RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.89
PNKP-204ENST00000594661 HYDINQ4G0P3 5121 aa9.46□□□□□ -0.9
PNKP-204ENST00000594661 CASC2Q6XLA1 102 aa9.45□□□□□ -0.9
PNKP-204ENST00000594661 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
PNKP-204ENST00000594661 SPAG11AQ6PDA7 123 aa9.44□□□□□ -0.9
PNKP-204ENST00000594661 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
PNKP-204ENST00000594661 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
PNKP-204ENST00000594661 PLA2G1BP04054 148 aaKnown RBP9.4□□□□□ -0.9
PNKP-204ENST00000594661 PRAC1Q96KF2 57 aa9.4□□□□□ -0.9
PNKP-204ENST00000594661 ASB16-AS1Q495Z4 193 aa9.4□□□□□ -0.91
PNKP-204ENST00000594661 IGLV5-52A0A0A0MRZ9 124 aa9.39□□□□□ -0.91
PNKP-204ENST00000594661 DNAH8Q96JB1 4490 aa9.39□□□□□ -0.91
PNKP-204ENST00000594661 RPL37AP61513 92 aaKnown RBP9.38□□□□□ -0.91
PNKP-204ENST00000594661 IGFL1Q6UW32 110 aa9.38□□□□□ -0.91
PNKP-204ENST00000594661 DNAH5Q8TE73 4624 aa9.38□□□□□ -0.91
PNKP-204ENST00000594661 H0Y9J4 135 aa9.36□□□□□ -0.91
PNKP-204ENST00000594661 FAT2Q9NYQ8 4349 aa9.36□□□□□ -0.91
PNKP-204ENST00000594661 IGLV8-61A0A075B6I0 122 aa9.35□□□□□ -0.91
PNKP-204ENST00000594661 A0A087WSZ3 146 aa9.35□□□□□ -0.91
PNKP-204ENST00000594661 A0A087X002 238 aa9.35□□□□□ -0.91
PNKP-204ENST00000594661 A0A0G2JQZ4 141 aa9.34□□□□□ -0.91
PNKP-204ENST00000594661 A8MWP4 228 aa9.33□□□□□ -0.92
PNKP-204ENST00000594661 SACSQ9NZJ4 4579 aa9.33□□□□□ -0.92
PNKP-204ENST00000594661 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
PNKP-204ENST00000594661 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
PNKP-204ENST00000594661 PKD1P98161 4303 aa9.32□□□□□ -0.92
PNKP-204ENST00000594661 HRES1P13985 223 aa9.31□□□□□ -0.92
PNKP-204ENST00000594661 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
PNKP-204ENST00000594661 PRR26Q8N8Z3 221 aa9.3□□□□□ -0.92
PNKP-204ENST00000594661 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
PNKP-204ENST00000594661 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
PNKP-204ENST00000594661 SPRR1BP22528 89 aa9.28□□□□□ -0.92
PNKP-204ENST00000594661 MMP24-AS1A0A0U1RRL7 71 aa9.27□□□□□ -0.93
PNKP-204ENST00000594661 LINC00472Q9H8W2 130 aa9.27□□□□□ -0.93
PNKP-204ENST00000594661 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
PNKP-204ENST00000594661 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
PNKP-204ENST00000594661 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
PNKP-204ENST00000594661 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
PNKP-204ENST00000594661 Q6ZSA8 131 aa9.16□□□□□ -0.94
PNKP-204ENST00000594661 IGLV9-49A0A0B4J1Y8 123 aa9.15□□□□□ -0.94
PNKP-204ENST00000594661 ZNF861PO60384 105 aa9.14□□□□□ -0.95
PNKP-204ENST00000594661 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
PNKP-204ENST00000594661 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
PNKP-204ENST00000594661 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
PNKP-204ENST00000594661 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
PNKP-204ENST00000594661 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
PNKP-204ENST00000594661 IGLV7-43P04211 117 aa9.11□□□□□ -0.95
PNKP-204ENST00000594661 RYR2Q92736 4967 aa9.11□□□□□ -0.95
PNKP-204ENST00000594661 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
PNKP-204ENST00000594661 ANAPC11Q9NYG5 84 aa9.08□□□□□ -0.96
PNKP-204ENST00000594661 KMT2CQ8NEZ4 4911 aaKnown RBP9.08□□□□□ -0.96
PNKP-204ENST00000594661 CSAG1Q6PB30 78 aa9.05□□□□□ -0.96
PNKP-204ENST00000594661 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
PNKP-204ENST00000594661 DYNC1H1Q14204 4646 aaKnown RBP9.04□□□□□ -0.96
PNKP-204ENST00000594661 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
PNKP-204ENST00000594661 Q96NJ1 140 aa9.02□□□□□ -0.96
PNKP-204ENST00000594661 ACYP2P14621 99 aa9.01□□□□□ -0.97
PNKP-204ENST00000594661 A0A1B0GVY2 172 aa9□□□□□ -0.97
PNKP-204ENST00000594661 A0A1B0GU69 56 aa8.99□□□□□ -0.97
PNKP-204ENST00000594661 MIR22HGQ0VDD5 57 aa8.99□□□□□ -0.97
PNKP-204ENST00000594661 MRPL34Q9BQ48 92 aaKnown RBP8.97□□□□□ -0.97
PNKP-204ENST00000594661 UQCR11O14957 56 aa8.96□□□□□ -0.98
PNKP-204ENST00000594661 A0A1B0GVX0 72 aa8.95□□□□□ -0.98
PNKP-204ENST00000594661 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
PNKP-204ENST00000594661 DMAC1Q96GE9 116 aa8.93□□□□□ -0.98
PNKP-204ENST00000594661 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
PNKP-204ENST00000594661 IGHV6-1A0A0B4J1U7 121 aa8.89□□□□□ -0.99
PNKP-204ENST00000594661 CDK2AP2O75956 126 aa8.87□□□□□ -0.99
PNKP-204ENST00000594661 KRTAP13-2Q52LG2 175 aa8.87□□□□□ -0.99
PNKP-204ENST00000594661 RYR3Q15413 4870 aa8.86□□□□□ -0.99
PNKP-204ENST00000594661 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
PNKP-204ENST00000594661 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
PNKP-204ENST00000594661 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
PNKP-204ENST00000594661 Q5W150 140 aa8.85□□□□□ -0.99
PNKP-204ENST00000594661 FAT1Q14517 4588 aa8.84□□□□□ -0.99
PNKP-204ENST00000594661 ROMO1P60602 79 aa8.83□□□□□ -1
PNKP-204ENST00000594661 SPINK6Q6UWN8 80 aa8.83□□□□□ -1
PNKP-204ENST00000594661 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
PNKP-204ENST00000594661 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
PNKP-204ENST00000594661 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
PNKP-204ENST00000594661 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
PNKP-204ENST00000594661 HSPG2P98160 4391 aa8.67□□□□□ -1.02
PNKP-204ENST00000594661 A8MUU9 505 aa8.66□□□□□ -1.02
PNKP-204ENST00000594661 PKHD1L1Q86WI1 4243 aa8.66□□□□□ -1.02
PNKP-204ENST00000594661 IGKV2-30P06310 120 aa8.63□□□□□ -1.03
PNKP-204ENST00000594661 RYR1P21817 5038 aa8.61□□□□□ -1.03
PNKP-204ENST00000594661 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
PNKP-204ENST00000594661 SPINK1P00995 79 aa8.6□□□□□ -1.03
PNKP-204ENST00000594661 LINC00304Q8N9R0 145 aa8.6□□□□□ -1.03
PNKP-204ENST00000594661 P0C880 135 aa8.59□□□□□ -1.03
PNKP-204ENST00000594661 Q5VSD8 79 aa8.54□□□□□ -1.04
PNKP-204ENST00000594661 EPPK1P58107 5090 aaKnown RBP8.54□□□□□ -1.04
PNKP-204ENST00000594661 RPS29P62273 56 aaKnown RBP8.52□□□□□ -1.05
PNKP-204ENST00000594661 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
PNKP-204ENST00000594661 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
PNKP-204ENST00000594661 H0YAA0 97 aa8.51□□□□□ -1.05
PNKP-204ENST00000594661 LRP1Q07954 4544 aaKnown RBP8.51□□□□□ -1.05
PNKP-204ENST00000594661 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
PNKP-204ENST00000594661 IGKV2D-30A0A075B6S6 120 aa8.48□□□□□ -1.05
PNKP-204ENST00000594661 TNXBP22105 4242 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms