RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 A0A087WSZ3 146 aa7.99□□□□□ -1.13
SREBF1-221ENST00000583080 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
SREBF1-221ENST00000583080 PRO0461Q9UI25 63 aa7.99□□□□□ -1.13
SREBF1-221ENST00000583080 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
SREBF1-221ENST00000583080 A0A1B0GV72 72 aa7.96□□□□□ -1.14
SREBF1-221ENST00000583080 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
SREBF1-221ENST00000583080 COX6CP09669 75 aa7.94□□□□□ -1.14
SREBF1-221ENST00000583080 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
SREBF1-221ENST00000583080 K7ERJ3 54 aa7.93□□□□□ -1.14
SREBF1-221ENST00000583080 NDUFV3P56181 108 aaKnown RBP7.92□□□□□ -1.14
SREBF1-221ENST00000583080 SCGB1C2P0DMR2 95 aa7.91□□□□□ -1.14
SREBF1-221ENST00000583080 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
SREBF1-221ENST00000583080 ETDBQ3ZM63 59 aa7.91□□□□□ -1.14
SREBF1-221ENST00000583080 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
SREBF1-221ENST00000583080 H3BT86 120 aa7.9□□□□□ -1.14
SREBF1-221ENST00000583080 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
SREBF1-221ENST00000583080 LINC00313P59037 77 aa7.89□□□□□ -1.15
SREBF1-221ENST00000583080 FAM218AQ96MZ4 157 aa7.89□□□□□ -1.15
SREBF1-221ENST00000583080 A0A1W2PNM2 257 aa7.88□□□□□ -1.15
SREBF1-221ENST00000583080 NAA38Q9BRA0 125 aaKnown RBP7.87□□□□□ -1.15
SREBF1-221ENST00000583080 LINC00846Q9NV44 126 aa7.87□□□□□ -1.15
SREBF1-221ENST00000583080 C21orf62-AS1Q17RA5 79 aa7.86□□□□□ -1.15
SREBF1-221ENST00000583080 IGKV4-1P06312 121 aa7.85□□□□□ -1.15
SREBF1-221ENST00000583080 ACYP1P07311 99 aa7.85□□□□□ -1.15
SREBF1-221ENST00000583080 PSMB2P49721 201 aa7.85□□□□□ -1.15
SREBF1-221ENST00000583080 ANKRD29Q8N6D5 301 aa7.84□□□□□ -1.15
SREBF1-221ENST00000583080 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
SREBF1-221ENST00000583080 DEFB116Q30KQ4 102 aa7.81□□□□□ -1.16
SREBF1-221ENST00000583080 KRTAP6-3Q3LI67 103 aa7.8□□□□□ -1.16
SREBF1-221ENST00000583080 H0YGX0 51 aa7.79□□□□□ -1.16
SREBF1-221ENST00000583080 SNCGO76070 127 aa7.79□□□□□ -1.16
SREBF1-221ENST00000583080 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
SREBF1-221ENST00000583080 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
SREBF1-221ENST00000583080 TRACP01848 142 aa7.78□□□□□ -1.16
SREBF1-221ENST00000583080 C9JAW5 83 aa7.77□□□□□ -1.17
SREBF1-221ENST00000583080 LINC00472Q9H8W2 130 aa7.76□□□□□ -1.17
SREBF1-221ENST00000583080 TRBV7-4A0A0J9YYF1 115 aa7.74□□□□□ -1.17
SREBF1-221ENST00000583080 Q8N9P0 234 aaPredicted RBP7.74□□□□□ -1.17
SREBF1-221ENST00000583080 TRIAP1O43715 76 aa7.73□□□□□ -1.17
SREBF1-221ENST00000583080 A0A1B0GX51 115 aa7.72□□□□□ -1.17
SREBF1-221ENST00000583080 A8MWP4 228 aa7.72□□□□□ -1.17
SREBF1-221ENST00000583080 SPINK7P58062 85 aa7.71□□□□□ -1.18
SREBF1-221ENST00000583080 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
SREBF1-221ENST00000583080 GHRHP01286 108 aa7.7□□□□□ -1.18
SREBF1-221ENST00000583080 A0A1B0GVX0 72 aa7.68□□□□□ -1.18
SREBF1-221ENST00000583080 H3BQ85 93 aa7.68□□□□□ -1.18
SREBF1-221ENST00000583080 C8orf87E5RJ46 101 aa7.67□□□□□ -1.18
SREBF1-221ENST00000583080 CCKP06307 115 aa7.67□□□□□ -1.18
SREBF1-221ENST00000583080 WFDC13Q8IUB5 93 aa7.66□□□□□ -1.18
SREBF1-221ENST00000583080 MT-ATP8P03928 68 aa7.65□□□□□ -1.18
SREBF1-221ENST00000583080 LINC00643Q86TS7 51 aa7.65□□□□□ -1.18
SREBF1-221ENST00000583080 ANAPC13Q9BS18 74 aa7.65□□□□□ -1.18
SREBF1-221ENST00000583080 NEBP20929 6669 aa7.65□□□□□ -1.19
SREBF1-221ENST00000583080 ORMDL1Q9P0S3 153 aa7.64□□□□□ -1.19
SREBF1-221ENST00000583080 DNAL4O96015 105 aa7.61□□□□□ -1.19
SREBF1-221ENST00000583080 JMJD7-PLA2G4BH0Y9G9 81 aa7.57□□□□□ -1.2
SREBF1-221ENST00000583080 ATP5EP2Q5VTU8 51 aa7.57□□□□□ -1.2
SREBF1-221ENST00000583080 TMEM256-PLSCR3K7ERE1 68 aa7.56□□□□□ -1.2
SREBF1-221ENST00000583080 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
SREBF1-221ENST00000583080 PDE6GP18545 87 aa7.52□□□□□ -1.21
SREBF1-221ENST00000583080 MUC12Q9UKN1 5478 aa7.52□□□□□ -1.21
SREBF1-221ENST00000583080 J3KT08 172 aa7.51□□□□□ -1.21
SREBF1-221ENST00000583080 ATOX1O00244 68 aa7.51□□□□□ -1.21
SREBF1-221ENST00000583080 UQCRQO14949 82 aa7.5□□□□□ -1.21
SREBF1-221ENST00000583080 C8orf17Q9NRJ1 99 aa7.49□□□□□ -1.21
SREBF1-221ENST00000583080 SVIPQ8NHG7 77 aa7.48□□□□□ -1.21
SREBF1-221ENST00000583080 HIST1H4AP62805 103 aaKnown RBP7.47□□□□□ -1.21
SREBF1-221ENST00000583080 RBM3P98179 157 aaKnown RBP7.47□□□□□ -1.21
SREBF1-221ENST00000583080 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
SREBF1-221ENST00000583080 DSCR8Q96T75 97 aa7.46□□□□□ -1.22
SREBF1-221ENST00000583080 NDUFB1O75438 58 aa7.45□□□□□ -1.22
SREBF1-221ENST00000583080 Q6ZQT0 140 aa7.45□□□□□ -1.22
SREBF1-221ENST00000583080 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
SREBF1-221ENST00000583080 KRTAP20-1Q3LI63 56 aa7.43□□□□□ -1.22
SREBF1-221ENST00000583080 SMIM20Q8N5G0 67 aa7.43□□□□□ -1.22
SREBF1-221ENST00000583080 LOC110117498A0A087WWA1 95 aa7.41□□□□□ -1.22
SREBF1-221ENST00000583080 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
SREBF1-221ENST00000583080 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
SREBF1-221ENST00000583080 A6NN06 94 aa7.41□□□□□ -1.22
SREBF1-221ENST00000583080 COX7CP15954 63 aa7.41□□□□□ -1.22
SREBF1-221ENST00000583080 Q6ZVQ6 151 aa7.41□□□□□ -1.22
SREBF1-221ENST00000583080 A0A1B0GW54 56 aa7.4□□□□□ -1.22
SREBF1-221ENST00000583080 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
SREBF1-221ENST00000583080 MT1BP07438 61 aa7.38□□□□□ -1.23
SREBF1-221ENST00000583080 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
SREBF1-221ENST00000583080 SERP2Q8N6R1 65 aa7.36□□□□□ -1.23
SREBF1-221ENST00000583080 CCDC179H3BU77 68 aa7.35□□□□□ -1.23
SREBF1-221ENST00000583080 TMEM258P61165 79 aa7.34□□□□□ -1.23
SREBF1-221ENST00000583080 MMP24-AS1A0A0U1RRL7 71 aa7.33□□□□□ -1.24
SREBF1-221ENST00000583080 CXCL6P80162 114 aa7.33□□□□□ -1.24
SREBF1-221ENST00000583080 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
SREBF1-221ENST00000583080 TMEM254Q8TBM7 123 aa7.32□□□□□ -1.24
SREBF1-221ENST00000583080 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
SREBF1-221ENST00000583080 C14orf132Q9NPU4 83 aa7.32□□□□□ -1.24
SREBF1-221ENST00000583080 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
SREBF1-221ENST00000583080 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
SREBF1-221ENST00000583080 KRTAP5-9P26371 169 aa7.29□□□□□ -1.24
SREBF1-221ENST00000583080 Q5VV11 94 aa7.29□□□□□ -1.24
SREBF1-221ENST00000583080 NDUFS5O43920 106 aa7.27□□□□□ -1.25
SREBF1-221ENST00000583080 KMT2DO14686 5537 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms