RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
SNX11-212ENST00000583320 CXCL6P80162 114 aa10.17□□□□□ -0.78
SNX11-212ENST00000583320 LINC00472Q9H8W2 130 aa10.16□□□□□ -0.78
SNX11-212ENST00000583320 J3KT08 172 aa10.14□□□□□ -0.79
SNX11-212ENST00000583320 BPY2O14599 106 aa10.14□□□□□ -0.79
SNX11-212ENST00000583320 SIGMAR1Q99720 223 aa10.14□□□□□ -0.79
SNX11-212ENST00000583320 RETNLBQ9BQ08 111 aa10.13□□□□□ -0.79
SNX11-212ENST00000583320 MT-ATP8P03928 68 aa10.12□□□□□ -0.79
SNX11-212ENST00000583320 Q96NJ1 140 aa10.12□□□□□ -0.79
SNX11-212ENST00000583320 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
SNX11-212ENST00000583320 IGKV3D-7A0A0C4DH55 119 aa10.11□□□□□ -0.79
SNX11-212ENST00000583320 DSCR10P59022 87 aa10.06□□□□□ -0.8
SNX11-212ENST00000583320 IGKV4-1P06312 121 aa10.05□□□□□ -0.8
SNX11-212ENST00000583320 TPRXLQ17RH7 258 aa10.04□□□□□ -0.8
SNX11-212ENST00000583320 DEFB116Q30KQ4 102 aa10.04□□□□□ -0.8
SNX11-212ENST00000583320 C1orf195Q5TG92 126 aa10.04□□□□□ -0.8
SNX11-212ENST00000583320 A8MWP4 228 aa10.03□□□□□ -0.8
SNX11-212ENST00000583320 NDUFB1O75438 58 aa10.01□□□□□ -0.81
SNX11-212ENST00000583320 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
SNX11-212ENST00000583320 PRR15Q8IV56 129 aa9.99□□□□□ -0.81
SNX11-212ENST00000583320 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
SNX11-212ENST00000583320 K7EQZ3 153 aa9.98□□□□□ -0.81
SNX11-212ENST00000583320 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
SNX11-212ENST00000583320 Q8N9L7 120 aa9.96□□□□□ -0.82
SNX11-212ENST00000583320 A0A1B0GVX0 72 aa9.95□□□□□ -0.82
SNX11-212ENST00000583320 A0A087WVE0 104 aa9.91□□□□□ -0.82
SNX11-212ENST00000583320 SCGB1A1P11684 91 aa9.91□□□□□ -0.82
SNX11-212ENST00000583320 C8orf87E5RJ46 101 aa9.9□□□□□ -0.82
SNX11-212ENST00000583320 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
SNX11-212ENST00000583320 HCG22E2RYF7 251 aa9.88□□□□□ -0.83
SNX11-212ENST00000583320 FP248Q71RG6 208 aaPredicted RBP9.88□□□□□ -0.83
SNX11-212ENST00000583320 C8orf17Q9NRJ1 99 aa9.87□□□□□ -0.83
SNX11-212ENST00000583320 MMP24-AS1A0A0U1RRL7 71 aa9.85□□□□□ -0.83
SNX11-212ENST00000583320 FAM236AA0A1B0GUQ0 79 aa9.85□□□□□ -0.83
SNX11-212ENST00000583320 FAM236BA0A1B0GV22 79 aa9.85□□□□□ -0.83
SNX11-212ENST00000583320 LINC00313P59037 77 aa9.82□□□□□ -0.84
SNX11-212ENST00000583320 CASC2Q6XLA1 102 aa9.82□□□□□ -0.84
SNX11-212ENST00000583320 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
SNX11-212ENST00000583320 hDV103S1A0JD37 113 aa9.8□□□□□ -0.84
SNX11-212ENST00000583320 KRTAP13-3Q3SY46 172 aa9.8□□□□□ -0.84
SNX11-212ENST00000583320 TMEM254Q8TBM7 123 aa9.8□□□□□ -0.84
SNX11-212ENST00000583320 WFDC13Q8IUB5 93 aa9.79□□□□□ -0.84
SNX11-212ENST00000583320 ATOX1O00244 68 aa9.78□□□□□ -0.84
SNX11-212ENST00000583320 NOTCH2NLQ7Z3S9 236 aa9.78□□□□□ -0.84
SNX11-212ENST00000583320 SMIM20Q8N5G0 67 aa9.75□□□□□ -0.85
SNX11-212ENST00000583320 MRPL34Q9BQ48 92 aaKnown RBP9.75□□□□□ -0.85
SNX11-212ENST00000583320 KRTAP16-1A8MUX0 517 aa9.73□□□□□ -0.85
SNX11-212ENST00000583320 KRTAP19-2Q3LHN2 52 aa9.73□□□□□ -0.85
SNX11-212ENST00000583320 MT1HP80294 61 aa9.71□□□□□ -0.86
SNX11-212ENST00000583320 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
SNX11-212ENST00000583320 Q8N9P0 234 aaPredicted RBP9.69□□□□□ -0.86
SNX11-212ENST00000583320 OCR1Q9BZK8 76 aa9.68□□□□□ -0.86
SNX11-212ENST00000583320 TRAV7A0A075B6U4 112 aa9.67□□□□□ -0.86
SNX11-212ENST00000583320 TP53AIP1Q9HCN2 124 aa9.67□□□□□ -0.86
SNX11-212ENST00000583320 C9orf92A6NGG3 77 aa9.65□□□□□ -0.86
SNX11-212ENST00000583320 UQCRQO14949 82 aa9.64□□□□□ -0.87
SNX11-212ENST00000583320 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
SNX11-212ENST00000583320 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
SNX11-212ENST00000583320 ANAPC13Q9BS18 74 aa9.64□□□□□ -0.87
SNX11-212ENST00000583320 KRTAP9-7A8MTY7 169 aa9.63□□□□□ -0.87
SNX11-212ENST00000583320 NDUFS5O43920 106 aa9.62□□□□□ -0.87
SNX11-212ENST00000583320 C20orf166-AS1Q96NR2 134 aa9.62□□□□□ -0.87
SNX11-212ENST00000583320 A8MUU9 505 aa9.61□□□□□ -0.87
SNX11-212ENST00000583320 KRTAP10-6P60371 365 aaPredicted RBP9.6□□□□□ -0.87
SNX11-212ENST00000583320 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.57□□□□□ -0.88
SNX11-212ENST00000583320 COX7CP15954 63 aa9.57□□□□□ -0.88
SNX11-212ENST00000583320 C5orf47Q569G3 176 aa9.57□□□□□ -0.88
SNX11-212ENST00000583320 XP32Q5T750 250 aa9.57□□□□□ -0.88
SNX11-212ENST00000583320 Q75L30 129 aa9.57□□□□□ -0.88
SNX11-212ENST00000583320 TRAV22A0A0B4J277 110 aa9.52□□□□□ -0.89
SNX11-212ENST00000583320 MP68P56378 58 aa9.5□□□□□ -0.89
SNX11-212ENST00000583320 H3BPC8 53 aa9.49□□□□□ -0.89
SNX11-212ENST00000583320 PCP4P48539 62 aa9.49□□□□□ -0.89
SNX11-212ENST00000583320 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
SNX11-212ENST00000583320 ZCCHC13Q8WW36 166 aaKnown RBP9.49□□□□□ -0.89
SNX11-212ENST00000583320 H0Y9P7 68 aa9.48□□□□□ -0.89
SNX11-212ENST00000583320 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
SNX11-212ENST00000583320 Q5W150 140 aa9.47□□□□□ -0.89
SNX11-212ENST00000583320 SSPOA2VEC9 5147 aa9.45□□□□□ -0.9
SNX11-212ENST00000583320 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
SNX11-212ENST00000583320 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
SNX11-212ENST00000583320 C20orf197Q8N268 126 aa9.42□□□□□ -0.9
SNX11-212ENST00000583320 CCDC179H3BU77 68 aa9.41□□□□□ -0.9
SNX11-212ENST00000583320 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
SNX11-212ENST00000583320 USH2AO75445 5202 aa9.41□□□□□ -0.9
SNX11-212ENST00000583320 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
SNX11-212ENST00000583320 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
SNX11-212ENST00000583320 C1orf64Q8NEQ6 169 aa9.39□□□□□ -0.91
SNX11-212ENST00000583320 M0R2T5 61 aa9.38□□□□□ -0.91
SNX11-212ENST00000583320 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
SNX11-212ENST00000583320 SNURFQ9Y675 71 aa9.34□□□□□ -0.91
SNX11-212ENST00000583320 NDUFC1O43677 76 aa9.32□□□□□ -0.92
SNX11-212ENST00000583320 CYP4F30PQ9H0H9 118 aa9.31□□□□□ -0.92
SNX11-212ENST00000583320 C7orf65Q6ZTY9 151 aa9.3□□□□□ -0.92
SNX11-212ENST00000583320 FCGBPQ9Y6R7 5405 aaPredicted RBP9.29□□□□□ -0.92
SNX11-212ENST00000583320 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
SNX11-212ENST00000583320 SPINK7P58062 85 aa9.24□□□□□ -0.93
SNX11-212ENST00000583320 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
SNX11-212ENST00000583320 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
SNX11-212ENST00000583320 H7BZZ5 65 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms