RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 CCKP06307 115 aa8.34□□□□□ -1.07
DDX39A-216ENST00000591275 Q5XG85 94 aa8.34□□□□□ -1.07
DDX39A-216ENST00000591275 SCGB1A1P11684 91 aa8.33□□□□□ -1.08
DDX39A-216ENST00000591275 SSPOA2VEC9 5147 aa8.32□□□□□ -1.08
DDX39A-216ENST00000591275 SMIM29Q86T20 159 aa8.32□□□□□ -1.08
DDX39A-216ENST00000591275 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
DDX39A-216ENST00000591275 NDUFV3P56181 108 aaKnown RBP8.3□□□□□ -1.08
DDX39A-216ENST00000591275 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
DDX39A-216ENST00000591275 USH2AO75445 5202 aa8.3□□□□□ -1.08
DDX39A-216ENST00000591275 A0A1B0GW54 56 aa8.29□□□□□ -1.08
DDX39A-216ENST00000591275 LINC00643Q86TS7 51 aa8.29□□□□□ -1.08
DDX39A-216ENST00000591275 DSCR8Q96T75 97 aa8.29□□□□□ -1.08
DDX39A-216ENST00000591275 IMUPQ9GZP8 106 aa8.28□□□□□ -1.08
DDX39A-216ENST00000591275 TRBV7-4A0A0J9YYF1 115 aa8.27□□□□□ -1.09
DDX39A-216ENST00000591275 Q6ZQT0 140 aa8.27□□□□□ -1.09
DDX39A-216ENST00000591275 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
DDX39A-216ENST00000591275 MT-ATP8P03928 68 aa8.23□□□□□ -1.09
DDX39A-216ENST00000591275 TRBV7-7A0A0K0K1E9 115 aa8.22□□□□□ -1.09
DDX39A-216ENST00000591275 ATP11AUNQ6ZP68 121 aa8.21□□□□□ -1.1
DDX39A-216ENST00000591275 FCGBPQ9Y6R7 5405 aaPredicted RBP8.21□□□□□ -1.1
DDX39A-216ENST00000591275 LINC00846Q9NV44 126 aa8.2□□□□□ -1.1
DDX39A-216ENST00000591275 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
DDX39A-216ENST00000591275 Q6JHZ5 121 aa8.18□□□□□ -1.1
DDX39A-216ENST00000591275 UBL5Q9BZL1 73 aa8.18□□□□□ -1.1
DDX39A-216ENST00000591275 Q75L30 129 aa8.16□□□□□ -1.1
DDX39A-216ENST00000591275 PCP4P48539 62 aa8.15□□□□□ -1.1
DDX39A-216ENST00000591275 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
DDX39A-216ENST00000591275 F8WEM9 126 aa8.13□□□□□ -1.11
DDX39A-216ENST00000591275 A0A1B0GV72 72 aa8.1□□□□□ -1.11
DDX39A-216ENST00000591275 MT2AP02795 61 aa8.1□□□□□ -1.11
DDX39A-216ENST00000591275 LCE2BO14633 110 aa8.09□□□□□ -1.11
DDX39A-216ENST00000591275 CXCL6P80162 114 aa8.09□□□□□ -1.11
DDX39A-216ENST00000591275 Q6ZVQ6 151 aa8.08□□□□□ -1.12
DDX39A-216ENST00000591275 Q96NJ1 140 aa8.08□□□□□ -1.12
DDX39A-216ENST00000591275 A0A1W2PNM2 257 aa8.06□□□□□ -1.12
DDX39A-216ENST00000591275 MT1FP04733 61 aa8.05□□□□□ -1.12
DDX39A-216ENST00000591275 NREPQ16612 68 aa8.05□□□□□ -1.12
DDX39A-216ENST00000591275 IGFL1Q6UW32 110 aa8.05□□□□□ -1.12
DDX39A-216ENST00000591275 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
DDX39A-216ENST00000591275 MACF1Q9UPN3 7388 aaKnown RBP8.03□□□□□ -1.12
DDX39A-216ENST00000591275 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
DDX39A-216ENST00000591275 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
DDX39A-216ENST00000591275 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
DDX39A-216ENST00000591275 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
DDX39A-216ENST00000591275 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
DDX39A-216ENST00000591275 A8MUU9 505 aa7.98□□□□□ -1.13
DDX39A-216ENST00000591275 FAM236DA0A1B0GTK5 79 aa7.97□□□□□ -1.13
DDX39A-216ENST00000591275 FAM236CP0DP71 79 aa7.97□□□□□ -1.13
DDX39A-216ENST00000591275 ATOX1O00244 68 aa7.96□□□□□ -1.14
DDX39A-216ENST00000591275 ANAPC13Q9BS18 74 aa7.96□□□□□ -1.14
DDX39A-216ENST00000591275 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
DDX39A-216ENST00000591275 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
DDX39A-216ENST00000591275 BPY2O14599 106 aa7.95□□□□□ -1.14
DDX39A-216ENST00000591275 SMIM20Q8N5G0 67 aa7.91□□□□□ -1.14
DDX39A-216ENST00000591275 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.14
DDX39A-216ENST00000591275 DSCR10P59022 87 aa7.89□□□□□ -1.15
DDX39A-216ENST00000591275 A0A087WSZ3 146 aa7.88□□□□□ -1.15
DDX39A-216ENST00000591275 J3KT08 172 aa7.88□□□□□ -1.15
DDX39A-216ENST00000591275 SS18L2Q9UHA2 77 aa7.88□□□□□ -1.15
DDX39A-216ENST00000591275 A0A087WVE0 104 aa7.87□□□□□ -1.15
DDX39A-216ENST00000591275 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
DDX39A-216ENST00000591275 IGKV4-1P06312 121 aa7.86□□□□□ -1.15
DDX39A-216ENST00000591275 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
DDX39A-216ENST00000591275 UQCRQO14949 82 aa7.85□□□□□ -1.15
DDX39A-216ENST00000591275 SERP2Q8N6R1 65 aa7.85□□□□□ -1.15
DDX39A-216ENST00000591275 HRES1P13985 223 aa7.84□□□□□ -1.15
DDX39A-216ENST00000591275 COX7CP15954 63 aa7.84□□□□□ -1.15
DDX39A-216ENST00000591275 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
DDX39A-216ENST00000591275 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
DDX39A-216ENST00000591275 TRAV7A0A075B6U4 112 aa7.81□□□□□ -1.16
DDX39A-216ENST00000591275 A8MWP4 228 aa7.79□□□□□ -1.16
DDX39A-216ENST00000591275 NDUFB1O75438 58 aa7.77□□□□□ -1.17
DDX39A-216ENST00000591275 LINC00313P59037 77 aa7.77□□□□□ -1.17
DDX39A-216ENST00000591275 NOTCH2NLQ7Z3S9 236 aa7.77□□□□□ -1.17
DDX39A-216ENST00000591275 PRR15Q8IV56 129 aa7.77□□□□□ -1.17
DDX39A-216ENST00000591275 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
DDX39A-216ENST00000591275 K7EQZ3 153 aa7.75□□□□□ -1.17
DDX39A-216ENST00000591275 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
DDX39A-216ENST00000591275 Q8N9L7 120 aa7.75□□□□□ -1.17
DDX39A-216ENST00000591275 HCG22E2RYF7 251 aa7.74□□□□□ -1.17
DDX39A-216ENST00000591275 OCR1Q9BZK8 76 aa7.72□□□□□ -1.17
DDX39A-216ENST00000591275 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
DDX39A-216ENST00000591275 KLKP1Q107X0 134 aa7.66□□□□□ -1.18
DDX39A-216ENST00000591275 C5orf47Q569G3 176 aa7.66□□□□□ -1.18
DDX39A-216ENST00000591275 A0A1B0GVX0 72 aa7.65□□□□□ -1.18
DDX39A-216ENST00000591275 CASC2Q6XLA1 102 aa7.65□□□□□ -1.18
DDX39A-216ENST00000591275 Q8N9P0 234 aaPredicted RBP7.65□□□□□ -1.18
DDX39A-216ENST00000591275 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
DDX39A-216ENST00000591275 NDUFC1O43677 76 aa7.63□□□□□ -1.19
DDX39A-216ENST00000591275 MMP24-AS1A0A0U1RRL7 71 aa7.62□□□□□ -1.19
DDX39A-216ENST00000591275 C8orf87E5RJ46 101 aa7.62□□□□□ -1.19
DDX39A-216ENST00000591275 hDV103S1A0JD37 113 aa7.61□□□□□ -1.19
DDX39A-216ENST00000591275 TP53AIP1Q9HCN2 124 aa7.61□□□□□ -1.19
DDX39A-216ENST00000591275 C8orf17Q9NRJ1 99 aa7.61□□□□□ -1.19
DDX39A-216ENST00000591275 H3BPC8 53 aa7.59□□□□□ -1.19
DDX39A-216ENST00000591275 SPINK7P58062 85 aa7.59□□□□□ -1.19
DDX39A-216ENST00000591275 WFDC13Q8IUB5 93 aa7.59□□□□□ -1.19
DDX39A-216ENST00000591275 C20orf197Q8N268 126 aa7.59□□□□□ -1.19
DDX39A-216ENST00000591275 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
DDX39A-216ENST00000591275 NEBP20929 6669 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms