RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	RBM12B-AS1	Q9P1G2	102 aa		10.97	□□□□□ -0.65
PLEKHM1-214	ENST00000586084		C9JAW5	83 aa		10.96	□□□□□ -0.65
PLEKHM1-214	ENST00000586084	RBM3	P98179	157 aa	Known RBP	10.96	□□□□□ -0.65
PLEKHM1-214	ENST00000586084	KRTAP19-1	Q8IUB9	90 aa		10.96	□□□□□ -0.65
PLEKHM1-214	ENST00000586084	SPCS1	Q9Y6A9	102 aa		10.96	□□□□□ -0.65
PLEKHM1-214	ENST00000586084	MT1F	P04733	61 aa		10.95	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	SIGMAR1	Q99720	223 aa		10.95	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	JMJD7-PLA2G4B	H0Y9G9	81 aa		10.94	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	LCE2B	O14633	110 aa		10.94	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	LINC00313	P59037	77 aa		10.93	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	KRTAP10-10	P60014	251 aa		10.93	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	DSCR8	Q96T75	97 aa		10.93	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	KRTAP16-1	A8MUX0	517 aa		10.92	□□□□□ -0.66
PLEKHM1-214	ENST00000586084		H3BT86	120 aa		10.91	□□□□□ -0.66
PLEKHM1-214	ENST00000586084		A0A1B0GV72	72 aa		10.9	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	KRTAP9-3	Q9BYQ3	159 aa		10.9	□□□□□ -0.66
PLEKHM1-214	ENST00000586084	TRBV7-4	A0A0J9YYF1	115 aa		10.88	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	MPLKIP	Q8TAP9	179 aa		10.88	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	10.87	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	HRES1	P13985	223 aa		10.87	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	CCK	P06307	115 aa		10.86	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	PDE6G	P18545	87 aa		10.86	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	GTF2H5	Q6ZYL4	71 aa		10.86	□□□□□ -0.67
PLEKHM1-214	ENST00000586084		A0A1W2PNM2	257 aa		10.85	□□□□□ -0.67
PLEKHM1-214	ENST00000586084		K7EP34	96 aa		10.85	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	IGKV4-1	P06312	121 aa		10.85	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	C21orf62-AS1	Q17RA5	79 aa		10.84	□□□□□ -0.67
PLEKHM1-214	ENST00000586084	LINC00846	Q9NV44	126 aa		10.82	□□□□□ -0.68
PLEKHM1-214	ENST00000586084	LOC110117498	A0A087WWA1	95 aa		10.8	□□□□□ -0.68
PLEKHM1-214	ENST00000586084	MTURN	Q8N3F0	131 aa		10.8	□□□□□ -0.68
PLEKHM1-214	ENST00000586084	NOTCH2NL	Q7Z3S9	236 aa		10.79	□□□□□ -0.68
PLEKHM1-214	ENST00000586084	VPS25	Q9BRG1	176 aa		10.79	□□□□□ -0.68
PLEKHM1-214	ENST00000586084		A0A1B0GW54	56 aa		10.78	□□□□□ -0.68
PLEKHM1-214	ENST00000586084		Q6ZQT0	140 aa		10.76	□□□□□ -0.69
PLEKHM1-214	ENST00000586084	C14orf132	Q9NPU4	83 aa		10.76	□□□□□ -0.69
PLEKHM1-214	ENST00000586084	IGHV6-1	A0A0B4J1U7	121 aa		10.73	□□□□□ -0.69
PLEKHM1-214	ENST00000586084		F8W1H4	67 aa		10.73	□□□□□ -0.69
PLEKHM1-214	ENST00000586084	DEFB116	Q30KQ4	102 aa		10.72	□□□□□ -0.69
PLEKHM1-214	ENST00000586084	LINC00472	Q9H8W2	130 aa		10.72	□□□□□ -0.69
PLEKHM1-214	ENST00000586084	PRO0461	Q9UI25	63 aa		10.72	□□□□□ -0.69
PLEKHM1-214	ENST00000586084	SMCP	P49901	116 aa	Predicted RBP	10.71	□□□□□ -0.69
PLEKHM1-214	ENST00000586084	KRTAP19-6	Q3LI70	58 aa		10.67	□□□□□ -0.7
PLEKHM1-214	ENST00000586084	C8orf87	E5RJ46	101 aa		10.66	□□□□□ -0.7
PLEKHM1-214	ENST00000586084	MACF1	Q9UPN3	7388 aa	Known RBP	10.64	□□□□□ -0.71
PLEKHM1-214	ENST00000586084	ZCCHC13	Q8WW36	166 aa	Known RBP	10.62	□□□□□ -0.71
PLEKHM1-214	ENST00000586084		A0A1B0GVX0	72 aa		10.61	□□□□□ -0.71
PLEKHM1-214	ENST00000586084		A8MWP4	228 aa		10.6	□□□□□ -0.71
PLEKHM1-214	ENST00000586084		J3KT08	172 aa		10.6	□□□□□ -0.71
PLEKHM1-214	ENST00000586084	SPINK7	P58062	85 aa		10.6	□□□□□ -0.71
PLEKHM1-214	ENST00000586084	SYNE2	Q8WXH0	6885 aa	Known RBP	10.59	□□□□□ -0.71
PLEKHM1-214	ENST00000586084	NREP	Q16612	68 aa		10.58	□□□□□ -0.72
PLEKHM1-214	ENST00000586084	ETDB	Q3ZM63	59 aa		10.56	□□□□□ -0.72
PLEKHM1-214	ENST00000586084		A0A1B0GV90	55 aa		10.53	□□□□□ -0.72
PLEKHM1-214	ENST00000586084	NDUFB1	O75438	58 aa		10.51	□□□□□ -0.73
PLEKHM1-214	ENST00000586084	WFDC13	Q8IUB5	93 aa		10.48	□□□□□ -0.73
PLEKHM1-214	ENST00000586084		Q8N9P0	234 aa	Predicted RBP	10.46	□□□□□ -0.73
PLEKHM1-214	ENST00000586084	KRTAP6-3	Q3LI67	103 aa		10.45	□□□□□ -0.74
PLEKHM1-214	ENST00000586084	UBL5	Q9BZL1	73 aa		10.45	□□□□□ -0.74
PLEKHM1-214	ENST00000586084		Q6ZVQ6	151 aa		10.43	□□□□□ -0.74
PLEKHM1-214	ENST00000586084	BPY2	O14599	106 aa		10.42	□□□□□ -0.74
PLEKHM1-214	ENST00000586084	ACYP1	P07311	99 aa		10.38	□□□□□ -0.75
PLEKHM1-214	ENST00000586084	PRR15	Q8IV56	129 aa		10.37	□□□□□ -0.75
PLEKHM1-214	ENST00000586084	IGKV3D-7	A0A0C4DH55	119 aa		10.36	□□□□□ -0.75
PLEKHM1-214	ENST00000586084	C8orf17	Q9NRJ1	99 aa		10.35	□□□□□ -0.75
PLEKHM1-214	ENST00000586084	FAM240A	A0A1B0GVK7	77 aa		10.32	□□□□□ -0.76
PLEKHM1-214	ENST00000586084		K7EQZ3	153 aa		10.29	□□□□□ -0.76
PLEKHM1-214	ENST00000586084	H1FX-AS1	Q4G0G2	97 aa		10.29	□□□□□ -0.76
PLEKHM1-214	ENST00000586084		J3QR89	54 aa		10.25	□□□□□ -0.77
PLEKHM1-214	ENST00000586084	CXCL6	P80162	114 aa		10.25	□□□□□ -0.77
PLEKHM1-214	ENST00000586084	MMP24-AS1	A0A0U1RRL7	71 aa		10.22	□□□□□ -0.77
PLEKHM1-214	ENST00000586084	TMEM254	Q8TBM7	123 aa		10.22	□□□□□ -0.77
PLEKHM1-214	ENST00000586084	hDV103S1	A0JD37	113 aa		10.21	□□□□□ -0.77
PLEKHM1-214	ENST00000586084		Q8N9L7	120 aa		10.19	□□□□□ -0.78
PLEKHM1-214	ENST00000586084	MRPL34	Q9BQ48	92 aa	Known RBP	10.19	□□□□□ -0.78
PLEKHM1-214	ENST00000586084	ATP5EP2	Q5VTU8	51 aa		10.17	□□□□□ -0.78
PLEKHM1-214	ENST00000586084	CASC2	Q6XLA1	102 aa		10.15	□□□□□ -0.78
PLEKHM1-214	ENST00000586084	HCG22	E2RYF7	251 aa		10.12	□□□□□ -0.79
PLEKHM1-214	ENST00000586084	LINC00643	Q86TS7	51 aa		10.11	□□□□□ -0.79
PLEKHM1-214	ENST00000586084	NDUFS5	O43920	106 aa		10.1	□□□□□ -0.79
PLEKHM1-214	ENST00000586084	IGKV2D-30	A0A075B6S6	120 aa		10.07	□□□□□ -0.8
PLEKHM1-214	ENST00000586084	IGKV2-30	P06310	120 aa		10.07	□□□□□ -0.8
PLEKHM1-214	ENST00000586084	C7orf65	Q6ZTY9	151 aa		10.05	□□□□□ -0.8
PLEKHM1-214	ENST00000586084		A6NN06	94 aa		10.04	□□□□□ -0.8
PLEKHM1-214	ENST00000586084		K7ERU9	68 aa		10.03	□□□□□ -0.8
PLEKHM1-214	ENST00000586084	HIST1H4A	P62805	103 aa	Known RBP	10.01	□□□□□ -0.81
PLEKHM1-214	ENST00000586084	FAM236A	A0A1B0GUQ0	79 aa		9.98	□□□□□ -0.81
PLEKHM1-214	ENST00000586084	FAM236B	A0A1B0GV22	79 aa		9.98	□□□□□ -0.81
PLEKHM1-214	ENST00000586084	NEB	P20929	6669 aa		9.97	□□□□□ -0.81
PLEKHM1-214	ENST00000586084	TP53AIP1	Q9HCN2	124 aa		9.97	□□□□□ -0.81
PLEKHM1-214	ENST00000586084		Q5W150	140 aa		9.96	□□□□□ -0.82
PLEKHM1-214	ENST00000586084		Q5VV11	94 aa		9.95	□□□□□ -0.82
PLEKHM1-214	ENST00000586084	C4orf26	Q17RF5	130 aa		9.94	□□□□□ -0.82
PLEKHM1-214	ENST00000586084	MT1B	P07438	61 aa		9.92	□□□□□ -0.82
PLEKHM1-214	ENST00000586084	C5orf47	Q569G3	176 aa		9.92	□□□□□ -0.82
PLEKHM1-214	ENST00000586084	KRTAP20-1	Q3LI63	56 aa		9.9	□□□□□ -0.82
PLEKHM1-214	ENST00000586084	KRTAP19-8	Q3LI54	63 aa		9.86	□□□□□ -0.83
PLEKHM1-214	ENST00000586084		A0A087WVE0	104 aa		9.85	□□□□□ -0.83
PLEKHM1-214	ENST00000586084	SPRR2G	Q9BYE4	73 aa		9.85	□□□□□ -0.83
PLEKHM1-214	ENST00000586084	KRTAP10-5	P60370	271 aa		9.82	□□□□□ -0.84
PLEKHM1-214	ENST00000586084	IMUP	Q9GZP8	106 aa		9.82	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms