RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 Q6ZSA8 131 aa5.98□□□□□ -1.45
VPS25-202ENST00000589219 PRR15Q8IV56 129 aa5.98□□□□□ -1.45
VPS25-202ENST00000589219 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
VPS25-202ENST00000589219 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
VPS25-202ENST00000589219 MOBPQ13875 183 aa5.97□□□□□ -1.45
VPS25-202ENST00000589219 FAM30AQ9NZY2 134 aa5.97□□□□□ -1.45
VPS25-202ENST00000589219 NDUFB1O75438 58 aa5.96□□□□□ -1.46
VPS25-202ENST00000589219 CIRBP-AS1Q8TBR5 109 aa5.96□□□□□ -1.46
VPS25-202ENST00000589219 KRTAP29-1A8MX34 341 aaPredicted RBP5.95□□□□□ -1.46
VPS25-202ENST00000589219 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
VPS25-202ENST00000589219 DEFB116Q30KQ4 102 aa5.95□□□□□ -1.46
VPS25-202ENST00000589219 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
VPS25-202ENST00000589219 SRRM2Q9UQ35 2752 aaKnown RBP5.94□□□□□ -1.46
VPS25-202ENST00000589219 C5orf47Q569G3 176 aa5.94□□□□□ -1.46
VPS25-202ENST00000589219 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
VPS25-202ENST00000589219 WFDC13Q8IUB5 93 aa5.94□□□□□ -1.46
VPS25-202ENST00000589219 CD164Q04900 197 aa5.93□□□□□ -1.46
VPS25-202ENST00000589219 Q96NJ1 140 aa5.93□□□□□ -1.46
VPS25-202ENST00000589219 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
VPS25-202ENST00000589219 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
VPS25-202ENST00000589219 H3BPC8 53 aa5.91□□□□□ -1.46
VPS25-202ENST00000589219 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
VPS25-202ENST00000589219 SSBP3-AS1Q7Z2R9 100 aa5.91□□□□□ -1.46
VPS25-202ENST00000589219 HERC1Q15751 4861 aa5.9□□□□□ -1.46
VPS25-202ENST00000589219 MP68P56378 58 aa5.9□□□□□ -1.46
VPS25-202ENST00000589219 FAM229BQ4G0N7 80 aa5.9□□□□□ -1.46
VPS25-202ENST00000589219 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.46
VPS25-202ENST00000589219 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
VPS25-202ENST00000589219 FAT1Q14517 4588 aa5.89□□□□□ -1.47
VPS25-202ENST00000589219 HRCT1Q6UXD1 115 aa5.89□□□□□ -1.47
VPS25-202ENST00000589219 A0A1B0GVX0 72 aa5.88□□□□□ -1.47
VPS25-202ENST00000589219 ASB16-AS1Q495Z4 193 aa5.88□□□□□ -1.47
VPS25-202ENST00000589219 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
VPS25-202ENST00000589219 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
VPS25-202ENST00000589219 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
VPS25-202ENST00000589219 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
VPS25-202ENST00000589219 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
VPS25-202ENST00000589219 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
VPS25-202ENST00000589219 H0Y9P7 68 aa5.85□□□□□ -1.47
VPS25-202ENST00000589219 OXTP01178 125 aa5.85□□□□□ -1.47
VPS25-202ENST00000589219 TP53AIP1Q9HCN2 124 aa5.85□□□□□ -1.47
VPS25-202ENST00000589219 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
VPS25-202ENST00000589219 TRAV22A0A0B4J277 110 aa5.83□□□□□ -1.48
VPS25-202ENST00000589219 Q5XG85 94 aa5.83□□□□□ -1.48
VPS25-202ENST00000589219 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
VPS25-202ENST00000589219 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
VPS25-202ENST00000589219 LINC00208Q96KT6 92 aa5.81□□□□□ -1.48
VPS25-202ENST00000589219 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
VPS25-202ENST00000589219 LIMD2Q9BT23 127 aa5.81□□□□□ -1.48
VPS25-202ENST00000589219 A0A087X002 238 aa5.8□□□□□ -1.48
VPS25-202ENST00000589219 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
VPS25-202ENST00000589219 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
VPS25-202ENST00000589219 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
VPS25-202ENST00000589219 CYP4F30PQ9H0H9 118 aa5.8□□□□□ -1.48
VPS25-202ENST00000589219 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
VPS25-202ENST00000589219 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
VPS25-202ENST00000589219 SPANXA2-OT1Q8N9U9 137 aa5.78□□□□□ -1.48
VPS25-202ENST00000589219 SPINK6Q6UWN8 80 aa5.77□□□□□ -1.49
VPS25-202ENST00000589219 C1orf64Q8NEQ6 169 aa5.77□□□□□ -1.49
VPS25-202ENST00000589219 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
VPS25-202ENST00000589219 NDUFS5O43920 106 aa5.75□□□□□ -1.49
VPS25-202ENST00000589219 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
VPS25-202ENST00000589219 C1orf195Q5TG92 126 aa5.73□□□□□ -1.49
VPS25-202ENST00000589219 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
VPS25-202ENST00000589219 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
VPS25-202ENST00000589219 SPINK1P00995 79 aa5.71□□□□□ -1.5
VPS25-202ENST00000589219 LOC101927531A0A1B0GV80 90 aa5.7□□□□□ -1.5
VPS25-202ENST00000589219 LINC00313P59037 77 aa5.7□□□□□ -1.5
VPS25-202ENST00000589219 SPAG11AQ6PDA7 123 aa5.7□□□□□ -1.5
VPS25-202ENST00000589219 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
VPS25-202ENST00000589219 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
VPS25-202ENST00000589219 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
VPS25-202ENST00000589219 IGLV7-46A0A075B6I9 117 aa5.68□□□□□ -1.5
VPS25-202ENST00000589219 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
VPS25-202ENST00000589219 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
VPS25-202ENST00000589219 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
VPS25-202ENST00000589219 PRR4Q16378 134 aa5.66□□□□□ -1.5
VPS25-202ENST00000589219 FAT3Q8TDW7 4589 aa5.65□□□□□ -1.5
VPS25-202ENST00000589219 C4orf26Q17RF5 130 aa5.65□□□□□ -1.5
VPS25-202ENST00000589219 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
VPS25-202ENST00000589219 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
VPS25-202ENST00000589219 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
VPS25-202ENST00000589219 PRR26Q8N8Z3 221 aa5.63□□□□□ -1.51
VPS25-202ENST00000589219 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
VPS25-202ENST00000589219 V9GYY9 64 aa5.62□□□□□ -1.51
VPS25-202ENST00000589219 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
VPS25-202ENST00000589219 Q1T7F1 81 aa5.61□□□□□ -1.51
VPS25-202ENST00000589219 Q5W150 140 aa5.61□□□□□ -1.51
VPS25-202ENST00000589219 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
VPS25-202ENST00000589219 COA5Q86WW8 74 aa5.6□□□□□ -1.51
VPS25-202ENST00000589219 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
VPS25-202ENST00000589219 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
VPS25-202ENST00000589219 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
VPS25-202ENST00000589219 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
VPS25-202ENST00000589219 DMAC1Q96GE9 116 aa5.52□□□□□ -1.53
VPS25-202ENST00000589219 HRES1P13985 223 aa5.51□□□□□ -1.53
VPS25-202ENST00000589219 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
VPS25-202ENST00000589219 ACYP2P14621 99 aa5.5□□□□□ -1.53
VPS25-202ENST00000589219 RETNLBQ9BQ08 111 aa5.5□□□□□ -1.53
VPS25-202ENST00000589219 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms