RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
VRK3-205ENST00000593919 A0A087X002 238 aa7.82□□□□□ -1.16
VRK3-205ENST00000593919 OCR1Q9BZK8 76 aa7.82□□□□□ -1.16
VRK3-205ENST00000593919 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
VRK3-205ENST00000593919 KLKP1Q107X0 134 aa7.81□□□□□ -1.16
VRK3-205ENST00000593919 Q5VSD8 79 aa7.81□□□□□ -1.16
VRK3-205ENST00000593919 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
VRK3-205ENST00000593919 KRTAP13-2Q52LG2 175 aa7.79□□□□□ -1.16
VRK3-205ENST00000593919 HCG22E2RYF7 251 aa7.79□□□□□ -1.16
VRK3-205ENST00000593919 TMEM254Q8TBM7 123 aa7.79□□□□□ -1.16
VRK3-205ENST00000593919 KRTAP17-1Q9BYP8 105 aa7.79□□□□□ -1.16
VRK3-205ENST00000593919 C1orf195Q5TG92 126 aa7.78□□□□□ -1.16
VRK3-205ENST00000593919 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
VRK3-205ENST00000593919 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
VRK3-205ENST00000593919 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
VRK3-205ENST00000593919 SSBP3-AS1Q7Z2R9 100 aa7.75□□□□□ -1.17
VRK3-205ENST00000593919 SMIM26A0A096LP01 95 aa7.74□□□□□ -1.17
VRK3-205ENST00000593919 Q8N1X5 172 aa7.73□□□□□ -1.17
VRK3-205ENST00000593919 A0A0U1RQV1 116 aa7.73□□□□□ -1.17
VRK3-205ENST00000593919 A8MWP4 228 aa7.71□□□□□ -1.17
VRK3-205ENST00000593919 NDUFC1O43677 76 aa7.71□□□□□ -1.17
VRK3-205ENST00000593919 PRR15Q8IV56 129 aa7.71□□□□□ -1.17
VRK3-205ENST00000593919 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.18
VRK3-205ENST00000593919 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
VRK3-205ENST00000593919 LRP1Q07954 4544 aaKnown RBP7.69□□□□□ -1.18
VRK3-205ENST00000593919 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
VRK3-205ENST00000593919 Q96NJ1 140 aa7.68□□□□□ -1.18
VRK3-205ENST00000593919 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
VRK3-205ENST00000593919 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
VRK3-205ENST00000593919 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
VRK3-205ENST00000593919 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
VRK3-205ENST00000593919 NDUFB1O75438 58 aa7.65□□□□□ -1.18
VRK3-205ENST00000593919 TNXBP22105 4242 aa7.64□□□□□ -1.19
VRK3-205ENST00000593919 FAT3Q8TDW7 4589 aa7.63□□□□□ -1.19
VRK3-205ENST00000593919 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
VRK3-205ENST00000593919 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
VRK3-205ENST00000593919 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
VRK3-205ENST00000593919 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
VRK3-205ENST00000593919 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
VRK3-205ENST00000593919 IGHV6-1A0A0B4J1U7 121 aa7.59□□□□□ -1.2
VRK3-205ENST00000593919 SPINK1P00995 79 aa7.59□□□□□ -1.2
VRK3-205ENST00000593919 MP68P56378 58 aa7.58□□□□□ -1.2
VRK3-205ENST00000593919 A0A1B0GVX0 72 aa7.57□□□□□ -1.2
VRK3-205ENST00000593919 H0Y9P7 68 aa7.57□□□□□ -1.2
VRK3-205ENST00000593919 BRK1Q8WUW1 75 aa7.57□□□□□ -1.2
VRK3-205ENST00000593919 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
VRK3-205ENST00000593919 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
VRK3-205ENST00000593919 SPAG11AQ6PDA7 123 aa7.57□□□□□ -1.2
VRK3-205ENST00000593919 LIMD2Q9BT23 127 aa7.57□□□□□ -1.2
VRK3-205ENST00000593919 ASB16-AS1Q495Z4 193 aa7.56□□□□□ -1.2
VRK3-205ENST00000593919 LINC00208Q96KT6 92 aa7.56□□□□□ -1.2
VRK3-205ENST00000593919 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
VRK3-205ENST00000593919 HERC2O95714 4834 aa7.55□□□□□ -1.2
VRK3-205ENST00000593919 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
VRK3-205ENST00000593919 MPLKIPQ8TAP9 179 aa7.54□□□□□ -1.2
VRK3-205ENST00000593919 DMBT1Q9UGM3 2413 aaPredicted RBP7.54□□□□□ -1.2
VRK3-205ENST00000593919 PMAIP1Q13794 54 aa7.53□□□□□ -1.2
VRK3-205ENST00000593919 TRAV22A0A0B4J277 110 aa7.51□□□□□ -1.21
VRK3-205ENST00000593919 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
VRK3-205ENST00000593919 NDUFS5O43920 106 aa7.51□□□□□ -1.21
VRK3-205ENST00000593919 NOTCH2NLQ7Z3S9 236 aa7.51□□□□□ -1.21
VRK3-205ENST00000593919 H3BPC8 53 aa7.5□□□□□ -1.21
VRK3-205ENST00000593919 MT1HL1P0DM35 61 aa7.5□□□□□ -1.21
VRK3-205ENST00000593919 PRR4Q16378 134 aa7.5□□□□□ -1.21
VRK3-205ENST00000593919 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
VRK3-205ENST00000593919 MRPL34Q9BQ48 92 aaKnown RBP7.48□□□□□ -1.21
VRK3-205ENST00000593919 TP53AIP1Q9HCN2 124 aa7.48□□□□□ -1.21
VRK3-205ENST00000593919 RETNLBQ9BQ08 111 aa7.42□□□□□ -1.22
VRK3-205ENST00000593919 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
VRK3-205ENST00000593919 CYP4F30PQ9H0H9 118 aa7.42□□□□□ -1.22
VRK3-205ENST00000593919 Q1T7F1 81 aa7.41□□□□□ -1.22
VRK3-205ENST00000593919 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
VRK3-205ENST00000593919 PCOTHQ58A44 107 aa7.39□□□□□ -1.23
VRK3-205ENST00000593919 SPANXA2-OT1Q8N9U9 137 aa7.39□□□□□ -1.23
VRK3-205ENST00000593919 LINC00313P59037 77 aa7.37□□□□□ -1.23
VRK3-205ENST00000593919 Q5W150 140 aa7.34□□□□□ -1.23
VRK3-205ENST00000593919 IGLV7-46A0A075B6I9 117 aa7.31□□□□□ -1.24
VRK3-205ENST00000593919 PCLOQ9Y6V0 5065 aa7.31□□□□□ -1.24
VRK3-205ENST00000593919 PSPHP1O15172 72 aa7.31□□□□□ -1.24
VRK3-205ENST00000593919 KRTAP13-3Q3SY46 172 aa7.3□□□□□ -1.24
VRK3-205ENST00000593919 LOC101927531A0A1B0GV80 90 aa7.29□□□□□ -1.24
VRK3-205ENST00000593919 KRTAP16-1A8MUX0 517 aa7.29□□□□□ -1.24
VRK3-205ENST00000593919 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
VRK3-205ENST00000593919 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
VRK3-205ENST00000593919 A8MUN3 132 aa7.26□□□□□ -1.25
VRK3-205ENST00000593919 COA5Q86WW8 74 aa7.25□□□□□ -1.25
VRK3-205ENST00000593919 Q5VV11 94 aa7.24□□□□□ -1.25
VRK3-205ENST00000593919 A8MU10 97 aa7.23□□□□□ -1.25
VRK3-205ENST00000593919 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
VRK3-205ENST00000593919 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
VRK3-205ENST00000593919 HRES1P13985 223 aa7.17□□□□□ -1.26
VRK3-205ENST00000593919 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
VRK3-205ENST00000593919 A8MUU9 505 aa7.15□□□□□ -1.27
VRK3-205ENST00000593919 LPAP08519 4548 aa7.14□□□□□ -1.27
VRK3-205ENST00000593919 HERC1Q15751 4861 aa7.14□□□□□ -1.27
VRK3-205ENST00000593919 IGKV2D-30A0A075B6S6 120 aa7.13□□□□□ -1.27
VRK3-205ENST00000593919 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
VRK3-205ENST00000593919 CHKB-CPT1BH3BT56 60 aa7.13□□□□□ -1.27
VRK3-205ENST00000593919 XP32Q5T750 250 aa7.13□□□□□ -1.27
VRK3-205ENST00000593919 PRR15LQ9BU68 103 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms