RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 LOC110117498A0A087WWA1 95 aa4.69□□□□□ -1.66
CDK5RAP3-229ENST00000583697 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
CDK5RAP3-229ENST00000583697 A0A1W2PNM2 257 aa4.69□□□□□ -1.66
CDK5RAP3-229ENST00000583697 RPL37P61927 97 aaKnown RBP4.69□□□□□ -1.66
CDK5RAP3-229ENST00000583697 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
CDK5RAP3-229ENST00000583697 C1orf195Q5TG92 126 aa4.68□□□□□ -1.66
CDK5RAP3-229ENST00000583697 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
CDK5RAP3-229ENST00000583697 Q6ZQT0 140 aa4.68□□□□□ -1.66
CDK5RAP3-229ENST00000583697 CRCT1Q9UGL9 99 aa4.68□□□□□ -1.66
CDK5RAP3-229ENST00000583697 A0A087WSZ3 146 aa4.67□□□□□ -1.66
CDK5RAP3-229ENST00000583697 A0A1B0GW54 56 aa4.67□□□□□ -1.66
CDK5RAP3-229ENST00000583697 M0R2T5 61 aa4.67□□□□□ -1.66
CDK5RAP3-229ENST00000583697 SS18L2Q9UHA2 77 aa4.67□□□□□ -1.66
CDK5RAP3-229ENST00000583697 NREPQ16612 68 aa4.64□□□□□ -1.67
CDK5RAP3-229ENST00000583697 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
CDK5RAP3-229ENST00000583697 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
CDK5RAP3-229ENST00000583697 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
CDK5RAP3-229ENST00000583697 J3QR89 54 aa4.6□□□□□ -1.67
CDK5RAP3-229ENST00000583697 IGKV4-1P06312 121 aa4.59□□□□□ -1.67
CDK5RAP3-229ENST00000583697 ACYP1P07311 99 aa4.59□□□□□ -1.67
CDK5RAP3-229ENST00000583697 DEFB116Q30KQ4 102 aa4.59□□□□□ -1.67
CDK5RAP3-229ENST00000583697 ATP11AUNQ6ZP68 121 aa4.59□□□□□ -1.67
CDK5RAP3-229ENST00000583697 UBL5Q9BZL1 73 aa4.59□□□□□ -1.67
CDK5RAP3-229ENST00000583697 J3KT08 172 aa4.58□□□□□ -1.68
CDK5RAP3-229ENST00000583697 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
CDK5RAP3-229ENST00000583697 NDUFB1O75438 58 aa4.57□□□□□ -1.68
CDK5RAP3-229ENST00000583697 Q75L30 129 aa4.57□□□□□ -1.68
CDK5RAP3-229ENST00000583697 LINC00846Q9NV44 126 aa4.57□□□□□ -1.68
CDK5RAP3-229ENST00000583697 Q96NJ1 140 aa4.56□□□□□ -1.68
CDK5RAP3-229ENST00000583697 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
CDK5RAP3-229ENST00000583697 BPY2O14599 106 aa4.55□□□□□ -1.68
CDK5RAP3-229ENST00000583697 Q6ZVQ6 151 aa4.55□□□□□ -1.68
CDK5RAP3-229ENST00000583697 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
CDK5RAP3-229ENST00000583697 K7ERU9 68 aa4.53□□□□□ -1.68
CDK5RAP3-229ENST00000583697 IGHV6-1A0A0B4J1U7 121 aa4.52□□□□□ -1.69
CDK5RAP3-229ENST00000583697 LINC00313P59037 77 aa4.52□□□□□ -1.69
CDK5RAP3-229ENST00000583697 A8MWP4 228 aa4.51□□□□□ -1.69
CDK5RAP3-229ENST00000583697 A0A1B0GVX0 72 aa4.5□□□□□ -1.69
CDK5RAP3-229ENST00000583697 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
CDK5RAP3-229ENST00000583697 DSCR10P59022 87 aa4.49□□□□□ -1.69
CDK5RAP3-229ENST00000583697 PRR15Q8IV56 129 aa4.49□□□□□ -1.69
CDK5RAP3-229ENST00000583697 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
CDK5RAP3-229ENST00000583697 A8MUU9 505 aa4.48□□□□□ -1.69
CDK5RAP3-229ENST00000583697 C8orf87E5RJ46 101 aa4.48□□□□□ -1.69
CDK5RAP3-229ENST00000583697 CXCL6P80162 114 aa4.48□□□□□ -1.69
CDK5RAP3-229ENST00000583697 LINC00643Q86TS7 51 aa4.48□□□□□ -1.69
CDK5RAP3-229ENST00000583697 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
CDK5RAP3-229ENST00000583697 FAM236DA0A1B0GTK5 79 aa4.46□□□□□ -1.7
CDK5RAP3-229ENST00000583697 K7EQZ3 153 aa4.46□□□□□ -1.7
CDK5RAP3-229ENST00000583697 FAM236CP0DP71 79 aa4.46□□□□□ -1.7
CDK5RAP3-229ENST00000583697 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
CDK5RAP3-229ENST00000583697 Q8N9L7 120 aa4.46□□□□□ -1.7
CDK5RAP3-229ENST00000583697 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
CDK5RAP3-229ENST00000583697 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
CDK5RAP3-229ENST00000583697 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
CDK5RAP3-229ENST00000583697 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
CDK5RAP3-229ENST00000583697 USH2AO75445 5202 aa4.42□□□□□ -1.7
CDK5RAP3-229ENST00000583697 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
CDK5RAP3-229ENST00000583697 HCG22E2RYF7 251 aa4.41□□□□□ -1.7
CDK5RAP3-229ENST00000583697 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
CDK5RAP3-229ENST00000583697 MRPL34Q9BQ48 92 aaKnown RBP4.41□□□□□ -1.7
CDK5RAP3-229ENST00000583697 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
CDK5RAP3-229ENST00000583697 MMP24-AS1A0A0U1RRL7 71 aa4.4□□□□□ -1.71
CDK5RAP3-229ENST00000583697 NDUFS5O43920 106 aa4.4□□□□□ -1.71
CDK5RAP3-229ENST00000583697 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
CDK5RAP3-229ENST00000583697 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
CDK5RAP3-229ENST00000583697 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
CDK5RAP3-229ENST00000583697 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
CDK5RAP3-229ENST00000583697 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
CDK5RAP3-229ENST00000583697 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
CDK5RAP3-229ENST00000583697 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
CDK5RAP3-229ENST00000583697 A0A087WVE0 104 aa4.36□□□□□ -1.71
CDK5RAP3-229ENST00000583697 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
CDK5RAP3-229ENST00000583697 MT-ATP8P03928 68 aa4.36□□□□□ -1.71
CDK5RAP3-229ENST00000583697 MT2AP02795 61 aa4.35□□□□□ -1.71
CDK5RAP3-229ENST00000583697 SCGB1A1P11684 91 aa4.35□□□□□ -1.71
CDK5RAP3-229ENST00000583697 HRES1P13985 223 aa4.35□□□□□ -1.71
CDK5RAP3-229ENST00000583697 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
CDK5RAP3-229ENST00000583697 TP53AIP1Q9HCN2 124 aa4.34□□□□□ -1.71
CDK5RAP3-229ENST00000583697 MPLKIPQ8TAP9 179 aa4.33□□□□□ -1.72
CDK5RAP3-229ENST00000583697 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
CDK5RAP3-229ENST00000583697 MT1FP04733 61 aa4.31□□□□□ -1.72
CDK5RAP3-229ENST00000583697 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
CDK5RAP3-229ENST00000583697 UQCRQO14949 82 aa4.28□□□□□ -1.72
CDK5RAP3-229ENST00000583697 Q5W150 140 aa4.28□□□□□ -1.72
CDK5RAP3-229ENST00000583697 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
CDK5RAP3-229ENST00000583697 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
CDK5RAP3-229ENST00000583697 SPINK7P58062 85 aa4.27□□□□□ -1.73
CDK5RAP3-229ENST00000583697 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
CDK5RAP3-229ENST00000583697 FAM236AA0A1B0GUQ0 79 aa4.26□□□□□ -1.73
CDK5RAP3-229ENST00000583697 FAM236BA0A1B0GV22 79 aa4.26□□□□□ -1.73
CDK5RAP3-229ENST00000583697 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
CDK5RAP3-229ENST00000583697 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
CDK5RAP3-229ENST00000583697 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
CDK5RAP3-229ENST00000583697 TRAV22A0A0B4J277 110 aa4.24□□□□□ -1.73
CDK5RAP3-229ENST00000583697 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
CDK5RAP3-229ENST00000583697 MP68P56378 58 aa4.24□□□□□ -1.73
CDK5RAP3-229ENST00000583697 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
CDK5RAP3-229ENST00000583697 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
CDK5RAP3-229ENST00000583697 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms