RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 A0A087X002 238 aa9.73□□□□□ -0.85
APBA3-205ENST00000590064 NOTCH2NLQ7Z3S9 236 aa9.73□□□□□ -0.85
APBA3-205ENST00000590064 SSBP3-AS1Q7Z2R9 100 aa9.72□□□□□ -0.85
APBA3-205ENST00000590064 WWC2-AS2Q96NR7 200 aa9.71□□□□□ -0.86
APBA3-205ENST00000590064 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
APBA3-205ENST00000590064 A6NN06 94 aa9.7□□□□□ -0.86
APBA3-205ENST00000590064 Q96NJ1 140 aa9.7□□□□□ -0.86
APBA3-205ENST00000590064 FBN1P35555 2871 aaKnown RBP9.66□□□□□ -0.86
APBA3-205ENST00000590064 Q5W150 140 aa9.65□□□□□ -0.86
APBA3-205ENST00000590064 TENM4Q6N022 2769 aa9.65□□□□□ -0.87
APBA3-205ENST00000590064 OTOGQ6ZRI0 2925 aa9.64□□□□□ -0.87
APBA3-205ENST00000590064 NBPF19A0A087WUL8 3843 aa9.63□□□□□ -0.87
APBA3-205ENST00000590064 Q8N1X5 172 aa9.63□□□□□ -0.87
APBA3-205ENST00000590064 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
APBA3-205ENST00000590064 TYMSOSQ8TAI1 123 aa9.59□□□□□ -0.87
APBA3-205ENST00000590064 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
APBA3-205ENST00000590064 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
APBA3-205ENST00000590064 DMAC1Q96GE9 116 aa9.54□□□□□ -0.88
APBA3-205ENST00000590064 SRRM2Q9UQ35 2752 aaKnown RBP9.54□□□□□ -0.88
APBA3-205ENST00000590064 PLAC8Q9NZF1 115 aa9.53□□□□□ -0.88
APBA3-205ENST00000590064 ADM2Q7Z4H4 148 aa9.53□□□□□ -0.88
APBA3-205ENST00000590064 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
APBA3-205ENST00000590064 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
APBA3-205ENST00000590064 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
APBA3-205ENST00000590064 TRRAPQ9Y4A5 3859 aa9.45□□□□□ -0.9
APBA3-205ENST00000590064 TENM2Q9NT68 2774 aa9.43□□□□□ -0.9
APBA3-205ENST00000590064 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
APBA3-205ENST00000590064 FLG2Q5D862 2391 aaPredicted RBP9.41□□□□□ -0.9
APBA3-205ENST00000590064 Q6ZRN7 208 aaPredicted RBP9.4□□□□□ -0.9
APBA3-205ENST00000590064 ZNF469Q96JG9 3925 aaPredicted RBP9.4□□□□□ -0.91
APBA3-205ENST00000590064 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
APBA3-205ENST00000590064 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
APBA3-205ENST00000590064 H3BS24 57 aa9.39□□□□□ -0.91
APBA3-205ENST00000590064 LINC00304Q8N9R0 145 aa9.36□□□□□ -0.91
APBA3-205ENST00000590064 A0A1B0GU33 70 aa9.33□□□□□ -0.92
APBA3-205ENST00000590064 ANK3Q12955 4377 aaKnown RBP9.32□□□□□ -0.92
APBA3-205ENST00000590064 TGP01266 2768 aa9.29□□□□□ -0.92
APBA3-205ENST00000590064 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
APBA3-205ENST00000590064 SPINT4Q6UDR6 99 aa9.27□□□□□ -0.93
APBA3-205ENST00000590064 SMR3BP02814 79 aaPredicted RBP9.26□□□□□ -0.93
APBA3-205ENST00000590064 KRTAP10-2P60368 255 aa9.24□□□□□ -0.93
APBA3-205ENST00000590064 AKAP9Q99996 3911 aa9.23□□□□□ -0.93
APBA3-205ENST00000590064 A0A0D9SG42 100 aa9.22□□□□□ -0.93
APBA3-205ENST00000590064 KRTAP13-2Q52LG2 175 aa9.18□□□□□ -0.94
APBA3-205ENST00000590064 COL7A1Q02388 2944 aa9.17□□□□□ -0.94
APBA3-205ENST00000590064 KRTAP10-1P60331 282 aa9.15□□□□□ -0.94
APBA3-205ENST00000590064 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
APBA3-205ENST00000590064 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
APBA3-205ENST00000590064 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
APBA3-205ENST00000590064 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
APBA3-205ENST00000590064 CSMD3Q7Z407 3707 aa9□□□□□ -0.97
APBA3-205ENST00000590064 Q6ZSA8 131 aa8.96□□□□□ -0.98
APBA3-205ENST00000590064 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
APBA3-205ENST00000590064 RPL37P61927 97 aaKnown RBP8.91□□□□□ -0.98
APBA3-205ENST00000590064 ROMO1P60602 79 aa8.91□□□□□ -0.98
APBA3-205ENST00000590064 H0YAA0 97 aa8.89□□□□□ -0.99
APBA3-205ENST00000590064 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
APBA3-205ENST00000590064 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
APBA3-205ENST00000590064 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
APBA3-205ENST00000590064 A8MUU9 505 aa8.85□□□□□ -0.99
APBA3-205ENST00000590064 S4R3F8 94 aa8.77□□□□□ -1.01
APBA3-205ENST00000590064 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.02
APBA3-205ENST00000590064 C20orf166-AS1Q96NR2 134 aa8.68□□□□□ -1.02
APBA3-205ENST00000590064 HUWE1Q7Z6Z7 4374 aaKnown RBP8.64□□□□□ -1.03
APBA3-205ENST00000590064 DNAH10Q8IVF4 4471 aa8.62□□□□□ -1.03
APBA3-205ENST00000590064 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
APBA3-205ENST00000590064 NDUFAF8A1L188 74 aa8.58□□□□□ -1.04
APBA3-205ENST00000590064 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
APBA3-205ENST00000590064 R4GN34 69 aa8.45□□□□□ -1.06
APBA3-205ENST00000590064 M0QZ58 72 aa8.43□□□□□ -1.06
APBA3-205ENST00000590064 Q5VSD8 79 aa8.4□□□□□ -1.06
APBA3-205ENST00000590064 P0C880 135 aa8.38□□□□□ -1.07
APBA3-205ENST00000590064 LUZP6Q538Z0 58 aa8.38□□□□□ -1.07
APBA3-205ENST00000590064 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
APBA3-205ENST00000590064 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
APBA3-205ENST00000590064 ANK2Q01484 3957 aa8.31□□□□□ -1.08
APBA3-205ENST00000590064 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
APBA3-205ENST00000590064 DNAH9Q9NYC9 4486 aa8.27□□□□□ -1.09
APBA3-205ENST00000590064 XP32Q5T750 250 aa8.26□□□□□ -1.09
APBA3-205ENST00000590064 KRTAP13-4Q3LI77 160 aa8.24□□□□□ -1.09
APBA3-205ENST00000590064 DNAH1Q9P2D7 4330 aa8.23□□□□□ -1.09
APBA3-205ENST00000590064 DNAH8Q96JB1 4490 aa8.2□□□□□ -1.1
APBA3-205ENST00000590064 KRTAP10-6P60371 365 aaPredicted RBP8.2□□□□□ -1.1
APBA3-205ENST00000590064 J3QL48 77 aa8.2□□□□□ -1.1
APBA3-205ENST00000590064 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
APBA3-205ENST00000590064 LYSTQ99698 3801 aa8.16□□□□□ -1.1
APBA3-205ENST00000590064 DNAH11Q96DT5 4516 aa8.14□□□□□ -1.11
APBA3-205ENST00000590064 KRTAP10-8P60410 259 aa8.12□□□□□ -1.11
APBA3-205ENST00000590064 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
APBA3-205ENST00000590064 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
APBA3-205ENST00000590064 ALMS1Q8TCU4 4167 aa8.06□□□□□ -1.12
APBA3-205ENST00000590064 STARD9Q9P2P6 4700 aa8.05□□□□□ -1.12
APBA3-205ENST00000590064 DNAH17Q9UFH2 4485 aa8.04□□□□□ -1.12
APBA3-205ENST00000590064 VPS13DQ5THJ4 4388 aa8.04□□□□□ -1.12
APBA3-205ENST00000590064 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
APBA3-205ENST00000590064 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
APBA3-205ENST00000590064 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.12
APBA3-205ENST00000590064 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
APBA3-205ENST00000590064 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
APBA3-205ENST00000590064 LRP1BQ9NZR2 4599 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms