aa7.92□□□□□ -1.14
USE1-206ENST00000595101 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
USE1-206ENST00000595101 K7EQZ3 153 aa7.9□□□□□ -1.14
USE1-206ENST00000595101 LINC00846Q9NV44 126 aa7.9□□□□□ -1.14
USE1-206ENST00000595101 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
USE1-206ENST00000595101 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
USE1-206ENST00000595101 UBL5Q9BZL1 73 aa7.88□□□□□ -1.15
USE1-206ENST00000595101 MMP24-AS1A0A0U1RRL7 71 aa7.87□□□□□ -1.15
USE1-206ENST00000595101 Q8N9L7 120 aa7.87□□□□□ -1.15
USE1-206ENST00000595101 BPY2O14599 106 aa7.86□□□□□ -1.15
USE1-206ENST00000595101 LCE2BO14633 110 aa7.86□□□□□ -1.15
USE1-206ENST00000595101 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
USE1-206ENST00000595101 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
USE1-206ENST00000595101 hDV103S1A0JD37 113 aa7.81□□□□□ -1.16
USE1-206ENST00000595101 HRES1P13985 223 aa7.8□□□□□ -1.16
USE1-206ENST00000595101 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
USE1-206ENST00000595101 A0A087WVE0 104 aa7.79□□□□□ -1.16
USE1-206ENST00000595101 TMEM254Q8TBM7 123 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms