RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	TMEM256-PLSCR3	K7ERE1	68 aa		11.02	□□□□□ -0.65
CIRBP-222	ENST00000589235	SIGMAR1	Q99720	223 aa		11.02	□□□□□ -0.65
CIRBP-222	ENST00000589235		A0A1W2PNM2	257 aa		11.01	□□□□□ -0.65
CIRBP-222	ENST00000589235	TRBV7-4	A0A0J9YYF1	115 aa		11	□□□□□ -0.65
CIRBP-222	ENST00000589235	VPS25	Q9BRG1	176 aa		11	□□□□□ -0.65
CIRBP-222	ENST00000589235	DSCR10	P59022	87 aa		10.99	□□□□□ -0.65
CIRBP-222	ENST00000589235	LINC00313	P59037	77 aa		10.98	□□□□□ -0.65
CIRBP-222	ENST00000589235	IGKV4-1	P06312	121 aa		10.97	□□□□□ -0.65
CIRBP-222	ENST00000589235		A0A1B0GV72	72 aa		10.94	□□□□□ -0.66
CIRBP-222	ENST00000589235	CCK	P06307	115 aa		10.92	□□□□□ -0.66
CIRBP-222	ENST00000589235	BAALC-AS2	P0C853	105 aa		10.92	□□□□□ -0.66
CIRBP-222	ENST00000589235	FLG	P20930	4061 aa	Predicted RBP	10.89	□□□□□ -0.67
CIRBP-222	ENST00000589235	LINC00472	Q9H8W2	130 aa		10.86	□□□□□ -0.67
CIRBP-222	ENST00000589235	RBM3	P98179	157 aa	Known RBP	10.84	□□□□□ -0.67
CIRBP-222	ENST00000589235	DEFB116	Q30KQ4	102 aa		10.84	□□□□□ -0.67
CIRBP-222	ENST00000589235	IGHV6-1	A0A0B4J1U7	121 aa		10.83	□□□□□ -0.68
CIRBP-222	ENST00000589235	FAM240A	A0A1B0GVK7	77 aa		10.83	□□□□□ -0.68
CIRBP-222	ENST00000589235	DSCR8	Q96T75	97 aa		10.83	□□□□□ -0.68
CIRBP-222	ENST00000589235	KRTAP16-1	A8MUX0	517 aa		10.82	□□□□□ -0.68
CIRBP-222	ENST00000589235	C21orf62-AS1	Q17RA5	79 aa		10.82	□□□□□ -0.68
CIRBP-222	ENST00000589235	FAM236D	A0A1B0GTK5	79 aa		10.81	□□□□□ -0.68
CIRBP-222	ENST00000589235	FAM236C	P0DP71	79 aa		10.81	□□□□□ -0.68
CIRBP-222	ENST00000589235	ACYP1	P07311	99 aa		10.8	□□□□□ -0.68
CIRBP-222	ENST00000589235	C8orf87	E5RJ46	101 aa		10.79	□□□□□ -0.68
CIRBP-222	ENST00000589235	RBM12B-AS1	Q9P1G2	102 aa		10.79	□□□□□ -0.68
CIRBP-222	ENST00000589235	NOTCH2NL	Q7Z3S9	236 aa		10.77	□□□□□ -0.69
CIRBP-222	ENST00000589235	SCGB1A1	P11684	91 aa		10.75	□□□□□ -0.69
CIRBP-222	ENST00000589235		A0A1B0GVX0	72 aa		10.74	□□□□□ -0.69
CIRBP-222	ENST00000589235	JMJD7-PLA2G4B	H0Y9G9	81 aa		10.74	□□□□□ -0.69
CIRBP-222	ENST00000589235		J3KT08	172 aa		10.74	□□□□□ -0.69
CIRBP-222	ENST00000589235	KRTAP9-8	Q9BYQ0	159 aa		10.69	□□□□□ -0.7
CIRBP-222	ENST00000589235	NDUFB1	O75438	58 aa		10.68	□□□□□ -0.7
CIRBP-222	ENST00000589235	HRES1	P13985	223 aa		10.67	□□□□□ -0.7
CIRBP-222	ENST00000589235		Q6ZQT0	140 aa		10.66	□□□□□ -0.7
CIRBP-222	ENST00000589235	PCP4	P48539	62 aa		10.65	□□□□□ -0.7
CIRBP-222	ENST00000589235	MPLKIP	Q8TAP9	179 aa		10.65	□□□□□ -0.7
CIRBP-222	ENST00000589235		A0A1B0GW54	56 aa		10.64	□□□□□ -0.71
CIRBP-222	ENST00000589235	MT-ATP8	P03928	68 aa		10.64	□□□□□ -0.71
CIRBP-222	ENST00000589235	C14orf132	Q9NPU4	83 aa		10.63	□□□□□ -0.71
CIRBP-222	ENST00000589235	ZCCHC13	Q8WW36	166 aa	Known RBP	10.62	□□□□□ -0.71
CIRBP-222	ENST00000589235	PDE6G	P18545	87 aa		10.61	□□□□□ -0.71
CIRBP-222	ENST00000589235	LINC00643	Q86TS7	51 aa		10.61	□□□□□ -0.71
CIRBP-222	ENST00000589235	LOC110117498	A0A087WWA1	95 aa		10.59	□□□□□ -0.71
CIRBP-222	ENST00000589235	IMUP	Q9GZP8	106 aa		10.56	□□□□□ -0.72
CIRBP-222	ENST00000589235	SPINK7	P58062	85 aa		10.55	□□□□□ -0.72
CIRBP-222	ENST00000589235		Q8N9P0	234 aa	Predicted RBP	10.55	□□□□□ -0.72
CIRBP-222	ENST00000589235		A8MWP4	228 aa		10.54	□□□□□ -0.72
CIRBP-222	ENST00000589235	MT2A	P02795	61 aa		10.52	□□□□□ -0.73
CIRBP-222	ENST00000589235	C8orf17	Q9NRJ1	99 aa		10.52	□□□□□ -0.73
CIRBP-222	ENST00000589235	LINC00846	Q9NV44	126 aa		10.49	□□□□□ -0.73
CIRBP-222	ENST00000589235	KRTAP10-10	P60014	251 aa		10.47	□□□□□ -0.73
CIRBP-222	ENST00000589235	NREP	Q16612	68 aa		10.47	□□□□□ -0.73
CIRBP-222	ENST00000589235	IGKV3D-7	A0A0C4DH55	119 aa		10.46	□□□□□ -0.73
CIRBP-222	ENST00000589235		Q6ZVQ6	151 aa		10.45	□□□□□ -0.74
CIRBP-222	ENST00000589235	ATP5EP2	Q5VTU8	51 aa		10.44	□□□□□ -0.74
CIRBP-222	ENST00000589235	MT1F	P04733	61 aa		10.43	□□□□□ -0.74
CIRBP-222	ENST00000589235	PRR15	Q8IV56	129 aa		10.43	□□□□□ -0.74
CIRBP-222	ENST00000589235	UBL5	Q9BZL1	73 aa		10.43	□□□□□ -0.74
CIRBP-222	ENST00000589235	WFDC13	Q8IUB5	93 aa		10.39	□□□□□ -0.75
CIRBP-222	ENST00000589235	USH2A	O75445	5202 aa		10.38	□□□□□ -0.75
CIRBP-222	ENST00000589235	TMEM254	Q8TBM7	123 aa		10.37	□□□□□ -0.75
CIRBP-222	ENST00000589235	MRPL34	Q9BQ48	92 aa	Known RBP	10.36	□□□□□ -0.75
CIRBP-222	ENST00000589235	KRTAP9-3	Q9BYQ3	159 aa		10.35	□□□□□ -0.75
CIRBP-222	ENST00000589235	SSPO	A2VEC9	5147 aa		10.32	□□□□□ -0.76
CIRBP-222	ENST00000589235	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.32	□□□□□ -0.76
CIRBP-222	ENST00000589235	ANAPC13	Q9BS18	74 aa		10.32	□□□□□ -0.76
CIRBP-222	ENST00000589235	MMP24-AS1	A0A0U1RRL7	71 aa		10.31	□□□□□ -0.76
CIRBP-222	ENST00000589235	hDV103S1	A0JD37	113 aa		10.31	□□□□□ -0.76
CIRBP-222	ENST00000589235	LCE2B	O14633	110 aa		10.31	□□□□□ -0.76
CIRBP-222	ENST00000589235	NDUFS5	O43920	106 aa		10.3	□□□□□ -0.76
CIRBP-222	ENST00000589235	CXCL6	P80162	114 aa		10.29	□□□□□ -0.76
CIRBP-222	ENST00000589235	HIST1H4A	P62805	103 aa	Known RBP	10.28	□□□□□ -0.76
CIRBP-222	ENST00000589235	FAM236A	A0A1B0GUQ0	79 aa		10.26	□□□□□ -0.77
CIRBP-222	ENST00000589235	FAM236B	A0A1B0GV22	79 aa		10.26	□□□□□ -0.77
CIRBP-222	ENST00000589235		K7EQZ3	153 aa		10.26	□□□□□ -0.77
CIRBP-222	ENST00000589235	BPY2	O14599	106 aa		10.26	□□□□□ -0.77
CIRBP-222	ENST00000589235	KRTAP9-7	A8MTY7	169 aa		10.25	□□□□□ -0.77
CIRBP-222	ENST00000589235	KRTAP19-1	Q8IUB9	90 aa		10.23	□□□□□ -0.77
CIRBP-222	ENST00000589235	ATOX1	O00244	68 aa		10.22	□□□□□ -0.77
CIRBP-222	ENST00000589235	H1FX-AS1	Q4G0G2	97 aa		10.22	□□□□□ -0.77
CIRBP-222	ENST00000589235	IGKV2D-30	A0A075B6S6	120 aa		10.16	□□□□□ -0.78
CIRBP-222	ENST00000589235	IGKV2-30	P06310	120 aa		10.16	□□□□□ -0.78
CIRBP-222	ENST00000589235		A0A087WVE0	104 aa		10.15	□□□□□ -0.78
CIRBP-222	ENST00000589235	C7orf65	Q6ZTY9	151 aa		10.15	□□□□□ -0.78
CIRBP-222	ENST00000589235	CASC2	Q6XLA1	102 aa		10.12	□□□□□ -0.79
CIRBP-222	ENST00000589235	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	10.11	□□□□□ -0.79
CIRBP-222	ENST00000589235	UQCRQ	O14949	82 aa		10.1	□□□□□ -0.79
CIRBP-222	ENST00000589235	COX7C	P15954	63 aa		10.09	□□□□□ -0.79
CIRBP-222	ENST00000589235		Q5W150	140 aa		10.09	□□□□□ -0.79
CIRBP-222	ENST00000589235	SMIM20	Q8N5G0	67 aa		10.09	□□□□□ -0.79
CIRBP-222	ENST00000589235	HCG22	E2RYF7	251 aa		10.08	□□□□□ -0.8
CIRBP-222	ENST00000589235	SERP2	Q8N6R1	65 aa		10.08	□□□□□ -0.8
CIRBP-222	ENST00000589235	CCDC179	H3BU77	68 aa		10.07	□□□□□ -0.8
CIRBP-222	ENST00000589235		Q8N9L7	120 aa		10.06	□□□□□ -0.8
CIRBP-222	ENST00000589235	KRTAP19-6	Q3LI70	58 aa		10.03	□□□□□ -0.8
CIRBP-222	ENST00000589235	TRAV7	A0A075B6U4	112 aa		10	□□□□□ -0.81
CIRBP-222	ENST00000589235	C4orf26	Q17RF5	130 aa		9.97	□□□□□ -0.81
CIRBP-222	ENST00000589235	MACF1	Q9UPN3	7388 aa	Known RBP	9.87	□□□□□ -0.83
CIRBP-222	ENST00000589235	OCR1	Q9BZK8	76 aa		9.86	□□□□□ -0.83
CIRBP-222	ENST00000589235	TP53AIP1	Q9HCN2	124 aa		9.85	□□□□□ -0.83

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