RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 SFTA2Q6UW10 78 aa1.33□□□□□ -2.2
TUBD1-208ENST00000588009 BAGE3Q86Y29 109 aa1.33□□□□□ -2.2
TUBD1-208ENST00000588009 S100ZQ8WXG8 99 aa1.33□□□□□ -2.2
TUBD1-208ENST00000588009 PRO1854Q9UHT4 67 aa1.33□□□□□ -2.2
TUBD1-208ENST00000588009 DEFB131BA0A096LNP1 70 aa1.32□□□□□ -2.2
TUBD1-208ENST00000588009 IGLC7A0M8Q6 106 aa1.32□□□□□ -2.2
TUBD1-208ENST00000588009 TRAPPC2P0DI81 140 aa1.32□□□□□ -2.2
TUBD1-208ENST00000588009 TRAPPC2BP0DI82 140 aa1.32□□□□□ -2.2
TUBD1-208ENST00000588009 FXYD6P3P58550 94 aa1.32□□□□□ -2.2
TUBD1-208ENST00000588009 SFT2D2O95562 160 aa1.31□□□□□ -2.2
TUBD1-208ENST00000588009 NCBP2-AS2Q69YL0 99 aa1.31□□□□□ -2.2
TUBD1-208ENST00000588009 C9orf62Q8N4C0 152 aa1.31□□□□□ -2.2
TUBD1-208ENST00000588009 SMIM11BQ8TCY0 68 aa1.31□□□□□ -2.2
TUBD1-208ENST00000588009 NPVFQ9HCQ7 196 aa1.31□□□□□ -2.2
TUBD1-208ENST00000588009 UQCR10Q9UDW1 63 aa1.31□□□□□ -2.2
TUBD1-208ENST00000588009 LOC285095A0A1B0GVY8 99 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 TMEM14DPA8MWL7 114 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 F8VRH5 84 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 G3V318 75 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 Q5BKY6 102 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 Q6ZRX8 168 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 LINC01558Q9Y6Z2 57 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 V9GYS6 101 aa1.3□□□□□ -2.2
TUBD1-208ENST00000588009 TRBV7-7A0A0K0K1E9 115 aa1.29□□□□□ -2.2
TUBD1-208ENST00000588009 CTXND1A0A1B0GTU2 59 aa1.29□□□□□ -2.2
TUBD1-208ENST00000588009 F2Z2F3 143 aa1.29□□□□□ -2.2
TUBD1-208ENST00000588009 ATOX1O00244 68 aa1.29□□□□□ -2.2
TUBD1-208ENST00000588009 APOC3P02656 99 aa1.29□□□□□ -2.2
TUBD1-208ENST00000588009 LINC00472Q9H8W2 130 aa1.29□□□□□ -2.2
TUBD1-208ENST00000588009 H7BZZ5 65 aa1.28□□□□□ -2.2
TUBD1-208ENST00000588009 COX6CP09669 75 aa1.28□□□□□ -2.2
TUBD1-208ENST00000588009 KRTAP19-2Q3LHN2 52 aa1.28□□□□□ -2.2
TUBD1-208ENST00000588009 TMEM170BQ5T4T1 132 aa1.28□□□□□ -2.2
TUBD1-208ENST00000588009 RPS27LQ71UM5 84 aaKnown RBP1.28□□□□□ -2.2
TUBD1-208ENST00000588009 SERP2Q8N6R1 65 aa1.28□□□□□ -2.2
TUBD1-208ENST00000588009 A0A0D9SG42 100 aa1.27□□□□□ -2.21
TUBD1-208ENST00000588009 MRPL33O75394 65 aaKnown RBP1.27□□□□□ -2.21
TUBD1-208ENST00000588009 SNRPGP62308 76 aaKnown RBP1.27□□□□□ -2.21
TUBD1-208ENST00000588009 CFAP126Q5VTH2 177 aa1.27□□□□□ -2.21
TUBD1-208ENST00000588009 BAGE2Q86Y30 109 aa1.27□□□□□ -2.21
TUBD1-208ENST00000588009 FAM223AQ8IWN6 122 aa1.27□□□□□ -2.21
TUBD1-208ENST00000588009 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
TUBD1-208ENST00000588009 ARL2-SNX15V9GYD0 113 aa1.27□□□□□ -2.21
TUBD1-208ENST00000588009 CCL22O00626 93 aa1.26□□□□□ -2.21
TUBD1-208ENST00000588009 UQCR11O14957 56 aa1.26□□□□□ -2.21
TUBD1-208ENST00000588009 NDUFC1O43677 76 aa1.26□□□□□ -2.21
TUBD1-208ENST00000588009 S100A3P33764 101 aa1.26□□□□□ -2.21
TUBD1-208ENST00000588009 MT4P47944 62 aa1.26□□□□□ -2.21
TUBD1-208ENST00000588009 RPL38P63173 70 aaKnown RBP1.26□□□□□ -2.21
TUBD1-208ENST00000588009 TRGV9Q99603 122 aa1.26□□□□□ -2.21
TUBD1-208ENST00000588009 NXT2Q9NPJ8 142 aaKnown RBP1.26□□□□□ -2.21
TUBD1-208ENST00000588009 CACFD1Q9UGQ2 172 aa1.26□□□□□ -2.21
TUBD1-208ENST00000588009 PDCD5O14737 125 aa1.25□□□□□ -2.21
TUBD1-208ENST00000588009 CFDP00746 253 aaPredicted RBP1.25□□□□□ -2.21
TUBD1-208ENST00000588009 NMBP08949 121 aa1.25□□□□□ -2.21
TUBD1-208ENST00000588009 FAUP35544 74 aaKnown RBP1.25□□□□□ -2.21
TUBD1-208ENST00000588009 C20orf78Q9BR46 151 aa1.25□□□□□ -2.21
TUBD1-208ENST00000588009 FAM223BA6NKX1 122 aa1.24□□□□□ -2.21
TUBD1-208ENST00000588009 SYS1-DBNDD2H3BUS1 97 aa1.24□□□□□ -2.21
TUBD1-208ENST00000588009 SMIM11AP58511 58 aa1.24□□□□□ -2.21
TUBD1-208ENST00000588009 PRO1933Q9H354 126 aa1.24□□□□□ -2.21
TUBD1-208ENST00000588009 FLGP20930 4061 aaPredicted RBP1.23□□□□□ -2.21
TUBD1-208ENST00000588009 SNRPGP15A8MWD9 76 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 M0R3E3 92 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 HTN3P15516 51 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 ALKAL2Q6UX46 152 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 TOMM5Q8N4H5 51 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 SMIM4Q8WVI0 70 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 SPRR4Q96PI1 79 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 ABRACLQ9P1F3 81 aa1.23□□□□□ -2.21
TUBD1-208ENST00000588009 FXYD6-FXYD2A0A087WZ82 144 aa1.22□□□□□ -2.21
TUBD1-208ENST00000588009 GCHFRP30047 84 aa1.22□□□□□ -2.21
TUBD1-208ENST00000588009 DEFA5Q01523 94 aa1.22□□□□□ -2.21
TUBD1-208ENST00000588009 PYY3Q5JQD4 70 aa1.22□□□□□ -2.21
TUBD1-208ENST00000588009 FXYD6Q9H0Q3 95 aa1.22□□□□□ -2.21
TUBD1-208ENST00000588009 HILPDAQ9Y5L2 63 aa1.22□□□□□ -2.21
TUBD1-208ENST00000588009 TRBV25-1A0A075B6N4 114 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 KANTRA0A1W2PQU2 76 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 GYPAP02724 150 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 SAA2P0DJI9 122 aaPredicted RBP1.21□□□□□ -2.22
TUBD1-208ENST00000588009 PEA15Q15121 130 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 HMGN3Q15651 99 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 PRR15LQ9BU68 103 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 CMC2Q9NRP2 79 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 SMCO4Q9NRQ5 59 aa1.21□□□□□ -2.22
TUBD1-208ENST00000588009 CPSF4LA6NMK7 179 aaKnown RBP1.2□□□□□ -2.22
TUBD1-208ENST00000588009 SFTA3P0C7M3 94 aa1.2□□□□□ -2.22
TUBD1-208ENST00000588009 COX17Q14061 63 aa1.2□□□□□ -2.22
TUBD1-208ENST00000588009 S100A16Q96FQ6 103 aaKnown RBP1.2□□□□□ -2.22
TUBD1-208ENST00000588009 C7orf77A4D0Y5 90 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 K7EP34 96 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 M0R1W7 72 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 HMGN2P05204 90 aaKnown RBP1.19□□□□□ -2.22
TUBD1-208ENST00000588009 HEPN1Q6WQI6 88 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 COX6B2Q6YFQ2 88 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 S100A13Q99584 98 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 NMES1Q9C002 83 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 HIGD1BQ9P298 99 aa1.19□□□□□ -2.22
TUBD1-208ENST00000588009 A0A087WWC5 75 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms