RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
MKS1-212ENST00000583577 SPACA4Q8TDM5 124 aa6.08□□□□□ -1.44
MKS1-212ENST00000583577 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
MKS1-212ENST00000583577 PRO0628Q9UI54 55 aa6.08□□□□□ -1.44
MKS1-212ENST00000583577 HRCT1Q6UXD1 115 aa6.07□□□□□ -1.44
MKS1-212ENST00000583577 Q8N9L7 120 aa6.07□□□□□ -1.44
MKS1-212ENST00000583577 ST20-AS1Q8NBB2 130 aa6.07□□□□□ -1.44
MKS1-212ENST00000583577 FAM168BA1KXE4 195 aa6.06□□□□□ -1.44
MKS1-212ENST00000583577 MP68P56378 58 aa6.06□□□□□ -1.44
MKS1-212ENST00000583577 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
MKS1-212ENST00000583577 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
MKS1-212ENST00000583577 PLAC8Q9NZF1 115 aa6.05□□□□□ -1.44
MKS1-212ENST00000583577 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
MKS1-212ENST00000583577 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
MKS1-212ENST00000583577 V9GYY9 64 aa6.04□□□□□ -1.44
MKS1-212ENST00000583577 K7EQZ3 153 aa6.03□□□□□ -1.44
MKS1-212ENST00000583577 UBE2AP49459 152 aa6.03□□□□□ -1.44
MKS1-212ENST00000583577 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
MKS1-212ENST00000583577 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
MKS1-212ENST00000583577 A8MWP4 228 aa6□□□□□ -1.45
MKS1-212ENST00000583577 Q1T7F1 81 aa6□□□□□ -1.45
MKS1-212ENST00000583577 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
MKS1-212ENST00000583577 A0A1W2PNN7 141 aa5.99□□□□□ -1.45
MKS1-212ENST00000583577 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
MKS1-212ENST00000583577 A0A087WSZ3 146 aa5.98□□□□□ -1.45
MKS1-212ENST00000583577 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
MKS1-212ENST00000583577 ZNF706Q9Y5V0 76 aaPredicted RBP5.97□□□□□ -1.45
MKS1-212ENST00000583577 TRAV22A0A0B4J277 110 aa5.96□□□□□ -1.46
MKS1-212ENST00000583577 PRLHP81277 87 aa5.96□□□□□ -1.46
MKS1-212ENST00000583577 C1orf195Q5TG92 126 aa5.96□□□□□ -1.46
MKS1-212ENST00000583577 CASC2Q6XLA1 102 aa5.96□□□□□ -1.46
MKS1-212ENST00000583577 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
MKS1-212ENST00000583577 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
MKS1-212ENST00000583577 MOBPQ13875 183 aa5.94□□□□□ -1.46
MKS1-212ENST00000583577 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
MKS1-212ENST00000583577 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
MKS1-212ENST00000583577 LINC00483Q53H64 154 aa5.92□□□□□ -1.46
MKS1-212ENST00000583577 H0Y9P7 68 aa5.91□□□□□ -1.46
MKS1-212ENST00000583577 PSORS1C2Q9UIG4 136 aa5.91□□□□□ -1.46
MKS1-212ENST00000583577 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
MKS1-212ENST00000583577 FAM229BQ4G0N7 80 aa5.9□□□□□ -1.46
MKS1-212ENST00000583577 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.46
MKS1-212ENST00000583577 LIMD2Q9BT23 127 aa5.9□□□□□ -1.46
MKS1-212ENST00000583577 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
MKS1-212ENST00000583577 KRTAP10-8P60410 259 aa5.88□□□□□ -1.47
MKS1-212ENST00000583577 KRTAP11-1Q8IUC1 163 aa5.88□□□□□ -1.47
MKS1-212ENST00000583577 MPLKIPQ8TAP9 179 aa5.88□□□□□ -1.47
MKS1-212ENST00000583577 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
MKS1-212ENST00000583577 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
MKS1-212ENST00000583577 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
MKS1-212ENST00000583577 IGLV7-46A0A075B6I9 117 aa5.86□□□□□ -1.47
MKS1-212ENST00000583577 IGLV7-43P04211 117 aa5.86□□□□□ -1.47
MKS1-212ENST00000583577 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
MKS1-212ENST00000583577 CD164Q04900 197 aa5.83□□□□□ -1.48
MKS1-212ENST00000583577 DEFB116Q30KQ4 102 aa5.83□□□□□ -1.48
MKS1-212ENST00000583577 C8orf17Q9NRJ1 99 aa5.82□□□□□ -1.48
MKS1-212ENST00000583577 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
MKS1-212ENST00000583577 ZNF861PO60384 105 aa5.81□□□□□ -1.48
MKS1-212ENST00000583577 Q96NJ1 140 aa5.81□□□□□ -1.48
MKS1-212ENST00000583577 A0A0G2JQZ4 141 aa5.8□□□□□ -1.48
MKS1-212ENST00000583577 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
MKS1-212ENST00000583577 LOC101927531A0A1B0GV80 90 aa5.78□□□□□ -1.48
MKS1-212ENST00000583577 C8orf87E5RJ46 101 aa5.78□□□□□ -1.48
MKS1-212ENST00000583577 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
MKS1-212ENST00000583577 SSBP3-AS1Q7Z2R9 100 aa5.77□□□□□ -1.49
MKS1-212ENST00000583577 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
MKS1-212ENST00000583577 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
MKS1-212ENST00000583577 PRR4Q16378 134 aa5.76□□□□□ -1.49
MKS1-212ENST00000583577 Q75L30 129 aa5.75□□□□□ -1.49
MKS1-212ENST00000583577 COA5Q86WW8 74 aa5.75□□□□□ -1.49
MKS1-212ENST00000583577 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
MKS1-212ENST00000583577 Q5VV11 94 aa5.73□□□□□ -1.49
MKS1-212ENST00000583577 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
MKS1-212ENST00000583577 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
MKS1-212ENST00000583577 A8MUN3 132 aa5.71□□□□□ -1.5
MKS1-212ENST00000583577 PSPHP1O15172 72 aa5.71□□□□□ -1.5
MKS1-212ENST00000583577 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
MKS1-212ENST00000583577 PRR26Q8N8Z3 221 aa5.7□□□□□ -1.5
MKS1-212ENST00000583577 NDUFS5O43920 106 aa5.69□□□□□ -1.5
MKS1-212ENST00000583577 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
MKS1-212ENST00000583577 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
MKS1-212ENST00000583577 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
MKS1-212ENST00000583577 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
MKS1-212ENST00000583577 ANAPC11Q9NYG5 84 aa5.67□□□□□ -1.5
MKS1-212ENST00000583577 A0A087X002 238 aa5.66□□□□□ -1.5
MKS1-212ENST00000583577 ACYP2P14621 99 aa5.66□□□□□ -1.5
MKS1-212ENST00000583577 TYMSOSQ8TAI1 123 aa5.66□□□□□ -1.5
MKS1-212ENST00000583577 PCOTHQ58A44 107 aa5.65□□□□□ -1.5
MKS1-212ENST00000583577 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
MKS1-212ENST00000583577 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
MKS1-212ENST00000583577 KRTAP13-2Q52LG2 175 aa5.63□□□□□ -1.51
MKS1-212ENST00000583577 A6NED7 52 aa5.62□□□□□ -1.51
MKS1-212ENST00000583577 HRES1P13985 223 aa5.62□□□□□ -1.51
MKS1-212ENST00000583577 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
MKS1-212ENST00000583577 LINC00313P59037 77 aa5.6□□□□□ -1.51
MKS1-212ENST00000583577 DMAC1Q96GE9 116 aa5.6□□□□□ -1.51
MKS1-212ENST00000583577 LINC00304Q8N9R0 145 aa5.59□□□□□ -1.51
MKS1-212ENST00000583577 C4orf48Q5BLP8 95 aa5.56□□□□□ -1.52
MKS1-212ENST00000583577 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
MKS1-212ENST00000583577 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms