RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 SS18L2Q9UHA2 77 aa11.34□□□□□ -0.59
SRSF1-206ENST00000583741 LIMD2Q9BT23 127 aa11.32□□□□□ -0.6
SRSF1-206ENST00000583741 UBL5Q9BZL1 73 aa11.32□□□□□ -0.6
SRSF1-206ENST00000583741 RPS29P62273 56 aaKnown RBP11.31□□□□□ -0.6
SRSF1-206ENST00000583741 XP32Q5T750 250 aa11.31□□□□□ -0.6
SRSF1-206ENST00000583741 NREPQ16612 68 aa11.3□□□□□ -0.6
SRSF1-206ENST00000583741 Q6ZVQ6 151 aa11.29□□□□□ -0.6
SRSF1-206ENST00000583741 Q5XG85 94 aa11.28□□□□□ -0.6
SRSF1-206ENST00000583741 KRTAP19-2Q3LHN2 52 aa11.27□□□□□ -0.6
SRSF1-206ENST00000583741 MT1HP80294 61 aa11.22□□□□□ -0.61
SRSF1-206ENST00000583741 LINC00472Q9H8W2 130 aa11.21□□□□□ -0.61
SRSF1-206ENST00000583741 Q96NJ1 140 aa11.2□□□□□ -0.62
SRSF1-206ENST00000583741 DEFB116Q30KQ4 102 aa11.19□□□□□ -0.62
SRSF1-206ENST00000583741 LINC00643Q86TS7 51 aa11.19□□□□□ -0.62
SRSF1-206ENST00000583741 BPY2O14599 106 aa11.17□□□□□ -0.62
SRSF1-206ENST00000583741 C1orf195Q5TG92 126 aa11.17□□□□□ -0.62
SRSF1-206ENST00000583741 SIGMAR1Q99720 223 aa11.16□□□□□ -0.62
SRSF1-206ENST00000583741 IGKV4-1P06312 121 aa11.14□□□□□ -0.63
SRSF1-206ENST00000583741 J3KT08 172 aa11.13□□□□□ -0.63
SRSF1-206ENST00000583741 ATP5EP2Q5VTU8 51 aa11.13□□□□□ -0.63
SRSF1-206ENST00000583741 PCOTHQ58A44 107 aa11.12□□□□□ -0.63
SRSF1-206ENST00000583741 IGKV3D-7A0A0C4DH55 119 aa11.12□□□□□ -0.63
SRSF1-206ENST00000583741 CXCL6P80162 114 aa11.12□□□□□ -0.63
SRSF1-206ENST00000583741 LORP23490 312 aaPredicted RBP11.09□□□□□ -0.63
SRSF1-206ENST00000583741 DSCR10P59022 87 aa11.08□□□□□ -0.64
SRSF1-206ENST00000583741 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
SRSF1-206ENST00000583741 A8MWP4 228 aa11.06□□□□□ -0.64
SRSF1-206ENST00000583741 KRTAP10-6P60371 365 aaPredicted RBP11.06□□□□□ -0.64
SRSF1-206ENST00000583741 NDUFB1O75438 58 aa11.04□□□□□ -0.64
SRSF1-206ENST00000583741 MT-ATP8P03928 68 aa11.04□□□□□ -0.64
SRSF1-206ENST00000583741 K7EQZ3 153 aa11.03□□□□□ -0.64
SRSF1-206ENST00000583741 Q8N9L7 120 aa11.03□□□□□ -0.64
SRSF1-206ENST00000583741 A0A1B0GVX0 72 aa11□□□□□ -0.65
SRSF1-206ENST00000583741 HIST1H4AP62805 103 aaKnown RBP11□□□□□ -0.65
SRSF1-206ENST00000583741 PRR15Q8IV56 129 aa11□□□□□ -0.65
SRSF1-206ENST00000583741 IGHV6-1A0A0B4J1U7 121 aa10.98□□□□□ -0.65
SRSF1-206ENST00000583741 FLGP20930 4061 aaPredicted RBP10.98□□□□□ -0.65
SRSF1-206ENST00000583741 IMUPQ9GZP8 106 aa10.95□□□□□ -0.66
SRSF1-206ENST00000583741 M0R2T5 61 aa10.92□□□□□ -0.66
SRSF1-206ENST00000583741 A0A087WVE0 104 aa10.91□□□□□ -0.66
SRSF1-206ENST00000583741 C8orf87E5RJ46 101 aa10.9□□□□□ -0.66
SRSF1-206ENST00000583741 C8orf17Q9NRJ1 99 aa10.9□□□□□ -0.66
SRSF1-206ENST00000583741 LINC00313P59037 77 aa10.88□□□□□ -0.67
SRSF1-206ENST00000583741 NOTCH2NLQ7Z3S9 236 aa10.88□□□□□ -0.67
SRSF1-206ENST00000583741 MMP24-AS1A0A0U1RRL7 71 aa10.87□□□□□ -0.67
SRSF1-206ENST00000583741 HCG22E2RYF7 251 aa10.87□□□□□ -0.67
SRSF1-206ENST00000583741 COX6B2Q6YFQ2 88 aa10.85□□□□□ -0.67
SRSF1-206ENST00000583741 WFDC13Q8IUB5 93 aa10.85□□□□□ -0.67
SRSF1-206ENST00000583741 RPL37P61927 97 aaKnown RBP10.84□□□□□ -0.67
SRSF1-206ENST00000583741 CASC2Q6XLA1 102 aa10.83□□□□□ -0.68
SRSF1-206ENST00000583741 hDV103S1A0JD37 113 aa10.82□□□□□ -0.68
SRSF1-206ENST00000583741 TMEM254Q8TBM7 123 aa10.79□□□□□ -0.68
SRSF1-206ENST00000583741 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.69
SRSF1-206ENST00000583741 FAM236AA0A1B0GUQ0 79 aa10.76□□□□□ -0.69
SRSF1-206ENST00000583741 FAM236BA0A1B0GV22 79 aa10.76□□□□□ -0.69
SRSF1-206ENST00000583741 MRPL34Q9BQ48 92 aaKnown RBP10.76□□□□□ -0.69
SRSF1-206ENST00000583741 SSPOA2VEC9 5147 aa10.73□□□□□ -0.69
SRSF1-206ENST00000583741 USH2AO75445 5202 aa10.72□□□□□ -0.69
SRSF1-206ENST00000583741 SCGB1A1P11684 91 aa10.7□□□□□ -0.7
SRSF1-206ENST00000583741 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-206ENST00000583741 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-206ENST00000583741 KRTAP9-7A8MTY7 169 aa10.68□□□□□ -0.7
SRSF1-206ENST00000583741 NDUFS5O43920 106 aa10.68□□□□□ -0.7
SRSF1-206ENST00000583741 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
SRSF1-206ENST00000583741 A8MUU9 505 aa10.64□□□□□ -0.71
SRSF1-206ENST00000583741 ATOX1O00244 68 aa10.62□□□□□ -0.71
SRSF1-206ENST00000583741 Q75L30 129 aa10.61□□□□□ -0.71
SRSF1-206ENST00000583741 TP53AIP1Q9HCN2 124 aa10.6□□□□□ -0.71
SRSF1-206ENST00000583741 OCR1Q9BZK8 76 aa10.59□□□□□ -0.71
SRSF1-206ENST00000583741 SMIM20Q8N5G0 67 aa10.57□□□□□ -0.72
SRSF1-206ENST00000583741 UQCRQO14949 82 aa10.54□□□□□ -0.72
SRSF1-206ENST00000583741 KRTAP9-8Q9BYQ0 159 aa10.54□□□□□ -0.72
SRSF1-206ENST00000583741 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.73
SRSF1-206ENST00000583741 TRAV7A0A075B6U4 112 aa10.51□□□□□ -0.73
SRSF1-206ENST00000583741 ZCCHC13Q8WW36 166 aaKnown RBP10.51□□□□□ -0.73
SRSF1-206ENST00000583741 FCGBPQ9Y6R7 5405 aaPredicted RBP10.49□□□□□ -0.73
SRSF1-206ENST00000583741 Q5W150 140 aa10.49□□□□□ -0.73
SRSF1-206ENST00000583741 TRAV22A0A0B4J277 110 aa10.48□□□□□ -0.73
SRSF1-206ENST00000583741 SERP2Q8N6R1 65 aa10.48□□□□□ -0.73
SRSF1-206ENST00000583741 ANAPC13Q9BS18 74 aa10.48□□□□□ -0.73
SRSF1-206ENST00000583741 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
SRSF1-206ENST00000583741 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
SRSF1-206ENST00000583741 H0Y9P7 68 aa10.44□□□□□ -0.74
SRSF1-206ENST00000583741 C5orf47Q569G3 176 aa10.43□□□□□ -0.74
SRSF1-206ENST00000583741 MP68P56378 58 aa10.41□□□□□ -0.74
SRSF1-206ENST00000583741 COX7CP15954 63 aa10.38□□□□□ -0.75
SRSF1-206ENST00000583741 MT2AP02795 61 aa10.35□□□□□ -0.75
SRSF1-206ENST00000583741 LINC00208Q96KT6 92 aa10.35□□□□□ -0.75
SRSF1-206ENST00000583741 H3BPC8 53 aa10.33□□□□□ -0.76
SRSF1-206ENST00000583741 C1orf64Q8NEQ6 169 aa10.32□□□□□ -0.76
SRSF1-206ENST00000583741 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
SRSF1-206ENST00000583741 LOC101927531A0A1B0GV80 90 aa10.31□□□□□ -0.76
SRSF1-206ENST00000583741 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
SRSF1-206ENST00000583741 LCE2BO14633 110 aa10.3□□□□□ -0.76
SRSF1-206ENST00000583741 KRTAP19-1Q8IUB9 90 aa10.3□□□□□ -0.76
SRSF1-206ENST00000583741 C20orf197Q8N268 126 aa10.3□□□□□ -0.76
SRSF1-206ENST00000583741 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
SRSF1-206ENST00000583741 MT1FP04733 61 aa10.27□□□□□ -0.77
SRSF1-206ENST00000583741 SPINK7P58062 85 aa10.26□□□□□ -0.77
SRSF1-206ENST00000583741 SNURFQ9Y675 71 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms