RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 ATP5EP56381 51 aaPredicted RBP13.23□□□□□ -0.29
LAMA3-204ENST00000585600 LRP1Q07954 4544 aaKnown RBP13.23□□□□□ -0.29
LAMA3-204ENST00000585600 C5orf47Q569G3 176 aa13.23□□□□□ -0.29
LAMA3-204ENST00000585600 KRTAP29-1A8MX34 341 aaPredicted RBP13.22□□□□□ -0.29
LAMA3-204ENST00000585600 PRR26Q8N8Z3 221 aa13.22□□□□□ -0.29
LAMA3-204ENST00000585600 SERP1Q9Y6X1 66 aa13.2□□□□□ -0.3
LAMA3-204ENST00000585600 MOBPQ13875 183 aa13.19□□□□□ -0.3
LAMA3-204ENST00000585600 FAT3Q8TDW7 4589 aa13.18□□□□□ -0.3
LAMA3-204ENST00000585600 ABCA13Q86UQ4 5058 aa13.18□□□□□ -0.3
LAMA3-204ENST00000585600 OXTP01178 125 aa13.18□□□□□ -0.3
LAMA3-204ENST00000585600 WFDC13Q8IUB5 93 aa13.17□□□□□ -0.3
LAMA3-204ENST00000585600 MYCBP2O75592 4640 aa13.16□□□□□ -0.3
LAMA3-204ENST00000585600 FLG2Q5D862 2391 aaPredicted RBP13.15□□□□□ -0.3
LAMA3-204ENST00000585600 CASC2Q6XLA1 102 aa13.15□□□□□ -0.3
LAMA3-204ENST00000585600 ZCCHC13Q8WW36 166 aaKnown RBP13.15□□□□□ -0.3
LAMA3-204ENST00000585600 NDUFB1O75438 58 aa13.13□□□□□ -0.31
LAMA3-204ENST00000585600 Q96NJ1 140 aa13.13□□□□□ -0.31
LAMA3-204ENST00000585600 TYMSOSQ8TAI1 123 aa13.12□□□□□ -0.31
LAMA3-204ENST00000585600 SSBP3-AS1Q7Z2R9 100 aa13.11□□□□□ -0.31
LAMA3-204ENST00000585600 KRTAP10-8P60410 259 aa13.09□□□□□ -0.31
LAMA3-204ENST00000585600 TNXBP22105 4242 aa13.07□□□□□ -0.32
LAMA3-204ENST00000585600 HRCT1Q6UXD1 115 aa13.06□□□□□ -0.32
LAMA3-204ENST00000585600 MMP24-AS1A0A0U1RRL7 71 aa13.05□□□□□ -0.32
LAMA3-204ENST00000585600 MP68P56378 58 aa13.05□□□□□ -0.32
LAMA3-204ENST00000585600 MT1HL1P0DM35 61 aa13.04□□□□□ -0.32
LAMA3-204ENST00000585600 H3BPC8 53 aa13.02□□□□□ -0.33
LAMA3-204ENST00000585600 ASB16-AS1Q495Z4 193 aa13.02□□□□□ -0.33
LAMA3-204ENST00000585600 hDV103S1A0JD37 113 aa13□□□□□ -0.33
LAMA3-204ENST00000585600 CD164Q04900 197 aa12.99□□□□□ -0.33
LAMA3-204ENST00000585600 SMIM26A0A096LP01 95 aa12.96□□□□□ -0.33
LAMA3-204ENST00000585600 A0A1B0GVX0 72 aa12.96□□□□□ -0.33
LAMA3-204ENST00000585600 LINC00304Q8N9R0 145 aa12.96□□□□□ -0.33
LAMA3-204ENST00000585600 C8orf17Q9NRJ1 99 aa12.95□□□□□ -0.34
LAMA3-204ENST00000585600 Q5XG85 94 aa12.95□□□□□ -0.34
LAMA3-204ENST00000585600 H0Y9P7 68 aa12.94□□□□□ -0.34
LAMA3-204ENST00000585600 LINC00208Q96KT6 92 aa12.93□□□□□ -0.34
LAMA3-204ENST00000585600 TP53AIP1Q9HCN2 124 aa12.92□□□□□ -0.34
LAMA3-204ENST00000585600 TRAV22A0A0B4J277 110 aa12.92□□□□□ -0.34
LAMA3-204ENST00000585600 PCLOQ9Y6V0 5065 aa12.9□□□□□ -0.34
LAMA3-204ENST00000585600 C4orf48Q5BLP8 95 aa12.9□□□□□ -0.34
LAMA3-204ENST00000585600 SPAG11AQ6PDA7 123 aa12.89□□□□□ -0.35
LAMA3-204ENST00000585600 IGHV6-1A0A0B4J1U7 121 aa12.88□□□□□ -0.35
LAMA3-204ENST00000585600 SPINK1P00995 79 aa12.88□□□□□ -0.35
LAMA3-204ENST00000585600 CYP4F30PQ9H0H9 118 aa12.88□□□□□ -0.35
LAMA3-204ENST00000585600 C1orf64Q8NEQ6 169 aa12.84□□□□□ -0.35
LAMA3-204ENST00000585600 C4orf26Q17RF5 130 aa12.83□□□□□ -0.35
LAMA3-204ENST00000585600 FP248Q71RG6 208 aaPredicted RBP12.83□□□□□ -0.36
LAMA3-204ENST00000585600 MRPL34Q9BQ48 92 aaKnown RBP12.83□□□□□ -0.36
LAMA3-204ENST00000585600 J3QL48 77 aa12.81□□□□□ -0.36
LAMA3-204ENST00000585600 SPANXA2-OT1Q8N9U9 137 aa12.81□□□□□ -0.36
LAMA3-204ENST00000585600 SVIPQ8NHG7 77 aa12.81□□□□□ -0.36
LAMA3-204ENST00000585600 RPS29P62273 56 aaKnown RBP12.81□□□□□ -0.36
LAMA3-204ENST00000585600 DMBT1Q9UGM3 2413 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-204ENST00000585600 NOTCH2NLQ7Z3S9 236 aa12.76□□□□□ -0.37
LAMA3-204ENST00000585600 LIMD2Q9BT23 127 aa12.76□□□□□ -0.37
LAMA3-204ENST00000585600 C8orf87E5RJ46 101 aa12.73□□□□□ -0.37
LAMA3-204ENST00000585600 NDUFS5O43920 106 aa12.72□□□□□ -0.37
LAMA3-204ENST00000585600 PRR4Q16378 134 aa12.69□□□□□ -0.38
LAMA3-204ENST00000585600 C1orf195Q5TG92 126 aa12.68□□□□□ -0.38
LAMA3-204ENST00000585600 RETNLBQ9BQ08 111 aa12.67□□□□□ -0.38
LAMA3-204ENST00000585600 IGLV7-46A0A075B6I9 117 aa12.65□□□□□ -0.38
LAMA3-204ENST00000585600 LINC00313P59037 77 aa12.6□□□□□ -0.39
LAMA3-204ENST00000585600 MPLKIPQ8TAP9 179 aa12.58□□□□□ -0.4
LAMA3-204ENST00000585600 Q1T7F1 81 aa12.57□□□□□ -0.4
LAMA3-204ENST00000585600 KRTAP13-3Q3SY46 172 aa12.57□□□□□ -0.4
LAMA3-204ENST00000585600 LOC101927531A0A1B0GV80 90 aa12.56□□□□□ -0.4
LAMA3-204ENST00000585600 PCOTHQ58A44 107 aa12.55□□□□□ -0.4
LAMA3-204ENST00000585600 Q5W150 140 aa12.53□□□□□ -0.4
LAMA3-204ENST00000585600 Q8N9P0 234 aaPredicted RBP12.53□□□□□ -0.4
LAMA3-204ENST00000585600 HERC1Q15751 4861 aa12.53□□□□□ -0.4
LAMA3-204ENST00000585600 V9GYY9 64 aa12.46□□□□□ -0.42
LAMA3-204ENST00000585600 KRTAP16-1A8MUX0 517 aa12.44□□□□□ -0.42
LAMA3-204ENST00000585600 COA5Q86WW8 74 aa12.42□□□□□ -0.42
LAMA3-204ENST00000585600 C9orf92A6NGG3 77 aa12.32□□□□□ -0.44
LAMA3-204ENST00000585600 PRO0628Q9UI54 55 aa12.32□□□□□ -0.44
LAMA3-204ENST00000585600 LPAP08519 4548 aa12.31□□□□□ -0.44
LAMA3-204ENST00000585600 IGKV2-30P06310 120 aa12.3□□□□□ -0.44
LAMA3-204ENST00000585600 HRES1P13985 223 aa12.3□□□□□ -0.44
LAMA3-204ENST00000585600 HMCN2Q8NDA2 5059 aa12.29□□□□□ -0.44
LAMA3-204ENST00000585600 TPRXLQ17RH7 258 aa12.28□□□□□ -0.44
LAMA3-204ENST00000585600 PSPHP1O15172 72 aa12.26□□□□□ -0.45
LAMA3-204ENST00000585600 ACYP2P14621 99 aa12.23□□□□□ -0.45
LAMA3-204ENST00000585600 BRK1Q8WUW1 75 aa12.23□□□□□ -0.45
LAMA3-204ENST00000585600 A8MUN3 132 aa12.22□□□□□ -0.45
LAMA3-204ENST00000585600 DMAC1Q96GE9 116 aa12.19□□□□□ -0.46
LAMA3-204ENST00000585600 XP32Q5T750 250 aa12.18□□□□□ -0.46
LAMA3-204ENST00000585600 Q5VV11 94 aa12.18□□□□□ -0.46
LAMA3-204ENST00000585600 LINC01558Q9Y6Z2 57 aa12.16□□□□□ -0.46
LAMA3-204ENST00000585600 LRP2P98164 4655 aa12.13□□□□□ -0.47
LAMA3-204ENST00000585600 PRR15LQ9BU68 103 aa12.12□□□□□ -0.47
LAMA3-204ENST00000585600 C20orf166-AS1Q96NR2 134 aa12.09□□□□□ -0.47
LAMA3-204ENST00000585600 IGKV2D-30A0A075B6S6 120 aa12.09□□□□□ -0.47
LAMA3-204ENST00000585600 A8MUU9 505 aa12.08□□□□□ -0.48
LAMA3-204ENST00000585600 Q75L30 129 aa12.07□□□□□ -0.48
LAMA3-204ENST00000585600 CHKB-CPT1BH3BT56 60 aa12.04□□□□□ -0.48
LAMA3-204ENST00000585600 RPL37P61927 97 aaKnown RBP12.02□□□□□ -0.48
LAMA3-204ENST00000585600 C7orf65Q6ZTY9 151 aa12□□□□□ -0.49
LAMA3-204ENST00000585600 ATP11AUNQ6ZP68 121 aa11.88□□□□□ -0.51
LAMA3-204ENST00000585600 A6NED7 52 aa11.88□□□□□ -0.51
LAMA3-204ENST00000585600 MUC17Q685J3 4493 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms