RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 C6orf48Q9UBA6 75 aa4.67□□□□□ -1.66
SMAD4-209ENST00000589941 H7BZZ5 65 aa4.66□□□□□ -1.66
SMAD4-209ENST00000589941 ERC2-IT1O76042 136 aa4.66□□□□□ -1.66
SMAD4-209ENST00000589941 Q5XG85 94 aa4.66□□□□□ -1.66
SMAD4-209ENST00000589941 Q6ZQY7 126 aa4.66□□□□□ -1.66
SMAD4-209ENST00000589941 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
SMAD4-209ENST00000589941 IGLV10-54A0A075B6I4 117 aa4.65□□□□□ -1.67
SMAD4-209ENST00000589941 ZNF73O43830 326 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-209ENST00000589941 COX7BP24311 80 aa4.65□□□□□ -1.67
SMAD4-209ENST00000589941 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.67
SMAD4-209ENST00000589941 DSCR8Q96T75 97 aa4.65□□□□□ -1.67
SMAD4-209ENST00000589941 PLAC8Q9NZF1 115 aa4.65□□□□□ -1.67
SMAD4-209ENST00000589941 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
SMAD4-209ENST00000589941 M0R378 163 aa4.64□□□□□ -1.67
SMAD4-209ENST00000589941 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
SMAD4-209ENST00000589941 C7orf33Q8WU49 177 aa4.64□□□□□ -1.67
SMAD4-209ENST00000589941 LAMTOR3Q9UHA4 124 aa4.64□□□□□ -1.67
SMAD4-209ENST00000589941 KLK12Q9UKR0 248 aa4.64□□□□□ -1.67
SMAD4-209ENST00000589941 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
SMAD4-209ENST00000589941 A0A1B0GW54 56 aa4.63□□□□□ -1.67
SMAD4-209ENST00000589941 NDUFC1O43677 76 aa4.63□□□□□ -1.67
SMAD4-209ENST00000589941 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-209ENST00000589941 C20orf197Q8N268 126 aa4.63□□□□□ -1.67
SMAD4-209ENST00000589941 RMI2Q96E14 147 aa4.63□□□□□ -1.67
SMAD4-209ENST00000589941 V9GYY9 64 aa4.62□□□□□ -1.67
SMAD4-209ENST00000589941 USH2AO75445 5202 aa4.62□□□□□ -1.67
SMAD4-209ENST00000589941 C15orf56Q8N910 161 aa4.61□□□□□ -1.67
SMAD4-209ENST00000589941 IGLV5-48A0A075B6I7 105 aa4.6□□□□□ -1.67
SMAD4-209ENST00000589941 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
SMAD4-209ENST00000589941 KCNQ1DNQ9H478 68 aa4.6□□□□□ -1.67
SMAD4-209ENST00000589941 IGKV4-1P06312 121 aa4.59□□□□□ -1.67
SMAD4-209ENST00000589941 TLX1NBP0CAT3 122 aa4.59□□□□□ -1.67
SMAD4-209ENST00000589941 CAMK2N2Q96S95 79 aa4.59□□□□□ -1.67
SMAD4-209ENST00000589941 SPRR1AP35321 89 aa4.58□□□□□ -1.68
SMAD4-209ENST00000589941 OCR1Q9BZK8 76 aa4.58□□□□□ -1.68
SMAD4-209ENST00000589941 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
SMAD4-209ENST00000589941 PSORS1C2Q9UIG4 136 aa4.58□□□□□ -1.68
SMAD4-209ENST00000589941 KRTAP4-16G5E9R7 235 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-209ENST00000589941 CNBPP62633 177 aaKnown RBP4.57□□□□□ -1.68
SMAD4-209ENST00000589941 NREPQ16612 68 aa4.57□□□□□ -1.68
SMAD4-209ENST00000589941 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
SMAD4-209ENST00000589941 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-209ENST00000589941 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
SMAD4-209ENST00000589941 IGKV2-24A0A0C4DH68 120 aa4.56□□□□□ -1.68
SMAD4-209ENST00000589941 DSCR10P59022 87 aa4.56□□□□□ -1.68
SMAD4-209ENST00000589941 C4orf26Q17RF5 130 aa4.56□□□□□ -1.68
SMAD4-209ENST00000589941 Q8NBF4 154 aa4.56□□□□□ -1.68
SMAD4-209ENST00000589941 F8WEM9 126 aa4.55□□□□□ -1.68
SMAD4-209ENST00000589941 BPY2O14599 106 aa4.55□□□□□ -1.68
SMAD4-209ENST00000589941 HIGD2BQ4VC39 106 aa4.55□□□□□ -1.68
SMAD4-209ENST00000589941 Q8N377 158 aa4.55□□□□□ -1.68
SMAD4-209ENST00000589941 TMEM254Q8TBM7 123 aa4.55□□□□□ -1.68
SMAD4-209ENST00000589941 DHRS4-AS1Q9P1J3 65 aa4.55□□□□□ -1.68
SMAD4-209ENST00000589941 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
SMAD4-209ENST00000589941 FP248Q71RG6 208 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-209ENST00000589941 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
SMAD4-209ENST00000589941 A0A096LNI7 61 aa4.53□□□□□ -1.68
SMAD4-209ENST00000589941 HRCT1Q6UXD1 115 aa4.53□□□□□ -1.68
SMAD4-209ENST00000589941 Q6ZRX8 168 aa4.53□□□□□ -1.68
SMAD4-209ENST00000589941 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
SMAD4-209ENST00000589941 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
SMAD4-209ENST00000589941 A0A1W2PNM2 257 aa4.52□□□□□ -1.69
SMAD4-209ENST00000589941 IGLV1-50A0A075B6I6 118 aa4.51□□□□□ -1.69
SMAD4-209ENST00000589941 KRTAP1-4P0C5Y4 121 aa4.51□□□□□ -1.69
SMAD4-209ENST00000589941 ZCCHC13Q8WW36 166 aaKnown RBP4.51□□□□□ -1.69
SMAD4-209ENST00000589941 NKAPP1Q8N9T2 125 aa4.5□□□□□ -1.69
SMAD4-209ENST00000589941 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
SMAD4-209ENST00000589941 Q9BRP9 147 aa4.5□□□□□ -1.69
SMAD4-209ENST00000589941 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
SMAD4-209ENST00000589941 MT1HP80294 61 aa4.49□□□□□ -1.69
SMAD4-209ENST00000589941 Q8N9L7 120 aa4.48□□□□□ -1.69
SMAD4-209ENST00000589941 KRTAP19-2Q3LHN2 52 aa4.47□□□□□ -1.69
SMAD4-209ENST00000589941 C1orf137Q5JT78 98 aa4.47□□□□□ -1.69
SMAD4-209ENST00000589941 ETDCA0A1B0GVM5 59 aa4.46□□□□□ -1.7
SMAD4-209ENST00000589941 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
SMAD4-209ENST00000589941 H0Y9J4 135 aa4.45□□□□□ -1.7
SMAD4-209ENST00000589941 hDV103S1A0JD37 113 aa4.44□□□□□ -1.7
SMAD4-209ENST00000589941 RPL37AP8A6NKH3 93 aa4.44□□□□□ -1.7
SMAD4-209ENST00000589941 TPRXLQ17RH7 258 aa4.44□□□□□ -1.7
SMAD4-209ENST00000589941 MRPL55Q7Z7F7 128 aaKnown RBP4.44□□□□□ -1.7
SMAD4-209ENST00000589941 HIGD2AQ9BW72 106 aa4.44□□□□□ -1.7
SMAD4-209ENST00000589941 LINC00474Q9P2X8 69 aa4.44□□□□□ -1.7
SMAD4-209ENST00000589941 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
SMAD4-209ENST00000589941 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SMAD4-209ENST00000589941 SPRR1BP22528 89 aa4.43□□□□□ -1.7
SMAD4-209ENST00000589941 FAM229BQ4G0N7 80 aa4.43□□□□□ -1.7
SMAD4-209ENST00000589941 C1orf195Q5TG92 126 aa4.43□□□□□ -1.7
SMAD4-209ENST00000589941 ST20-AS1Q8NBB2 130 aa4.43□□□□□ -1.7
SMAD4-209ENST00000589941 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
SMAD4-209ENST00000589941 KRTAP11-1Q8IUC1 163 aa4.42□□□□□ -1.7
SMAD4-209ENST00000589941 DEFB105AQ8NG35 78 aa4.42□□□□□ -1.7
SMAD4-209ENST00000589941 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-209ENST00000589941 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
SMAD4-209ENST00000589941 HCG22E2RYF7 251 aa4.41□□□□□ -1.7
SMAD4-209ENST00000589941 K7EQZ3 153 aa4.41□□□□□ -1.7
SMAD4-209ENST00000589941 IGLV7-43P04211 117 aa4.41□□□□□ -1.7
SMAD4-209ENST00000589941 CD164Q04900 197 aa4.41□□□□□ -1.7
SMAD4-209ENST00000589941 Q1T7F1 81 aa4.41□□□□□ -1.7
SMAD4-209ENST00000589941 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
SMAD4-209ENST00000589941 H3BPC8 53 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms